RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 VTA1Q9NP79 307 aa13.92□□□□□ -0.18
TRAPPC6B-204ENST00000554018 TMEM39AQ9NV64 488 aa13.92□□□□□ -0.18
TRAPPC6B-204ENST00000554018 PNMA2Q9UL42 364 aa13.92□□□□□ -0.18
TRAPPC6B-204ENST00000554018 GNEQ9Y223 722 aaKnown RBP13.92□□□□□ -0.18
TRAPPC6B-204ENST00000554018 PRUNE2Q8WUY3 3088 aa13.92□□□□□ -0.18
TRAPPC6B-204ENST00000554018 RAD50Q92878 1312 aa13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 CHD9Q3L8U1 2897 aa13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 DCDC2CA8MYV0 355 aa13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 RAG1P15918 1043 aa13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 CDK7P50613 346 aa13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 RPS6P62753 249 aaKnown RBP13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 CDC37Q16543 378 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 FSCN1Q16658 493 aaKnown RBP13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 KIAA1211Q6ZU35 1233 aa13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 CYB5R4Q7L1T6 521 aa13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 ADGRF4Q8IZF3 695 aa13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 RUFY2Q8WXA3 655 aa13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 UBAC1Q9BSL1 405 aa13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 AP5M1Q9H0R1 490 aa13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 MYH7BA7E2Y1 1941 aa13.91□□□□□ -0.18
TRAPPC6B-204ENST00000554018 A0A0U1RQG5 324 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC6B-204ENST00000554018 ARVCFO00192 962 aa13.9□□□□□ -0.18
TRAPPC6B-204ENST00000554018 CYP21A2P08686 494 aa13.9□□□□□ -0.18
TRAPPC6B-204ENST00000554018 PARP1P09874 1014 aaKnown RBP13.9□□□□□ -0.18
TRAPPC6B-204ENST00000554018 EPHB4P54760 987 aa13.9□□□□□ -0.18
TRAPPC6B-204ENST00000554018 SEC23AQ15436 765 aa13.9□□□□□ -0.18
TRAPPC6B-204ENST00000554018 ASPRV1Q53RT3 343 aa13.9□□□□□ -0.18
TRAPPC6B-204ENST00000554018 IFIT1BQ5T764 474 aaKnown RBP13.9□□□□□ -0.18
TRAPPC6B-204ENST00000554018 CXCL17Q6UXB2 119 aa13.9□□□□□ -0.18
TRAPPC6B-204ENST00000554018 TBC1D5Q92609 795 aa13.9□□□□□ -0.18
TRAPPC6B-204ENST00000554018 VAT1LQ9HCJ6 419 aa13.9□□□□□ -0.18
TRAPPC6B-204ENST00000554018 TAF6LQ9Y6J9 622 aa13.9□□□□□ -0.18
TRAPPC6B-204ENST00000554018 SGSM2O43147 1006 aa13.89□□□□□ -0.19
TRAPPC6B-204ENST00000554018 DHX16O60231 1041 aaKnown RBP13.89□□□□□ -0.19
TRAPPC6B-204ENST00000554018 DUSP28Q4G0W2 176 aa13.89□□□□□ -0.19
TRAPPC6B-204ENST00000554018 RGS22Q8NE09 1264 aa13.89□□□□□ -0.19
TRAPPC6B-204ENST00000554018 WDR11Q9BZH6 1224 aa13.89□□□□□ -0.19
TRAPPC6B-204ENST00000554018 JMJD4Q9H9V9 463 aa13.89□□□□□ -0.19
TRAPPC6B-204ENST00000554018 TBX21Q9UL17 535 aa13.89□□□□□ -0.19
TRAPPC6B-204ENST00000554018 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC6B-204ENST00000554018 MROH7Q68CQ1 1323 aa13.89□□□□□ -0.19
TRAPPC6B-204ENST00000554018 LOC102724159A0A0B4J2E5 919 aa13.88□□□□□ -0.19
TRAPPC6B-204ENST00000554018 RBM47A0AV96 593 aaKnown RBP13.88□□□□□ -0.19
TRAPPC6B-204ENST00000554018 TIMP1P01033 207 aa13.88□□□□□ -0.19
TRAPPC6B-204ENST00000554018 FPGSQ05932 587 aa13.88□□□□□ -0.19
TRAPPC6B-204ENST00000554018 PDE4DQ08499 809 aa13.88□□□□□ -0.19
TRAPPC6B-204ENST00000554018 TRDNQ13061 729 aa13.88□□□□□ -0.19
TRAPPC6B-204ENST00000554018 PWP2Q15269 919 aaKnown RBP13.88□□□□□ -0.19
TRAPPC6B-204ENST00000554018 QRICH1Q2TAL8 776 aa13.88□□□□□ -0.19
TRAPPC6B-204ENST00000554018 STAG2Q8N3U4 1231 aa13.88□□□□□ -0.19
TRAPPC6B-204ENST00000554018 MTMR10Q9NXD2 777 aa13.88□□□□□ -0.19
TRAPPC6B-204ENST00000554018 Q9Y3F1 56 aa13.88□□□□□ -0.19
TRAPPC6B-204ENST00000554018 GRIN2DO15399 1336 aa13.88□□□□□ -0.19
TRAPPC6B-204ENST00000554018 ABCB11O95342 1321 aa13.88□□□□□ -0.19
TRAPPC6B-204ENST00000554018 SCN10AQ9Y5Y9 1956 aa13.87□□□□□ -0.19
TRAPPC6B-204ENST00000554018 ZEB2O60315 1214 aa13.87□□□□□ -0.19
TRAPPC6B-204ENST00000554018 CABYRO75952 493 aa13.87□□□□□ -0.19
TRAPPC6B-204ENST00000554018 EDNRBP24530 442 aa13.87□□□□□ -0.19
TRAPPC6B-204ENST00000554018 FAM126BQ8IXS8 530 aa13.87□□□□□ -0.19
TRAPPC6B-204ENST00000554018 SLC43A3Q8NBI5 491 aa13.87□□□□□ -0.19
TRAPPC6B-204ENST00000554018 DNERQ8NFT8 737 aa13.87□□□□□ -0.19
TRAPPC6B-204ENST00000554018 SENP2Q9HC62 589 aa13.87□□□□□ -0.19
TRAPPC6B-204ENST00000554018 TRIP12Q14669 1992 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 KLRF2D3W0D1 207 aa13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 E7EWF7 191 aa13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 IFIT3O14879 490 aaKnown RBP13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 PSMC6P62333 389 aa13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 ITGA7Q13683 1181 aa13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 STOX1Q6ZVD7 989 aa13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 CHST3Q7LGC8 479 aa13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 FBXO11Q86XK2 927 aa13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 SYTL5Q8TDW5 730 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 TAAR1Q96RJ0 339 aa13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 MPHOSPH6Q99547 160 aaKnown RBP13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 COL20A1Q9P218 1284 aa13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 MAD2L2Q9UI95 211 aa13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 CHD7Q9P2D1 2997 aa13.86□□□□□ -0.19
TRAPPC6B-204ENST00000554018 PALM3A6NDB9 673 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 TLR3O15455 904 aaKnown RBP13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 CD4P01730 458 aa13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 SLC35G1Q2M3R5 365 aa13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 FAM109BQ6ICB4 259 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 MFSD5Q6N075 450 aa13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 RALYLQ86SE5 291 aaKnown RBP13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 SKAP1Q86WV1 359 aa13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 OR6J1Q8NGC5 347 aa13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 SCFD2Q8WU76 684 aa13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 COPS5Q92905 334 aa13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 MAP4K1Q92918 833 aa13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 RNPC3Q96LT9 517 aaKnown RBP13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 FAM161BQ96MY7 647 aa13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 PPP1R12CQ9BZL4 782 aa13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 TRPV6Q9H1D0 765 aa13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 MRPL11Q9Y3B7 192 aaKnown RBP13.85□□□□□ -0.19
TRAPPC6B-204ENST00000554018 B4DLN1 442 aa13.84□□□□□ -0.19
TRAPPC6B-204ENST00000554018 PPP1R11O60927 126 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC6B-204ENST00000554018 MYL3P08590 195 aa13.84□□□□□ -0.19
TRAPPC6B-204ENST00000554018 CYP2C18P33260 490 aa13.84□□□□□ -0.19
TRAPPC6B-204ENST00000554018 MRPL12P52815 198 aaKnown RBP13.84□□□□□ -0.19
TRAPPC6B-204ENST00000554018 GRM4Q14833 912 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms