RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 HDGFL2Q7Z4V5 671 aaPredicted RBP10.53□□□□□ -0.72
SIX4-202ENST00000554079 NCSTNQ92542 709 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 ATP8A2Q9NTI2 1148 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 SPATA7Q9P0W8 599 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 KCNH3Q9ULD8 1083 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 TMEM98Q9Y2Y6 226 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 MST1RQ04912 1400 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 PDHA1P08559 390 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 CYP11B2P19099 503 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 KRT9P35527 623 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 BPIFB4P59827 614 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 KLC1Q07866 573 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 BIRC3Q13489 604 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 CUL4BQ13620 913 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 AGBL2Q5U5Z8 902 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 C8orf74Q6P047 294 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 DHX32Q7L7V1 743 aaKnown RBP10.53□□□□□ -0.72
SIX4-202ENST00000554079 TRPM8Q7Z2W7 1104 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 CACNA2D4Q7Z3S7 1137 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 PIGWQ7Z7B1 504 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 IFT20Q8IY31 132 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 CHMP6Q96FZ7 201 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 ZNF274Q96GC6 653 aaPredicted RBP10.53□□□□□ -0.72
SIX4-202ENST00000554079 ZNF317Q96PQ6 595 aaPredicted RBP10.53□□□□□ -0.72
SIX4-202ENST00000554079 FSD1Q9BTV5 496 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 FAM129AQ9BZQ8 928 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 LACRTQ9GZZ8 138 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 JADE2Q9NQC1 790 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 SEC31BQ9NQW1 1179 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 TUBGCP4Q9UGJ1 667 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 MYH6P13533 1939 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 PALM3A6NDB9 673 aaPredicted RBP10.52□□□□□ -0.73
SIX4-202ENST00000554079 ASAP2O43150 1006 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 KRT86O43790 486 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 GLI1P08151 1106 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 ACADSP16219 412 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 PRLRP16471 622 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 FAM133BQ5BKY9 247 aaKnown RBP10.52□□□□□ -0.73
SIX4-202ENST00000554079 ANKRD24Q8TF21 1146 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 WHAMMQ8TF30 809 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 CENPTQ96BT3 561 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 IWS1Q96ST2 819 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 MAP3K14Q99558 947 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 NUP88Q99567 741 aaPredicted RBP10.52□□□□□ -0.73
SIX4-202ENST00000554079 INCENPQ9NQS7 918 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 CWC25Q9NXE8 425 aaPredicted RBP10.52□□□□□ -0.73
SIX4-202ENST00000554079 DLGAP2Q9P1A6 1054 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 CTNNAL1Q9UBT7 734 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 ZNF609O15014 1411 aa10.52□□□□□ -0.73
SIX4-202ENST00000554079 ZSCAN5CA6NGD5 496 aaPredicted RBP10.51□□□□□ -0.73
SIX4-202ENST00000554079 SH2B2O14492 632 aaPredicted RBP10.51□□□□□ -0.73
SIX4-202ENST00000554079 FLOT1O75955 427 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 UBOX5O94941 541 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 MSH2P43246 934 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 GUCY2FP51841 1108 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 PPARDQ03181 441 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 PLS1Q14651 629 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 GALNTL6Q49A17 601 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 ERMARDQ5T6L9 678 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 ANKS4BQ8N8V4 417 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 SPATA20Q8TB22 786 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 CASKIN2Q8WXE0 1202 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 FAM136AQ96C01 138 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 XPO6Q96QU8 1125 aaKnown RBP10.51□□□□□ -0.73
SIX4-202ENST00000554079 ARHGEF3Q9NR81 526 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 ABCF3Q9NUQ8 709 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 SMARCAL1Q9NZC9 954 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 EHD2Q9NZN4 543 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 NKX1-2Q9UD57 310 aaPredicted RBP10.51□□□□□ -0.73
SIX4-202ENST00000554079 MON2Q7Z3U7 1717 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 GOLGA6L10A0A0M3HER8 536 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 E7ENQ6 273 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 GCOM1H8Y6P7 765 aaPredicted RBP10.51□□□□□ -0.73
SIX4-202ENST00000554079 E2F6O75461 281 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 MYZAPP0CAP1 466 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 FAM200BP0CF97 657 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 CD44P16070 742 aaKnown RBP10.51□□□□□ -0.73
SIX4-202ENST00000554079 PCK1P35558 622 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 MATR3P43243 847 aaKnown RBP eCLIP10.51□□□□□ -0.73
SIX4-202ENST00000554079 ZNF844Q08AG5 666 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 UAP1Q16222 522 aaPredicted RBP10.51□□□□□ -0.73
SIX4-202ENST00000554079 BEND3Q5T5X7 828 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 IRGCQ6NXR0 463 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 WDR59Q6PJI9 974 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 GBP7Q8N8V2 638 aaPredicted RBP10.51□□□□□ -0.73
SIX4-202ENST00000554079 LZICQ8WZA0 190 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 ARPC5LQ9BPX5 153 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 ECT2Q9H8V3 914 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 GJB4Q9NTQ9 266 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 RBM12Q9NTZ6 932 aaKnown RBP10.51□□□□□ -0.73
SIX4-202ENST00000554079 SWAP70Q9UH65 585 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 LIMA1Q9UHB6 759 aaKnown RBP10.51□□□□□ -0.73
SIX4-202ENST00000554079 ZMYND8Q9ULU4 1186 aaPredicted RBP10.51□□□□□ -0.73
SIX4-202ENST00000554079 NWD2Q9ULI1 1742 aa10.51□□□□□ -0.73
SIX4-202ENST00000554079 PRC1O43663 620 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 USO1O60763 962 aaKnown RBP10.5□□□□□ -0.73
SIX4-202ENST00000554079 GSTA2P09210 222 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 CCDC166P0CW27 439 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 NAT1P18440 290 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms