RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 MRS2Q9HD23 443 aa4.45□□□□□ -1.7
SRP54-204ENST00000553923 ZNF451Q9Y4E5 1061 aa4.45□□□□□ -1.7
SRP54-204ENST00000553923 FHOD1Q9Y613 1164 aa4.45□□□□□ -1.7
SRP54-204ENST00000553923 A0A1W2PQJ5 194 aa4.44□□□□□ -1.7
SRP54-204ENST00000553923 TBC1D8O95759 1140 aa4.44□□□□□ -1.7
SRP54-204ENST00000553923 FSHBP01225 129 aa4.44□□□□□ -1.7
SRP54-204ENST00000553923 CD247P20963 164 aa4.44□□□□□ -1.7
SRP54-204ENST00000553923 CACNB2Q08289 660 aaPredicted RBP4.44□□□□□ -1.7
SRP54-204ENST00000553923 TDRD10Q5VZ19 366 aaKnown RBP4.44□□□□□ -1.7
SRP54-204ENST00000553923 FIBCD1Q8N539 461 aa4.44□□□□□ -1.7
SRP54-204ENST00000553923 NKD1Q969G9 470 aa4.44□□□□□ -1.7
SRP54-204ENST00000553923 MTA3Q9BTC8 594 aa4.44□□□□□ -1.7
SRP54-204ENST00000553923 SCAND2PQ9GZW5 306 aaPredicted RBP4.44□□□□□ -1.7
SRP54-204ENST00000553923 NTMQ9P121 344 aa4.44□□□□□ -1.7
SRP54-204ENST00000553923 DBR1Q9UK59 544 aaKnown RBP4.44□□□□□ -1.7
SRP54-204ENST00000553923 ZNRF3Q9ULT6 936 aa4.44□□□□□ -1.7
SRP54-204ENST00000553923 FAM86C2PA6NEL3 165 aa4.43□□□□□ -1.7
SRP54-204ENST00000553923 TRIM26Q12899 539 aaPredicted RBP4.43□□□□□ -1.7
SRP54-204ENST00000553923 CDSNQ15517 529 aa4.43□□□□□ -1.7
SRP54-204ENST00000553923 NOL9Q5SY16 702 aaKnown RBP4.43□□□□□ -1.7
SRP54-204ENST00000553923 RCSD1Q6JBY9 416 aa4.43□□□□□ -1.7
SRP54-204ENST00000553923 NETO2Q8NC67 525 aa4.43□□□□□ -1.7
SRP54-204ENST00000553923 SRRDQ9UH36 339 aa4.43□□□□□ -1.7
SRP54-204ENST00000553923 A0A087WZG4 1122 aa4.42□□□□□ -1.7
SRP54-204ENST00000553923 OVOL3O00110 214 aa4.42□□□□□ -1.7
SRP54-204ENST00000553923 SLC9A5Q14940 896 aa4.42□□□□□ -1.7
SRP54-204ENST00000553923 ZYXQ15942 572 aaKnown RBP4.42□□□□□ -1.7
SRP54-204ENST00000553923 ZBTB8AQ96BR9 441 aa4.42□□□□□ -1.7
SRP54-204ENST00000553923 LOXL4Q96JB6 756 aa4.42□□□□□ -1.7
SRP54-204ENST00000553923 SYT3Q9BQG1 590 aa4.42□□□□□ -1.7
SRP54-204ENST00000553923 GORASP1Q9BQQ3 440 aa4.42□□□□□ -1.7
SRP54-204ENST00000553923 GGT7Q9UJ14 662 aa4.42□□□□□ -1.7
SRP54-204ENST00000553923 SF3B6Q9Y3B4 125 aaKnown RBP4.42□□□□□ -1.7
SRP54-204ENST00000553923 AURKAO14965 403 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 CBFA2T2O43439 604 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 ZBTB7AO95365 584 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 SLPIP03973 132 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 C8BP07358 591 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 CD3EP07766 207 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 RPL13P26373 211 aaKnown RBP4.41□□□□□ -1.7
SRP54-204ENST00000553923 ACVRL1P37023 503 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 POU4F1Q01851 419 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 KRTAP1-1Q07627 177 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 SMAD4Q13485 552 aaKnown RBP4.41□□□□□ -1.7
SRP54-204ENST00000553923 MRPL58Q14197 206 aaKnown RBP4.41□□□□□ -1.7
SRP54-204ENST00000553923 PRR31Q5SQ13 230 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 UNC5AQ6ZN44 842 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 TTLL7Q6ZT98 887 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 RBBP8NLQ8NC74 664 aaPredicted RBP4.41□□□□□ -1.7
SRP54-204ENST00000553923 DDX11Q96FC9 970 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 PEX11GQ96HA9 241 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 TM9SF2Q99805 663 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 NOL6Q9H6R4 1146 aaKnown RBP4.41□□□□□ -1.7
SRP54-204ENST00000553923 INVSQ9Y283 1065 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 DIS3Q9Y2L1 958 aaKnown RBP4.41□□□□□ -1.7
SRP54-204ENST00000553923 RWDD3Q9Y3V2 267 aa4.41□□□□□ -1.7
SRP54-204ENST00000553923 TP53P04637 393 aaPredicted RBP4.4□□□□□ -1.71
SRP54-204ENST00000553923 C6P13671 934 aa4.4□□□□□ -1.71
SRP54-204ENST00000553923 THBS2P35442 1172 aa4.4□□□□□ -1.71
SRP54-204ENST00000553923 RGL3Q3MIN7 710 aa4.4□□□□□ -1.71
SRP54-204ENST00000553923 CRIP3Q6Q6R5 217 aa4.4□□□□□ -1.71
SRP54-204ENST00000553923 HS2ST1Q7LGA3 356 aa4.4□□□□□ -1.71
SRP54-204ENST00000553923 USP48Q86UV5 1035 aa4.4□□□□□ -1.71
SRP54-204ENST00000553923 LZTR1Q8N653 840 aa4.4□□□□□ -1.71
SRP54-204ENST00000553923 DVL3Q92997 716 aaPredicted RBP4.4□□□□□ -1.71
SRP54-204ENST00000553923 C11orf84Q9BUA3 381 aaPredicted RBP4.4□□□□□ -1.71
SRP54-204ENST00000553923 ST6GALNAC2Q9UJ37 374 aa4.4□□□□□ -1.71
SRP54-204ENST00000553923 ZNF214Q9UL59 606 aaPredicted RBP4.4□□□□□ -1.71
SRP54-204ENST00000553923 ITGA4P13612 1032 aa4.39□□□□□ -1.71
SRP54-204ENST00000553923 TACR2P21452 398 aa4.39□□□□□ -1.71
SRP54-204ENST00000553923 KIAA2012Q0VF49 1180 aa4.39□□□□□ -1.71
SRP54-204ENST00000553923 FAM26FQ5R3K3 315 aa4.39□□□□□ -1.71
SRP54-204ENST00000553923 LDLRAD1Q5T700 205 aa4.39□□□□□ -1.71
SRP54-204ENST00000553923 EEF1DP3Q658K8 133 aa4.39□□□□□ -1.71
SRP54-204ENST00000553923 LIMS2Q7Z4I7 341 aa4.39□□□□□ -1.71
SRP54-204ENST00000553923 SPRED1Q7Z699 444 aa4.39□□□□□ -1.71
SRP54-204ENST00000553923 RGS22Q8NE09 1264 aa4.39□□□□□ -1.71
SRP54-204ENST00000553923 ZDHHC15Q96MV8 337 aa4.39□□□□□ -1.71
SRP54-204ENST00000553923 NUDT5Q9UKK9 219 aa4.39□□□□□ -1.71
SRP54-204ENST00000553923 TSC22D4Q9Y3Q8 395 aa4.39□□□□□ -1.71
SRP54-204ENST00000553923 LTBP3Q9NS15 1303 aa4.39□□□□□ -1.71
SRP54-204ENST00000553923 MROH6A6NGR9 719 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 SMARCA5O60264 1052 aaPredicted RBP4.38□□□□□ -1.71
SRP54-204ENST00000553923 IMPDH2P12268 514 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 GUCY2CP25092 1073 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 ITGAEP38570 1179 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 HMGA2P52926 109 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 WWC2Q6AWC2 1192 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 RUFY4Q6ZNE9 571 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 CABP7Q86V35 215 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 MIB1Q86YT6 1006 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 LGI4Q8N135 537 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 KYQ8NBH2 561 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 CD248Q9HCU0 757 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 GULP1Q9UBP9 304 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 SIT1Q9Y3P8 196 aa4.38□□□□□ -1.71
SRP54-204ENST00000553923 CYR61O00622 381 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 VAMP4O75379 141 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 CYP2C8P10632 490 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 PPP2R5DQ14738 602 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms