RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ZNF579Q8NAF0 562 aaKnown RBP10.42□□□□□ -0.74
TDP1-208ENST00000553989 PI4K2BQ8TCG2 481 aa10.42□□□□□ -0.74
TDP1-208ENST00000553989 OTUD7AQ8TE49 926 aaPredicted RBP10.42□□□□□ -0.74
TDP1-208ENST00000553989 KATNBL1Q9H079 304 aa10.42□□□□□ -0.74
TDP1-208ENST00000553989 PRDM12Q9H4Q4 367 aa10.42□□□□□ -0.74
TDP1-208ENST00000553989 IL23AQ9NPF7 189 aa10.42□□□□□ -0.74
TDP1-208ENST00000553989 GNEQ9Y223 722 aaKnown RBP10.42□□□□□ -0.74
TDP1-208ENST00000553989 DDX49Q9Y6V7 483 aaKnown RBP10.42□□□□□ -0.74
TDP1-208ENST00000553989 ASTN1O14525 1302 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 PTPDC1A2A3K4 754 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 ZBBXA8MT70 800 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 CTAGE5O15320 804 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 FGBP02675 491 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 IGFBP4P22692 258 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 PTGS1P23219 599 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 CCL23P55773 120 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 PSMC6P62333 389 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 TJAP1Q5JTD0 557 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 C16orf59Q7L2K0 433 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 OTOP2Q7RTS6 562 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 USP38Q8NB14 1042 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 VTA1Q9NP79 307 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 INCENPQ9NQS7 918 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 PDGFCQ9NRA1 345 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 CYP39A1Q9NYL5 469 aa10.41□□□□□ -0.74
TDP1-208ENST00000553989 UMODL1Q5DID0 1318 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 FRMPD2Q68DX3 1309 aaPredicted RBP10.4□□□□□ -0.74
TDP1-208ENST00000553989 B4GALT4O60513 344 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 PLA2G6O60733 806 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 CD4P01730 458 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 ICAM1P05362 532 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 SLC16A2P36021 539 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 PSEN1P49768 467 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 IQSEC1Q6DN90 963 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 IL27Q8NEV9 243 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 DCAF4Q8WV16 495 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 HERVK_113Q902F9 699 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 PURBQ96QR8 312 aaKnown RBP10.4□□□□□ -0.74
TDP1-208ENST00000553989 SEZ6LQ9BYH1 1024 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 TRPV6Q9H1D0 765 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 NKX2-4Q9H2Z4 354 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 SLC28A3Q9HAS3 691 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 GPCPD1Q9NPB8 672 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 GPHNQ9NQX3 736 aaPredicted RBP10.4□□□□□ -0.74
TDP1-208ENST00000553989 IL17RBQ9NRM6 502 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 ADD3Q9UEY8 706 aaKnown RBP10.4□□□□□ -0.74
TDP1-208ENST00000553989 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.4□□□□□ -0.74
TDP1-208ENST00000553989 PCDHB15Q9Y5E8 787 aa10.4□□□□□ -0.74
TDP1-208ENST00000553989 MYL3P08590 195 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 CALML3P27482 149 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 ALDH5A1P51649 535 aaPredicted RBP10.39□□□□□ -0.75
TDP1-208ENST00000553989 NKX3-2P78367 333 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 BAATQ14032 418 aaPredicted RBP10.39□□□□□ -0.75
TDP1-208ENST00000553989 CCDC85BQ15834 202 aaPredicted RBP10.39□□□□□ -0.75
TDP1-208ENST00000553989 BRDTQ58F21 947 aaPredicted RBP10.39□□□□□ -0.75
TDP1-208ENST00000553989 FAM47CQ5HY64 1035 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 ANKRD45Q5TZF3 282 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 RASIP1Q5U651 963 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 VPS53Q5VIR6 699 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 SYDE2Q5VT97 1194 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 TTBK2Q6IQ55 1244 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 TAPT1Q6NXT6 567 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 RPUSD2Q8IZ73 545 aaKnown RBP10.39□□□□□ -0.75
TDP1-208ENST00000553989 MICALL1Q8N3F8 863 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 EVI5LQ96CN4 794 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 MPHOSPH6Q99547 160 aaKnown RBP10.39□□□□□ -0.75
TDP1-208ENST00000553989 WDR11Q9BZH6 1224 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 PRDM6Q9NQX0 595 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 CXXC1Q9P0U4 656 aaPredicted RBP10.39□□□□□ -0.75
TDP1-208ENST00000553989 THEGQ9P2T0 379 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 Q9Y3F1 56 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 SLC4A7Q9Y6M7 1214 aa10.39□□□□□ -0.75
TDP1-208ENST00000553989 LRRC37A2A6NM11 1700 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 RAD50Q92878 1312 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 CDH23Q9H251 3354 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 NFIBO00712 420 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 ORC4O43929 436 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 SUPT20HL2P0C7V6 817 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 TOP1P11387 765 aaKnown RBP10.38□□□□□ -0.75
TDP1-208ENST00000553989 CPT1AP50416 773 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 CHMP4BP1P59074 171 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 PDE4DQ08499 809 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 DUSP28Q4G0W2 176 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 PPP2R2DQ66LE6 453 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 SLC43A3Q8NBI5 491 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 OR6J1Q8NGC5 347 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 SCLYQ96I15 445 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 NOC4LQ9BVI4 516 aaKnown RBP10.38□□□□□ -0.75
TDP1-208ENST00000553989 MFRPQ9BY79 579 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 ALDH8A1Q9H2A2 487 aaPredicted RBP10.38□□□□□ -0.75
TDP1-208ENST00000553989 RANBP17Q9H2T7 1088 aaKnown RBP10.38□□□□□ -0.75
TDP1-208ENST00000553989 HELLSQ9NRZ9 838 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 POLR3EQ9NVU0 708 aa10.38□□□□□ -0.75
TDP1-208ENST00000553989 GRIN2DO15399 1336 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 EYSQ5T1H1 3165 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 TNFRSF10AO00220 468 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 FOXP2O15409 715 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 CYP2C9P11712 490 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 RABGGTBP53611 331 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms