RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 EPB41L4AQ9HCS5 686 aaPredicted RBP10.87□□□□□ -0.67
PRKCH-208ENST00000553846 VTA1Q9NP79 307 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 RNF146Q9NTX7 359 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 MTMR4Q9NYA4 1195 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 SLC4A4Q9Y6R1 1079 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 ZDBF2Q9HCK1 2354 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 SPTBN4Q9H254 2564 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 COL4A6Q14031 1691 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 RAD21O60216 631 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 ZEB2O60315 1214 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 SUPT20HL2P0C7V6 817 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 FDX1P10109 184 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 IL9P15248 144 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 ATP5JP18859 108 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 ERVK-21P61565 698 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 RBL2Q08999 1139 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 MUM1L1Q5H9M0 696 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 TMCO2Q7Z6W1 182 aaPredicted RBP10.86□□□□□ -0.67
PRKCH-208ENST00000553846 FBXL18Q96ME1 805 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 PURBQ96QR8 312 aaKnown RBP10.86□□□□□ -0.67
PRKCH-208ENST00000553846 STRBPQ96SI9 672 aaKnown RBP10.86□□□□□ -0.67
PRKCH-208ENST00000553846 KCNH6Q9H252 994 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 CLIP2Q9UDT6 1046 aa10.86□□□□□ -0.67
PRKCH-208ENST00000553846 GRXCR2A6NFK2 248 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 PLA2G6O60733 806 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 ACTN1P12814 892 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 SLC4A3P48751 1232 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 DEFB103AP81534 67 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 NBPF20Q3BBV1 942 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 TKFCQ3LXA3 575 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 NFRKBQ6P4R8 1299 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 GIMAP6Q6P9H5 292 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 NOL8Q76FK4 1167 aaKnown RBP10.85□□□□□ -0.67
PRKCH-208ENST00000553846 EEPD1Q7L9B9 569 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 SIRT2Q8IXJ6 389 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 LRRC47Q8N1G4 583 aaKnown RBP10.85□□□□□ -0.67
PRKCH-208ENST00000553846 NEK9Q8TD19 979 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 PPP1R13LQ8WUF5 828 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 DHX38Q92620 1227 aaKnown RBP10.85□□□□□ -0.67
PRKCH-208ENST00000553846 ANKS1AQ92625 1134 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 GMCL1Q96IK5 515 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 POLR3EQ9NVU0 708 aa10.85□□□□□ -0.67
PRKCH-208ENST00000553846 CACNA1AO00555 2505 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 LINC01553A4QN01 128 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 ZNF316A6NFI3 1004 aaPredicted RBP10.84□□□□□ -0.67
PRKCH-208ENST00000553846 C19orf67A6NJJ6 358 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 A6NJR5 290 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 GJB5O95377 273 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 CXCL10P02778 98 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 BMP3P12645 472 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 TRAF7Q6Q0C0 670 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 RASGRP2Q7LDG7 609 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 ITPRIPQ8IWB1 547 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 AMOTL1Q8IY63 956 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 KIF1BPQ96EK5 621 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 TRERF1Q96PN7 1200 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 MTG1Q9BT17 334 aaPredicted RBP10.84□□□□□ -0.67
PRKCH-208ENST00000553846 BOLA2Q9H3K6 86 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 COG6Q9Y2V7 657 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 MYO7AQ13402 2215 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 MICAL3Q7RTP6 2002 aa10.84□□□□□ -0.67
PRKCH-208ENST00000553846 LOC102724159A0A0B4J2E5 919 aa10.83□□□□□ -0.68
PRKCH-208ENST00000553846 TMEM232C9JQI7 657 aa10.83□□□□□ -0.68
PRKCH-208ENST00000553846 TTLL1O95922 423 aa10.83□□□□□ -0.68
PRKCH-208ENST00000553846 KCNA5P22460 613 aa10.83□□□□□ -0.68
PRKCH-208ENST00000553846 EDNRBP24530 442 aa10.83□□□□□ -0.68
PRKCH-208ENST00000553846 STAT2P52630 851 aa10.83□□□□□ -0.68
PRKCH-208ENST00000553846 ZP2Q05996 745 aa10.83□□□□□ -0.68
PRKCH-208ENST00000553846 PTPN11Q06124 597 aaPredicted RBP10.83□□□□□ -0.68
PRKCH-208ENST00000553846 PWP2Q15269 919 aaKnown RBP10.83□□□□□ -0.68
PRKCH-208ENST00000553846 LRRFIP1Q32MZ4 808 aaKnown RBP10.83□□□□□ -0.68
PRKCH-208ENST00000553846 HSP90AB4PQ58FF6 505 aa10.83□□□□□ -0.68
PRKCH-208ENST00000553846 SLFN13Q68D06 897 aa10.83□□□□□ -0.68
PRKCH-208ENST00000553846 CLASRPQ8N2M8 674 aaKnown RBP10.83□□□□□ -0.68
PRKCH-208ENST00000553846 STAG1Q8WVM7 1258 aa10.83□□□□□ -0.68
PRKCH-208ENST00000553846 OSBP2Q969R2 916 aa10.83□□□□□ -0.68
PRKCH-208ENST00000553846 PHOX2BQ99453 314 aa10.83□□□□□ -0.68
PRKCH-208ENST00000553846 WDR11Q9BZH6 1224 aa10.83□□□□□ -0.68
PRKCH-208ENST00000553846 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.83□□□□□ -0.68
PRKCH-208ENST00000553846 KIF28PB7ZC32 967 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 DCXO43602 365 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 NBNO60934 754 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 PRDM1O75626 825 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 ALADP13716 330 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 NOVP48745 357 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 CPT1AP50416 773 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 ALDH5A1P51649 535 aaPredicted RBP10.82□□□□□ -0.68
PRKCH-208ENST00000553846 PTCRAQ6ISU1 281 aaPredicted RBP10.82□□□□□ -0.68
PRKCH-208ENST00000553846 KIAA1211Q6ZU35 1233 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 HFE2Q6ZVN8 426 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 FAM160B2Q86V87 743 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 SESTD1Q86VW0 696 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 NEDD1Q8NHV4 660 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 SP7Q8TDD2 431 aaPredicted RBP10.82□□□□□ -0.68
PRKCH-208ENST00000553846 AFAP1L1Q8TED9 768 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 DDRGK1Q96HY6 314 aa10.82□□□□□ -0.68
PRKCH-208ENST00000553846 TGS1Q96RS0 853 aaKnown RBP10.82□□□□□ -0.68
PRKCH-208ENST00000553846 ALG13Q9NP73 1137 aaKnown RBP10.82□□□□□ -0.68
PRKCH-208ENST00000553846 ZFHX2Q9C0A1 2572 aaPredicted RBP10.82□□□□□ -0.68
PRKCH-208ENST00000553846 KMT2EQ8IZD2 1858 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms