RNA–Protein interactions for RNA: ENST00000554221.5

LINC00520-203, long intergenic non-protein coding RNA 520, humanhuman

TSL 3

Gene LINC00520, Length 348 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-203ENST00000554221 TMEM121BQ9BXQ6 578 aaPredicted RBP7.76□□□□□ -1.17
LINC00520-203ENST00000554221 WDR11Q9BZH6 1224 aa7.76□□□□□ -1.17
LINC00520-203ENST00000554221 VAT1LQ9HCJ6 419 aa7.76□□□□□ -1.17
LINC00520-203ENST00000554221 DIAPH3Q9NSV4 1193 aa7.76□□□□□ -1.17
LINC00520-203ENST00000554221 TCP11L1Q9NUJ3 509 aa7.76□□□□□ -1.17
LINC00520-203ENST00000554221 MROH7Q68CQ1 1323 aa7.76□□□□□ -1.17
LINC00520-203ENST00000554221 CCDC171Q6TFL3 1326 aa7.76□□□□□ -1.17
LINC00520-203ENST00000554221 PLIN4Q96Q06 1357 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 NFIBO00712 420 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 CSF2RAP15509 400 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 CST5P28325 142 aaPredicted RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 CYP2C18P33260 490 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 CCL23P55773 120 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 PSMC6P62333 389 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 SMAD3P84022 425 aaKnown RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 NUCB1Q02818 461 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 PDE4DQ08499 809 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 PDAP1Q13442 181 aaKnown RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 ITGA7Q13683 1181 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 AAMPQ13685 434 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 FSCN1Q16658 493 aaKnown RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 USH1GQ495M9 461 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 MFSD5Q6N075 450 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 TAPT1Q6NXT6 567 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 BTNL9Q6UXG8 535 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 RNF207Q6ZRF8 634 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 ZNF365Q70YC5 407 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 TLK2Q86UE8 772 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 PDCD7Q8N8D1 485 aaKnown RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 MYLIPQ8WY64 445 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 KATNBL1Q9H079 304 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 TRPV6Q9H1D0 765 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 UPF3AQ9H1J1 476 aaKnown RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 RANBP17Q9H2T7 1088 aaKnown RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 CPVLQ9H3G5 476 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 RNF41Q9H4P4 317 aaPredicted RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 KAT14Q9H8E8 782 aa7.75□□□□□ -1.17
LINC00520-203ENST00000554221 GPHNQ9NQX3 736 aaPredicted RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 ADD3Q9UEY8 706 aaKnown RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 GNEQ9Y223 722 aaKnown RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 SUPT16HQ9Y5B9 1047 aaKnown RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 BAZ2AQ9UIF9 1905 aaKnown RBP7.75□□□□□ -1.17
LINC00520-203ENST00000554221 CTAGE5O15320 804 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 DHX16O60231 1041 aaKnown RBP7.74□□□□□ -1.17
LINC00520-203ENST00000554221 KDM4AO75164 1064 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 CABYRO75952 493 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 FGBP02675 491 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 MYL3P08590 195 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 PDHBP11177 359 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 CHRM1P11229 460 aaPredicted RBP7.74□□□□□ -1.17
LINC00520-203ENST00000554221 NOVP48745 357 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 ALDH5A1P51649 535 aaPredicted RBP7.74□□□□□ -1.17
LINC00520-203ENST00000554221 PPIGQ13427 754 aaKnown RBP eCLIP7.74□□□□□ -1.17
LINC00520-203ENST00000554221 TMEM240Q5SV17 173 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 C16orf59Q7L2K0 433 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 IQCA1Q86XH1 822 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 TICAM2Q86XR7 235 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 TBC1D10CQ8IV04 446 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 SMC5Q8IY18 1101 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 OR6J1Q8NGC5 347 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 PPP1R13LQ8WUF5 828 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 PPM1EQ8WY54 764 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 MARVELD3Q96A59 401 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 MPHOSPH6Q99547 160 aaKnown RBP7.74□□□□□ -1.17
LINC00520-203ENST00000554221 VTA1Q9NP79 307 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 ZSWIM5Q9P217 1185 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 Q9Y3F1 56 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 DNAH12Q6ZR08 3092 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 ASTN1O14525 1302 aa7.74□□□□□ -1.17
LINC00520-203ENST00000554221 GRXCR1A8MXD5 290 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 B4E1Z4 1266 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 HIP1O00291 1037 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 CD4P01730 458 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 PCP11498 1178 aaKnown RBP7.73□□□□□ -1.17
LINC00520-203ENST00000554221 FOSL2P15408 326 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 IRX6P78412 446 aaPredicted RBP7.73□□□□□ -1.17
LINC00520-203ENST00000554221 ZNF543Q08ER8 600 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 IMMTQ16891 758 aaKnown RBP7.73□□□□□ -1.17
LINC00520-203ENST00000554221 CCDC178Q5BJE1 867 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 FAM47CQ5HY64 1035 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 GPATCH4Q5T3I0 446 aaKnown RBP7.73□□□□□ -1.17
LINC00520-203ENST00000554221 SLC30A10Q6XR72 485 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 OTOP2Q7RTS6 562 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 DGKHQ86XP1 1220 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 FAM126BQ8IXS8 530 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 ADGRF4Q8IZF3 695 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 PNMA1Q8ND90 353 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 MAFAQ8NHW3 353 aaPredicted RBP7.73□□□□□ -1.17
LINC00520-203ENST00000554221 CLEC4DQ8WXI8 215 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 TBC1D5Q92609 795 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 ZSCAN10Q96SZ4 725 aaPredicted RBP7.73□□□□□ -1.17
LINC00520-203ENST00000554221 TTYH1Q9H313 450 aaPredicted RBP7.73□□□□□ -1.17
LINC00520-203ENST00000554221 HIPK3Q9H422 1215 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 OSBPL3Q9H4L5 887 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 CTNNA3Q9UI47 895 aa7.73□□□□□ -1.17
LINC00520-203ENST00000554221 TBX21Q9UL17 535 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms