RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 CCDC24Q8N4L8 307 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 LINC00301Q8NCQ3 95 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.62□□□□□ -0.39
SYNE2-208ENST00000553289 FAM114A2Q9NRY5 505 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 LOC102724428A0A0B4J2F2 783 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 ATF2P15336 505 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 SIK1P57059 783 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 TMED8Q6PL24 325 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-208ENST00000553289 ZNF277Q9NRM2 450 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-208ENST00000553289 CD2APQ9Y5K6 639 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 DTNBO60941 627 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 MMP1P03956 469 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 MAN2A1Q16706 1144 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 ABCB5Q2M3G0 1257 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 TRIM50Q86XT4 487 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 PROCA1Q8NCQ7 364 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-208ENST00000553289 NACA2Q9H009 215 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 HESX1Q9UBX0 185 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 CASP14P31944 242 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 NSFP46459 744 aaKnown RBP12.62□□□□□ -0.39
SYNE2-208ENST00000553289 FAM160B1Q5W0V3 765 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 PHLDB3Q6NSJ2 640 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 ANKRD42Q8N9B4 389 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 ENOX1Q8TC92 643 aaKnown RBP12.62□□□□□ -0.39
SYNE2-208ENST00000553289 WDR11Q9BZH6 1224 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 ERVV-1B6SEH8 477 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 IFNB1P01574 187 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 GOLGA8HP0CJ92 632 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 ADORA1P30542 326 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 MYL7Q01449 175 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 PTK2Q05397 1052 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 PTCH1Q13635 1447 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 ANKARQ7Z5J8 1434 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 RILPQ96NA2 401 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 CSRNP1Q96S65 589 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 ST7Q9NRC1 585 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 TTLL1O95922 423 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 SH3BGRP55822 239 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-208ENST00000553289 C10orf76Q5T2E6 689 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 UNC5CLQ8IV45 518 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 NLGN1Q8N2Q7 840 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 PPM1KQ8N3J5 372 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 ARHGAP31Q2M1Z3 1444 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 SH2B2O14492 632 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-208ENST00000553289 RNF8O76064 485 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 PSMC2P35998 433 aaKnown RBP12.61□□□□□ -0.39
SYNE2-208ENST00000553289 LIFRP42702 1097 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 PSMD2Q13200 908 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 JPH2Q9BR39 696 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-208ENST00000553289 SPC25Q9HBM1 224 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 RWDD2AQ9UIY3 292 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 SHROOM2Q13796 1616 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 TMEM232C9JQI7 657 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 M0R2C6 588 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 PRPF3O43395 683 aaKnown RBP12.61□□□□□ -0.39
SYNE2-208ENST00000553289 TMEM191BP0C7N4 346 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 GABPAQ06546 454 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 GPIHBP1Q8IV16 184 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 ATP6V0A1Q93050 837 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 NT5C1BQ96P26 610 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 UIMC1Q96RL1 719 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 PUS3Q9BZE2 481 aaKnown RBP12.61□□□□□ -0.39
SYNE2-208ENST00000553289 IFT122Q9HBG6 1241 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 KIF3CO14782 793 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 HSPA6P17066 643 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 CRKLP46109 303 aaKnown RBP12.61□□□□□ -0.39
SYNE2-208ENST00000553289 POLA2Q14181 598 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 MAP7D3Q8IWC1 876 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 CCDC170Q8IYT3 715 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 EPSTI1Q96J88 318 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 SPZ1Q9BXG8 430 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 TLR7Q9NYK1 1049 aaKnown RBP12.61□□□□□ -0.39
SYNE2-208ENST00000553289 KIAA1024Q9UPX6 916 aa12.61□□□□□ -0.39
SYNE2-208ENST00000553289 FKBP3Q00688 224 aaKnown RBP12.6□□□□□ -0.39
SYNE2-208ENST00000553289 TFDP1Q14186 410 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 PROSER3Q2NL68 480 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 ODR4Q5SWX8 454 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 GAS2L3Q86XJ1 694 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 SMCR8Q8TEV9 937 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-208ENST00000553289 AFPP02771 609 aaKnown RBP12.6□□□□□ -0.39
SYNE2-208ENST00000553289 TMOD1P28289 359 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 EPHB4P54760 987 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 BFSP1Q12934 665 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 PPP2R5DQ14738 602 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 RINT1Q6NUQ1 792 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 ZNF589Q86UQ0 364 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-208ENST00000553289 PPP1R12CQ9BZL4 782 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 THAP9Q9H5L6 903 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 METP08581 1390 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 PRDM15P57071 1507 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-208ENST00000553289 EXOC8Q8IYI6 725 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 GSDMBQ8TAX9 411 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 MIPOL1Q8TD10 442 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 CPSF2Q9P2I0 782 aaKnown RBP12.6□□□□□ -0.39
SYNE2-208ENST00000553289 NR2F2P24468 414 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 POLGP54098 1239 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-208ENST00000553289 LRCH2Q5VUJ6 765 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 FNBP4Q8N3X1 1017 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-208ENST00000553289 GDAP1L1Q96MZ0 367 aa12.6□□□□□ -0.39
SYNE2-208ENST00000553289 RABEP2Q9H5N1 569 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms