RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 NUP133Q8WUM0 1156 aa14.96□□□□□ -0.01
XRCC3-206ENST00000554170 KCNB2Q92953 911 aa14.96□□□□□ -0.01
XRCC3-206ENST00000554170 USP26Q9BXU7 913 aa14.96□□□□□ -0.01
XRCC3-206ENST00000554170 RAVER2Q9HCJ3 691 aaKnown RBP14.96□□□□□ -0.01
XRCC3-206ENST00000554170 STARD7Q9NQZ5 370 aa14.96□□□□□ -0.01
XRCC3-206ENST00000554170 SYNGAP1Q96PV0 1343 aa14.95□□□□□ -0.02
XRCC3-206ENST00000554170 MOXD2PA6NHM9 499 aa14.95□□□□□ -0.02
XRCC3-206ENST00000554170 TIMP1P01033 207 aa14.95□□□□□ -0.02
XRCC3-206ENST00000554170 ADCK5Q3MIX3 580 aa14.95□□□□□ -0.02
XRCC3-206ENST00000554170 CCSAPQ6IQ19 270 aaPredicted RBP14.95□□□□□ -0.02
XRCC3-206ENST00000554170 CCDC174Q6PII3 467 aa14.95□□□□□ -0.02
XRCC3-206ENST00000554170 KLHDC9Q8NEP7 349 aa14.95□□□□□ -0.02
XRCC3-206ENST00000554170 TIFAQ96CG3 184 aa14.95□□□□□ -0.02
XRCC3-206ENST00000554170 ZNF576Q9H609 170 aa14.95□□□□□ -0.02
XRCC3-206ENST00000554170 FBXO40Q9UH90 709 aa14.95□□□□□ -0.02
XRCC3-206ENST00000554170 TBX21Q9UL17 535 aa14.95□□□□□ -0.02
XRCC3-206ENST00000554170 PNMA2Q9UL42 364 aa14.95□□□□□ -0.02
XRCC3-206ENST00000554170 SNX14Q9Y5W7 946 aa14.95□□□□□ -0.02
XRCC3-206ENST00000554170 WDR19Q8NEZ3 1342 aa14.94□□□□□ -0.02
XRCC3-206ENST00000554170 SH2B2O14492 632 aaPredicted RBP14.94□□□□□ -0.02
XRCC3-206ENST00000554170 DHX16O60231 1041 aaKnown RBP14.94□□□□□ -0.02
XRCC3-206ENST00000554170 LIFRP42702 1097 aa14.94□□□□□ -0.02
XRCC3-206ENST00000554170 FGD1P98174 961 aa14.94□□□□□ -0.02
XRCC3-206ENST00000554170 KCNA10Q16322 511 aa14.94□□□□□ -0.02
XRCC3-206ENST00000554170 TKFCQ3LXA3 575 aa14.94□□□□□ -0.02
XRCC3-206ENST00000554170 TJAP1Q5JTD0 557 aa14.94□□□□□ -0.02
XRCC3-206ENST00000554170 BLOC1S2Q6QNY1 142 aa14.94□□□□□ -0.02
XRCC3-206ENST00000554170 SYNE3Q6ZMZ3 975 aa14.94□□□□□ -0.02
XRCC3-206ENST00000554170 CHST13Q8NET6 341 aa14.94□□□□□ -0.02
XRCC3-206ENST00000554170 JAKMIP1Q96N16 626 aaKnown RBP14.94□□□□□ -0.02
XRCC3-206ENST00000554170 UBA5Q9GZZ9 404 aa14.94□□□□□ -0.02
XRCC3-206ENST00000554170 RANBP17Q9H2T7 1088 aaKnown RBP14.94□□□□□ -0.02
XRCC3-206ENST00000554170 LY9Q9HBG7 655 aa14.94□□□□□ -0.02
XRCC3-206ENST00000554170 FAM184BQ9ULE4 1060 aa14.94□□□□□ -0.02
XRCC3-206ENST00000554170 GTF3C3Q9Y5Q9 886 aa14.94□□□□□ -0.02
XRCC3-206ENST00000554170 MROH7Q68CQ1 1323 aa14.93□□□□□ -0.02
XRCC3-206ENST00000554170 CHD9Q3L8U1 2897 aa14.93□□□□□ -0.02
XRCC3-206ENST00000554170 DUSP11O75319 330 aaKnown RBP14.93□□□□□ -0.02
XRCC3-206ENST00000554170 DDAH1O94760 285 aa14.93□□□□□ -0.02
XRCC3-206ENST00000554170 SNAI1O95863 264 aaPredicted RBP14.93□□□□□ -0.02
XRCC3-206ENST00000554170 CALM1P0DP23 149 aa14.93□□□□□ -0.02
XRCC3-206ENST00000554170 CALM2P0DP24 149 aa14.93□□□□□ -0.02
XRCC3-206ENST00000554170 CALM3P0DP25 149 aa14.93□□□□□ -0.02
XRCC3-206ENST00000554170 CST5P28325 142 aaPredicted RBP14.93□□□□□ -0.02
XRCC3-206ENST00000554170 SNAP25P60880 206 aa14.93□□□□□ -0.02
XRCC3-206ENST00000554170 EXOSC10Q01780 885 aaKnown RBP14.93□□□□□ -0.02
XRCC3-206ENST00000554170 GRM4Q14833 912 aa14.93□□□□□ -0.02
XRCC3-206ENST00000554170 MFSD5Q6N075 450 aa14.93□□□□□ -0.02
XRCC3-206ENST00000554170 MAMDC4Q6UXC1 1216 aa14.93□□□□□ -0.02
XRCC3-206ENST00000554170 CTCFLQ8NI51 663 aaPredicted RBP14.93□□□□□ -0.02
XRCC3-206ENST00000554170 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.93□□□□□ -0.02
XRCC3-206ENST00000554170 LRRC2Q9BYS8 371 aa14.93□□□□□ -0.02
XRCC3-206ENST00000554170 SENP2Q9HC62 589 aa14.93□□□□□ -0.02
XRCC3-206ENST00000554170 ZHX1Q9UKY1 873 aaPredicted RBP14.93□□□□□ -0.02
XRCC3-206ENST00000554170 SLC12A7Q9Y666 1083 aa14.93□□□□□ -0.02
XRCC3-206ENST00000554170 ELP1O95163 1332 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 BDP1A6H8Y1 2624 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 DNAJC25-GNG10A0A024R161 153 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 MYADML2A6NDP7 307 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 KLRF2D3W0D1 207 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 ICAM1P05362 532 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 ALAS1P13196 640 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 KIF5BP33176 963 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 TROAPQ12815 778 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 ZNF467Q7Z7K2 595 aaPredicted RBP14.92□□□□□ -0.02
XRCC3-206ENST00000554170 ZNF654Q8IZM8 581 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 DDX11Q96FC9 970 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 AGBL1Q96MI9 1066 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 GLT1D1Q96MS3 346 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 MAP3K14Q99558 947 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 GPHNQ9NQX3 736 aaPredicted RBP14.92□□□□□ -0.02
XRCC3-206ENST00000554170 CCPG1Q9ULG6 757 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 RIPK3Q9Y572 518 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 ZNF536O15090 1300 aa14.92□□□□□ -0.02
XRCC3-206ENST00000554170 PALM3A6NDB9 673 aaPredicted RBP14.91□□□□□ -0.02
XRCC3-206ENST00000554170 TNFRSF10AO00220 468 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 CDK7P50613 346 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 PPIGQ13427 754 aaKnown RBP eCLIP14.91□□□□□ -0.022e-9■□□□□ 9.2
XRCC3-206ENST00000554170 TMEM240Q5SV17 173 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 RASIP1Q5U651 963 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 C16orf59Q7L2K0 433 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 SGMS1Q86VZ5 419 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 ADGRF4Q8IZF3 695 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 ANKRD35Q8N283 1001 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 STAG2Q8N3U4 1231 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 PCSK9Q8NBP7 692 aaKnown RBP14.91□□□□□ -0.02
XRCC3-206ENST00000554170 TCEANC2Q96MN5 208 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 TRERF1Q96PN7 1200 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 PBX4Q9BYU1 374 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 ACAD9Q9H845 621 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 VAT1LQ9HCJ6 419 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 HOMER2Q9NSB8 354 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 RNF146Q9NTX7 359 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 MAD2L2Q9UI95 211 aa14.91□□□□□ -0.02
XRCC3-206ENST00000554170 ADCY6O43306 1168 aa14.9□□□□□ -0.02
XRCC3-206ENST00000554170 C6orf222P0C671 652 aaPredicted RBP14.9□□□□□ -0.02
XRCC3-206ENST00000554170 CSF2RAP15509 400 aa14.9□□□□□ -0.02
XRCC3-206ENST00000554170 CASTP20810 708 aaKnown RBP14.9□□□□□ -0.02
XRCC3-206ENST00000554170 PBX2P40425 430 aa14.9□□□□□ -0.02
XRCC3-206ENST00000554170 GNAQP50148 359 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms