RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 LCTP09848 1927 aa16.58■□□□□ 0.24
SHMT2-210ENST00000553950 ZNFX1Q9P2E3 1918 aaKnown RBP16.58■□□□□ 0.24
SHMT2-210ENST00000553950 M0R2N6 131 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 CA12O43570 354 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 TLR2O60603 784 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 CNMDO75829 334 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 BMP15O95972 392 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 KRT85P78386 507 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 MYSM1Q5VVJ2 828 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 RNF207Q6ZRF8 634 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 NCAPG2Q86XI2 1143 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 CLEC4DQ8WXI8 215 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 TNFRSF25Q93038 417 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 MOV10L1Q9BXT6 1211 aaKnown RBP16.57■□□□□ 0.24
SHMT2-210ENST00000553950 RBPJLQ9UBG7 517 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 CFAP45Q9UL16 551 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 PCDHA6Q9UN73 950 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 ZDHHC9Q9Y397 364 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 PCDHA8Q9Y5H6 950 aa16.57■□□□□ 0.24
SHMT2-210ENST00000553950 NFIBO00712 420 aa16.56■□□□□ 0.24
SHMT2-210ENST00000553950 OPLAHO14841 1288 aa16.56■□□□□ 0.24
SHMT2-210ENST00000553950 MAPK4P31152 587 aa16.56■□□□□ 0.24
SHMT2-210ENST00000553950 C1QTNF8P60827 252 aa16.56■□□□□ 0.24
SHMT2-210ENST00000553950 NR5A1Q13285 461 aa16.56■□□□□ 0.24
SHMT2-210ENST00000553950 ANKRD13CQ8N6S4 541 aa16.56■□□□□ 0.24
SHMT2-210ENST00000553950 MPHOSPH6Q99547 160 aaKnown RBP16.56■□□□□ 0.24
SHMT2-210ENST00000553950 CFHR5Q9BXR6 569 aa16.56■□□□□ 0.24
SHMT2-210ENST00000553950 TXNRD2Q9NNW7 524 aa16.56■□□□□ 0.24
SHMT2-210ENST00000553950 CEP131Q9UPN4 1083 aa16.56■□□□□ 0.24
SHMT2-210ENST00000553950 IVNS1ABPQ9Y6Y0 642 aa16.56■□□□□ 0.24
SHMT2-210ENST00000553950 CASP8AP2Q9UKL3 1982 aa16.56■□□□□ 0.24
SHMT2-210ENST00000553950 B4DLN1 442 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 KIF28PB7ZC32 967 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 MEIS2O14770 477 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 BCRP11274 1271 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 GCFC2P16383 781 aaKnown RBP16.55■□□□□ 0.24
SHMT2-210ENST00000553950 ERCC3P19447 782 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 KCTD2Q14681 263 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 UBE2SQ16763 222 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 MUM1L1Q5H9M0 696 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 FOXD4L5Q5VV16 416 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-210ENST00000553950 NSMFQ6X4W1 530 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 PIK3AP1Q6ZUJ8 805 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 ABRAQ8N0Z2 381 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 ANKRD35Q8N283 1001 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 OXER1Q8TDS5 423 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 FOXD4L4Q8WXT5 416 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-210ENST00000553950 TNPO1Q92973 898 aaKnown RBP16.55■□□□□ 0.24
SHMT2-210ENST00000553950 ANO3Q9BYT9 981 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 LRRC37A2A6NM11 1700 aa16.55■□□□□ 0.24
SHMT2-210ENST00000553950 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 LOC102724159A0A0B4J2E5 919 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 GOLGA6L22H0YM25 854 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 STRNO43815 780 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 AOC2O75106 756 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 FCER1AP12319 257 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 VEGFBP49765 207 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 RPS6P62753 249 aaKnown RBP16.54■□□□□ 0.24
SHMT2-210ENST00000553950 CRHR2Q13324 411 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 PWP2Q15269 919 aaKnown RBP16.54■□□□□ 0.24
SHMT2-210ENST00000553950 JAKMIP3Q5VZ66 844 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 CLEC17AQ6ZS10 378 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 NEK8Q86SG6 692 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 DNERQ8NFT8 737 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 MMP19Q99542 508 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 A1CFQ9NQ94 594 aaKnown RBP16.54■□□□□ 0.24
SHMT2-210ENST00000553950 SAGE1Q9NXZ1 904 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 CYP39A1Q9NYL5 469 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 BIN2Q9UBW5 565 aaPredicted RBP16.54■□□□□ 0.24
SHMT2-210ENST00000553950 RIPK3Q9Y572 518 aa16.54■□□□□ 0.24
SHMT2-210ENST00000553950 SREBF1P36956 1147 aa16.53■□□□□ 0.24
SHMT2-210ENST00000553950 WDR78Q5VTH9 848 aa16.53■□□□□ 0.24
SHMT2-210ENST00000553950 XRRA1Q6P2D8 792 aa16.53■□□□□ 0.24
SHMT2-210ENST00000553950 USP17L6PQ6QN14 398 aa16.53■□□□□ 0.24
SHMT2-210ENST00000553950 MOXD1Q6UVY6 613 aa16.53■□□□□ 0.24
SHMT2-210ENST00000553950 C17orf99Q6UX52 265 aa16.53■□□□□ 0.24
SHMT2-210ENST00000553950 RASGRP4Q8TDF6 673 aa16.53■□□□□ 0.24
SHMT2-210ENST00000553950 SCAND2PQ9GZW5 306 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-210ENST00000553950 POLR3EQ9NVU0 708 aa16.53■□□□□ 0.24
SHMT2-210ENST00000553950 ADD3Q9UEY8 706 aaKnown RBP16.53■□□□□ 0.24
SHMT2-210ENST00000553950 YEATS4O95619 227 aa16.52■□□□□ 0.24
SHMT2-210ENST00000553950 TAL1P17542 331 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-210ENST00000553950 NCLP19338 710 aaKnown RBP16.52■□□□□ 0.24
SHMT2-210ENST00000553950 HOXA13P31271 388 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-210ENST00000553950 USP11P51784 963 aa16.52■□□□□ 0.24
SHMT2-210ENST00000553950 TTC38Q5R3I4 469 aa16.52■□□□□ 0.24
SHMT2-210ENST00000553950 POTEEQ6S8J3 1075 aa16.52■□□□□ 0.24
SHMT2-210ENST00000553950 SLC30A10Q6XR72 485 aa16.52■□□□□ 0.24
SHMT2-210ENST00000553950 JMYQ8N9B5 988 aa16.52■□□□□ 0.24
SHMT2-210ENST00000553950 SYTL5Q8TDW5 730 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-210ENST00000553950 TBCKQ8TEA7 893 aa16.52■□□□□ 0.24
SHMT2-210ENST00000553950 SLC5A4Q9NY91 659 aa16.52■□□□□ 0.24
SHMT2-210ENST00000553950 CPA4Q9UI42 421 aa16.52■□□□□ 0.24
SHMT2-210ENST00000553950 MORC2Q9Y6X9 1032 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-210ENST00000553950 RPTORQ8N122 1335 aa16.51■□□□□ 0.23
SHMT2-210ENST00000553950 KIAA1217Q5T5P2 1943 aa16.51■□□□□ 0.23
SHMT2-210ENST00000553950 POTEB2H3BUK9 544 aa16.51■□□□□ 0.23
SHMT2-210ENST00000553950 LAD1O00515 517 aa16.51■□□□□ 0.23
SHMT2-210ENST00000553950 STAM2O75886 525 aa16.51■□□□□ 0.23
SHMT2-210ENST00000553950 PTMSP20962 102 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms