RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 NUP88Q99567 741 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-205ENST00000553474 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.48□□□□□ -0.09
SHMT2-205ENST00000553474 GDAQ9Y2T3 454 aa14.48□□□□□ -0.09
SHMT2-205ENST00000553474 V9GYY5 206 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-205ENST00000553474 GOLGA8HP0CJ92 632 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 ZSCAN20P17040 1043 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-205ENST00000553474 FXR1P51114 621 aaKnown RBP eCLIP14.47□□□□□ -0.09
SHMT2-205ENST00000553474 UBXN1Q04323 297 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 TMEM266Q2M3C6 531 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 LETM2Q2VYF4 491 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 CNNM4Q6P4Q7 775 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 RAD9BQ6WBX8 426 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 C7orf43Q8WVR3 580 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 RABGGTAQ92696 567 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 NAP1L4Q99733 375 aaKnown RBP14.47□□□□□ -0.09
SHMT2-205ENST00000553474 CARD6Q9BX69 1037 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 TRIM9Q9C026 710 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 GLT8D2Q9H1C3 349 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 DAGLAQ9Y4D2 1042 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 GREB1LQ9C091 1923 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-205ENST00000553474 IGKV6D-41A0A0C4DH26 115 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 SPDYE4A6NLX3 237 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 TTLL1O95922 423 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 YBX3P16989 372 aaKnown RBP eCLIP14.47□□□□□ -0.097e-8■□□□□ 9
SHMT2-205ENST00000553474 PLCG1P19174 1290 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 CCNE1P24864 410 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 CDC25AP30304 524 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 PPP2R3AQ06190 1150 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 TSR1Q2NL82 804 aaKnown RBP14.47□□□□□ -0.09
SHMT2-205ENST00000553474 GPATCH4Q5T3I0 446 aaKnown RBP14.47□□□□□ -0.09
SHMT2-205ENST00000553474 TTI2Q6NXR4 508 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 USP17L2Q6R6M4 530 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 TMCO3Q6UWJ1 677 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 ZNF662Q6ZS27 426 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 IRF2BP1Q8IU81 584 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 MB21D1Q8N884 522 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 CEP112Q8N8E3 955 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 OR8K1Q8NGG5 319 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 TBCKQ8TEA7 893 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 TRIM47Q96LD4 638 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 DNAJC7Q99615 494 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 VPS16Q9H269 839 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 MRPL44Q9H9J2 332 aaKnown RBP14.47□□□□□ -0.09
SHMT2-205ENST00000553474 EXOC1Q9NV70 894 aa14.47□□□□□ -0.09
SHMT2-205ENST00000553474 ABCB11O95342 1321 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 PVALEFA0A1B0GWK0 134 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 POTEB2H3BUK9 544 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 SLC26A4O43511 780 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 KRT9P35527 623 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 DMTNQ08495 405 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 GPR162Q16538 588 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 FIGNQ5HY92 759 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 RSRC2Q7L4I2 434 aaKnown RBP14.46□□□□□ -0.09
SHMT2-205ENST00000553474 ZNF507Q8TCN5 953 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 CPLX3Q8WVH0 158 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 GOLGA1Q92805 767 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 MTMR9Q96QG7 549 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 PIGSQ96S52 555 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 DESI2Q9BSY9 194 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 TAB2Q9NYJ8 693 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 SERPINB13Q9UIV8 391 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 CAPN11Q9UMQ6 739 aa14.46□□□□□ -0.09
SHMT2-205ENST00000553474 LUC7L2Q9Y383 392 aaKnown RBP14.46□□□□□ -0.09
SHMT2-205ENST00000553474 PNMA6FA0A0J9YX94 578 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 RIMBP2O15034 1052 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 TUBBP07437 444 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 CLCN6P51797 869 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 ADCY7P51828 1080 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 RASSF7Q02833 373 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 MTF1Q14872 753 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 CC2D2BQ6DHV5 1058 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 PPP4R3AQ6IN85 833 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 HHIPL2Q6UWX4 724 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 RTKN2Q8IZC4 609 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 P2RX5Q93086 422 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 EHD4Q9H223 541 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 CDC23Q9UJX2 597 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 CTAGE9A4FU28 777 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 PP2D1A8MPX8 630 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 FGFR1OPO95684 399 aaKnown RBP14.45□□□□□ -0.1
SHMT2-205ENST00000553474 GCFC2P16383 781 aaKnown RBP14.45□□□□□ -0.1
SHMT2-205ENST00000553474 GTF2IP78347 998 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 SV2BQ7L1I2 683 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 CSGALNACT2Q8N6G5 542 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 CCDC17Q96LX7 622 aa14.45□□□□□ -0.1
SHMT2-205ENST00000553474 MYH4Q9Y623 1939 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 SBF1O95248 1867 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 USP17L5A8MUK1 530 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 ZRANB2O95218 330 aaKnown RBP eCLIP14.44□□□□□ -0.11e-7■□□□□ 9.4
SHMT2-205ENST00000553474 PDE4DQ08499 809 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 PSMD2Q13200 908 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 SEPT2Q15019 361 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 CALCRLQ16602 461 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 MCTP2Q6DN12 878 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 ARHGAP27Q6ZUM4 889 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 SRGAP1Q7Z6B7 1085 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 ZSCAN29Q8IWY8 852 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-205ENST00000553474 EHBP1Q8NDI1 1231 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 MRIQ9BWK5 157 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 ZC3H12CQ9C0D7 883 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms