RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 DHX32Q7L7V1 743 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-208ENST00000553753 HOMER1Q86YM7 354 aa11.86□□□□□ -0.51
HNRNPC-208ENST00000553753 C7orf61Q8IZ16 206 aa11.86□□□□□ -0.51
HNRNPC-208ENST00000553753 TBC1D5Q92609 795 aa11.86□□□□□ -0.51
HNRNPC-208ENST00000553753 MPHOSPH6Q99547 160 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-208ENST00000553753 MYL10Q9BUA6 226 aa11.86□□□□□ -0.51
HNRNPC-208ENST00000553753 LRRC2Q9BYS8 371 aa11.86□□□□□ -0.51
HNRNPC-208ENST00000553753 PCDHA1Q9Y5I3 950 aa11.86□□□□□ -0.51
HNRNPC-208ENST00000553753 LCTP09848 1927 aa11.86□□□□□ -0.51
HNRNPC-208ENST00000553753 ALPK3Q96L96 1907 aa11.86□□□□□ -0.51
HNRNPC-208ENST00000553753 SYNRGQ9UMZ2 1314 aa11.85□□□□□ -0.51
HNRNPC-208ENST00000553753 PPP1R11O60927 126 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-208ENST00000553753 CALM1P0DP23 149 aa11.85□□□□□ -0.51
HNRNPC-208ENST00000553753 CALM2P0DP24 149 aa11.85□□□□□ -0.51
HNRNPC-208ENST00000553753 CALM3P0DP25 149 aa11.85□□□□□ -0.51
HNRNPC-208ENST00000553753 TNFAIP2Q03169 654 aa11.85□□□□□ -0.51
HNRNPC-208ENST00000553753 TRAF1Q13077 416 aa11.85□□□□□ -0.51
HNRNPC-208ENST00000553753 FBXO16Q8IX29 292 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-208ENST00000553753 FERMT2Q96AC1 680 aa11.85□□□□□ -0.51
HNRNPC-208ENST00000553753 PIGSQ96S52 555 aa11.85□□□□□ -0.51
HNRNPC-208ENST00000553753 SPC25Q9HBM1 224 aa11.85□□□□□ -0.51
HNRNPC-208ENST00000553753 VTA1Q9NP79 307 aa11.85□□□□□ -0.51
HNRNPC-208ENST00000553753 SLC12A7Q9Y666 1083 aa11.85□□□□□ -0.51
HNRNPC-208ENST00000553753 PNMA6FA0A0J9YX94 578 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 B4DLN1 442 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 HMGB1P09429 215 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 C6orf222P0C671 652 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 SMARCA1P28370 1054 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 HSPA4P34932 840 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 MRPL12P52815 198 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 GJA9P57773 515 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 EXOSC10Q01780 885 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 IQSEC1Q6DN90 963 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 TAPT1Q6NXT6 567 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 SLC39A5Q6ZMH5 540 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 NOL8Q76FK4 1167 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 SGMS1Q86VZ5 419 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 KLHDC9Q8NEP7 349 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 SYTL5Q8TDW5 730 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 KCNB2Q92953 911 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 TSEN34Q9BSV6 310 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 PDGFCQ9NRA1 345 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 PHF24Q9UPV7 400 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 SZT2Q5T011 3432 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 CFBP00751 764 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 RXRAP19793 462 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 EDNRBP24530 442 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 GNAQP50148 359 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 PDE4DQ08499 809 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 KCNA10Q16322 511 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 CCSAPQ6IQ19 270 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 SYNE3Q6ZMZ3 975 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 TCEANC2Q96MN5 208 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 LZTS2Q9BRK4 669 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 SPZ1Q9BXG8 430 aa11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 MAP3K20Q9NYL2 800 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 GNEQ9Y223 722 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-208ENST00000553753 LAMA2P24043 3122 aaKnown RBP11.83□□□□□ -0.51
HNRNPC-208ENST00000553753 MOXD2PA6NHM9 499 aa11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 OPLAHO14841 1288 aa11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 EPB41L2O43491 1005 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 SMPD1P17405 629 aa11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 CST5P28325 142 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 ACLYP53396 1101 aa11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 IRX5P78411 483 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 GNASQ5JWF2 1037 aa11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 C1orf53Q5VUE5 145 aa11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 CHRDL2Q6WN34 429 aa11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 FANCBQ8NB91 859 aa11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 PCSK9Q8NBP7 692 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 NSUN6Q8TEA1 469 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 PIBF1Q8WXW3 757 aa11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 TAAR1Q96RJ0 339 aa11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 RMDN3Q96TC7 470 aa11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 UPF3AQ9H1J1 476 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 COL20A1Q9P218 1284 aa11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 ZMYND8Q9ULU4 1186 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-208ENST00000553753 A0A1W2PQ45 241 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 A0A1W2PQY0 241 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 MYADML2A6NDP7 307 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 SYN1P17600 705 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 HSD17B4P51659 736 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 RTP1P59025 263 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 NKX3-2P78367 333 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 GHRHRQ02643 423 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 SNX17Q15036 470 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 APOA5Q6Q788 366 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 TLK2Q86UE8 772 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 MICU3Q86XE3 530 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 CMTR1Q8N1G2 835 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 SRBD1Q8N5C6 995 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 SAMD3Q8N6K7 520 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 RRP36Q96EU6 259 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 IWS1Q96ST2 819 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 WDR11Q9BZH6 1224 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 Q9Y3F1 56 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 SNX14Q9Y5W7 946 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 RBM47A0AV96 593 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms