RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 HOXA13P31271 388 aaPredicted RBP14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 STAT6P42226 847 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 KIF4BQ2VIQ3 1234 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 NBPF12Q5TAG4 269 aaPredicted RBP14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 PPP1R18Q6NYC8 613 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 IQUBQ8NA54 791 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 SPATA20Q8TB22 786 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 KIFC2Q96AC6 838 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 DISC1Q9NRI5 854 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 LTBP3Q9NS15 1303 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 MEIS2O14770 477 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 OPLAHO14841 1288 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 TBC1D12O60347 775 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 ARID5BQ14865 1188 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 DLK2Q6UY11 383 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 FBXO11Q86XK2 927 aa14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 ELOA2Q8IYF1 753 aaPredicted RBP14.42□□□□□ -0.1
VIPAS39-206ENST00000553888 POTEMA6NI47 508 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 UBA7P41226 1012 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 MRPL12P52815 198 aaKnown RBP14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 CALCRLQ16602 461 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 KLHL10Q6JEL2 608 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 KANK3Q6NY19 840 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 SARM1Q6SZW1 724 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 CCDC186Q7Z3E2 898 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 IPO4Q8TEX9 1081 aaKnown RBP14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 TBC1D5Q92609 795 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 ZNF341Q9BYN7 854 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 FHDC1Q9C0D6 1143 aaPredicted RBP14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 DEFB129Q9H1M3 183 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 FANCLQ9NW38 375 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 KCNG1Q9UIX4 513 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 RPS12P25398 132 aaKnown RBP14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 STAT2P52630 851 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 LRMPQ12912 555 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 MTMR9Q96QG7 549 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 MMTAG2Q9BU76 263 aaKnown RBP14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 AMNQ9BXJ7 453 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 IFNKQ9P0W0 207 aa14.41□□□□□ -0.1
VIPAS39-206ENST00000553888 PLCG1P19174 1290 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 INPP5BP32019 993 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 PRPHP41219 470 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 STX17P56962 302 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 ZNF592Q92610 1267 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 DPF2Q92785 391 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 XPO4Q9C0E2 1151 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 GOPCQ9HD26 462 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 DICER1Q9UPY3 1922 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 SMC2O95347 1197 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 TXLNAP40222 546 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 DHX8Q14562 1220 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 ANGEL2Q5VTE6 544 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 RRAGBQ5VZM2 374 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 CABP7Q86V35 215 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 NUDT12Q9BQG2 462 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 ANO3Q9BYT9 981 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 VCPKMTQ9H867 229 aa14.4□□□□□ -0.1
VIPAS39-206ENST00000553888 MYL5Q02045 173 aa14.39□□□□□ -0.11
VIPAS39-206ENST00000553888 BTNL9Q6UXG8 535 aa14.39□□□□□ -0.11
VIPAS39-206ENST00000553888 DDX25Q9UHL0 483 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-206ENST00000553888 LAD1O00515 517 aa14.39□□□□□ -0.11
VIPAS39-206ENST00000553888 CLCN1P35523 988 aa14.39□□□□□ -0.11
VIPAS39-206ENST00000553888 EPS15P42566 896 aa14.39□□□□□ -0.11
VIPAS39-206ENST00000553888 MAP3K10Q02779 954 aa14.39□□□□□ -0.11
VIPAS39-206ENST00000553888 HAS1Q92839 578 aa14.39□□□□□ -0.11
VIPAS39-206ENST00000553888 FEZ1Q99689 392 aa14.39□□□□□ -0.11
VIPAS39-206ENST00000553888 PYCARDQ9ULZ3 195 aa14.39□□□□□ -0.11
VIPAS39-206ENST00000553888 MAPK8IP1Q9UQF2 711 aa14.39□□□□□ -0.11
VIPAS39-206ENST00000553888 IKBKBO14920 756 aa14.38□□□□□ -0.11
VIPAS39-206ENST00000553888 ASNSP08243 561 aa14.38□□□□□ -0.11
VIPAS39-206ENST00000553888 FILIP1Q7Z7B0 1213 aa14.38□□□□□ -0.11
VIPAS39-206ENST00000553888 CCSER1Q9C0I3 900 aa14.38□□□□□ -0.11
VIPAS39-206ENST00000553888 SMTNL1A8MU46 457 aa14.38□□□□□ -0.11
VIPAS39-206ENST00000553888 HIRAP54198 1017 aaPredicted RBP14.38□□□□□ -0.11
VIPAS39-206ENST00000553888 FCHSD1Q86WN1 690 aa14.38□□□□□ -0.11
VIPAS39-206ENST00000553888 IGSF22Q8N9C0 903 aa14.38□□□□□ -0.11
VIPAS39-206ENST00000553888 ZKSCAN4Q969J2 545 aaPredicted RBP14.38□□□□□ -0.11
VIPAS39-206ENST00000553888 SAMSN1Q9NSI8 373 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-206ENST00000553888 GDAQ9Y2T3 454 aa14.38□□□□□ -0.11
VIPAS39-206ENST00000553888 GTPBP6O43824 516 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-206ENST00000553888 FANCCQ00597 558 aa14.37□□□□□ -0.11
VIPAS39-206ENST00000553888 TNFAIP1Q13829 316 aa14.37□□□□□ -0.11
VIPAS39-206ENST00000553888 SLC30A10Q6XR72 485 aa14.37□□□□□ -0.11
VIPAS39-206ENST00000553888 MRFAP1L1Q96HT8 127 aa14.37□□□□□ -0.11
VIPAS39-206ENST00000553888 SPON1Q9HCB6 807 aa14.37□□□□□ -0.11
VIPAS39-206ENST00000553888 NFE2L3Q9Y4A8 694 aa14.37□□□□□ -0.11
VIPAS39-206ENST00000553888 UBXN2AP68543 259 aa14.37□□□□□ -0.11
VIPAS39-206ENST00000553888 PRKG1Q13976 671 aa14.37□□□□□ -0.11
VIPAS39-206ENST00000553888 ECM1Q16610 540 aa14.37□□□□□ -0.11
VIPAS39-206ENST00000553888 MLKLQ8NB16 471 aa14.37□□□□□ -0.11
VIPAS39-206ENST00000553888 LRWD1Q9UFC0 647 aa14.37□□□□□ -0.11
VIPAS39-206ENST00000553888 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-206ENST00000553888 PPP1R3GB7ZBB8 358 aa14.36□□□□□ -0.11
VIPAS39-206ENST00000553888 CFBP00751 764 aa14.36□□□□□ -0.11
VIPAS39-206ENST00000553888 RPN1P04843 607 aaKnown RBP14.36□□□□□ -0.11
VIPAS39-206ENST00000553888 GRB10Q13322 594 aa14.36□□□□□ -0.11
VIPAS39-206ENST00000553888 CYP2W1Q8TAV3 490 aa14.36□□□□□ -0.11
VIPAS39-206ENST00000553888 GGA3Q9NZ52 723 aa14.36□□□□□ -0.11
VIPAS39-206ENST00000553888 H7C1D1 291 aa14.36□□□□□ -0.11
VIPAS39-206ENST00000553888 DDNO94850 711 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms