RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 CATIPQ7Z7H3 387 aa22.44■■□□□ 1.18
PTCH1-227ENST00000553256 TMTC2Q8N394 836 aa22.44■■□□□ 1.18
PTCH1-227ENST00000553256 PIGSQ96S52 555 aa22.44■■□□□ 1.18
PTCH1-227ENST00000553256 LRRC2Q9BYS8 371 aa22.44■■□□□ 1.18
PTCH1-227ENST00000553256 SENP6Q9GZR1 1112 aaPredicted RBP22.44■■□□□ 1.18
PTCH1-227ENST00000553256 PDGFCQ9NRA1 345 aa22.44■■□□□ 1.18
PTCH1-227ENST00000553256 LAMA3Q16787 3333 aa22.44■■□□□ 1.18
PTCH1-227ENST00000553256 BAZ2BQ9UIF8 2168 aaKnown RBP22.43■■□□□ 1.18
PTCH1-227ENST00000553256 PTPDC1A2A3K4 754 aa22.43■■□□□ 1.18
PTCH1-227ENST00000553256 EVI5O60447 810 aa22.43■■□□□ 1.18
PTCH1-227ENST00000553256 PTGS1P23219 599 aa22.43■■□□□ 1.18
PTCH1-227ENST00000553256 GJA9P57773 515 aa22.43■■□□□ 1.18
PTCH1-227ENST00000553256 C1orf53Q5VUE5 145 aa22.43■■□□□ 1.18
PTCH1-227ENST00000553256 DHX32Q7L7V1 743 aaKnown RBP22.43■■□□□ 1.18
PTCH1-227ENST00000553256 DNERQ8NFT8 737 aa22.43■■□□□ 1.18
PTCH1-227ENST00000553256 SPZ1Q9BXG8 430 aa22.43■■□□□ 1.18
PTCH1-227ENST00000553256 AMNQ9BXJ7 453 aa22.43■■□□□ 1.18
PTCH1-227ENST00000553256 EPB41L2O43491 1005 aaKnown RBP22.42■■□□□ 1.18
PTCH1-227ENST00000553256 CALML3P27482 149 aa22.42■■□□□ 1.18
PTCH1-227ENST00000553256 ADCYAP1R1P41586 468 aa22.42■■□□□ 1.18
PTCH1-227ENST00000553256 HSD17B4P51659 736 aa22.42■■□□□ 1.18
PTCH1-227ENST00000553256 FBXO16Q8IX29 292 aaPredicted RBP22.42■■□□□ 1.18
PTCH1-227ENST00000553256 VTA1Q9NP79 307 aa22.42■■□□□ 1.18
PTCH1-227ENST00000553256 ADD3Q9UEY8 706 aaKnown RBP22.42■■□□□ 1.18
PTCH1-227ENST00000553256 MRPL11Q9Y3B7 192 aaKnown RBP22.42■■□□□ 1.18
PTCH1-227ENST00000553256 SNX14Q9Y5W7 946 aa22.42■■□□□ 1.18
PTCH1-227ENST00000553256 NR2E3Q9Y5X4 410 aa22.42■■□□□ 1.18
PTCH1-227ENST00000553256 SMPD1P17405 629 aa22.41■■□□□ 1.18
PTCH1-227ENST00000553256 SLC39A5Q6ZMH5 540 aa22.41■■□□□ 1.18
PTCH1-227ENST00000553256 SRBD1Q8N5C6 995 aaKnown RBP22.41■■□□□ 1.18
PTCH1-227ENST00000553256 TCEANC2Q96MN5 208 aa22.41■■□□□ 1.18
PTCH1-227ENST00000553256 TSEN34Q9BSV6 310 aaKnown RBP22.41■■□□□ 1.18
PTCH1-227ENST00000553256 PNMA6FA0A0J9YX94 578 aa22.4■■□□□ 1.18
PTCH1-227ENST00000553256 PLEKHA8P1O95397 391 aa22.4■■□□□ 1.18
PTCH1-227ENST00000553256 FUT2Q10981 343 aa22.4■■□□□ 1.18
PTCH1-227ENST00000553256 RNF180Q86T96 592 aa22.4■■□□□ 1.18
PTCH1-227ENST00000553256 FBXL16Q8N461 479 aa22.4■■□□□ 1.18
PTCH1-227ENST00000553256 TAAR1Q96RJ0 339 aa22.4■■□□□ 1.18
PTCH1-227ENST00000553256 BRPF3Q9ULD4 1205 aa22.4■■□□□ 1.18
PTCH1-227ENST00000553256 COLQQ9Y215 455 aaPredicted RBP22.4■■□□□ 1.18
PTCH1-227ENST00000553256 KBTBD13C9JR72 458 aa22.39■■□□□ 1.17
PTCH1-227ENST00000553256 RXRAP19793 462 aa22.39■■□□□ 1.17
PTCH1-227ENST00000553256 TNFAIP2Q03169 654 aa22.39■■□□□ 1.17
PTCH1-227ENST00000553256 KRT32Q14532 448 aa22.39■■□□□ 1.17
PTCH1-227ENST00000553256 IQSEC1Q6DN90 963 aa22.39■■□□□ 1.17
PTCH1-227ENST00000553256 EEPD1Q7L9B9 569 aa22.39■■□□□ 1.17
PTCH1-227ENST00000553256 C7orf61Q8IZ16 206 aa22.39■■□□□ 1.17
PTCH1-227ENST00000553256 NUP133Q8WUM0 1156 aa22.39■■□□□ 1.17
PTCH1-227ENST00000553256 AGXT2Q9BYV1 514 aa22.39■■□□□ 1.17
PTCH1-227ENST00000553256 FAM217BQ9NTX9 383 aaPredicted RBP22.39■■□□□ 1.17
PTCH1-227ENST00000553256 Q9Y3F1 56 aa22.39■■□□□ 1.17
PTCH1-227ENST00000553256 PCDHA1Q9Y5I3 950 aa22.39■■□□□ 1.17
PTCH1-227ENST00000553256 TRIOBPQ9H2D6 2365 aa22.38■■□□□ 1.17
PTCH1-227ENST00000553256 MYH6P13533 1939 aa22.38■■□□□ 1.17
PTCH1-227ENST00000553256 A0A1W2PQ45 241 aaPredicted RBP22.38■■□□□ 1.17
PTCH1-227ENST00000553256 A0A1W2PQY0 241 aa22.38■■□□□ 1.17
PTCH1-227ENST00000553256 DHX16O60231 1041 aaKnown RBP22.38■■□□□ 1.17
PTCH1-227ENST00000553256 ATN1P54259 1190 aaPredicted RBP22.38■■□□□ 1.17
PTCH1-227ENST00000553256 APOA5Q6Q788 366 aa22.38■■□□□ 1.17
PTCH1-227ENST00000553256 MCF2L2Q86YR7 1114 aa22.38■■□□□ 1.17
PTCH1-227ENST00000553256 SAMD3Q8N6K7 520 aa22.38■■□□□ 1.17
PTCH1-227ENST00000553256 GDF15Q99988 308 aa22.38■■□□□ 1.17
PTCH1-227ENST00000553256 USP26Q9BXU7 913 aa22.38■■□□□ 1.17
PTCH1-227ENST00000553256 MAP3K20Q9NYL2 800 aaKnown RBP22.38■■□□□ 1.17
PTCH1-227ENST00000553256 PCDH10Q9P2E7 1040 aa22.38■■□□□ 1.17
PTCH1-227ENST00000553256 CCDC69A6NI79 296 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 REC8O95072 547 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 CPA1P15085 419 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 KIF5BP33176 963 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 ACLYP53396 1101 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 RTP1P59025 263 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 KCNA10Q16322 511 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 DUSP28Q4G0W2 176 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 TMTC3Q6ZXV5 915 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 HOMER1Q86YM7 354 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 FANCBQ8NB91 859 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 CTCFLQ8NI51 663 aaPredicted RBP22.37■■□□□ 1.17
PTCH1-227ENST00000553256 FERMT2Q96AC1 680 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 LZTS2Q9BRK4 669 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 SLC12A7Q9Y666 1083 aa22.37■■□□□ 1.17
PTCH1-227ENST00000553256 MOXD2PA6NHM9 499 aa22.36■■□□□ 1.17
PTCH1-227ENST00000553256 CALM1P0DP23 149 aa22.36■■□□□ 1.17
PTCH1-227ENST00000553256 CALM2P0DP24 149 aa22.36■■□□□ 1.17
PTCH1-227ENST00000553256 CALM3P0DP25 149 aa22.36■■□□□ 1.17
PTCH1-227ENST00000553256 RAB11FIP4Q86YS3 637 aa22.36■■□□□ 1.17
PTCH1-227ENST00000553256 CMTR1Q8N1G2 835 aaKnown RBP22.36■■□□□ 1.17
PTCH1-227ENST00000553256 ZMYND8Q9ULU4 1186 aaPredicted RBP22.36■■□□□ 1.17
PTCH1-227ENST00000553256 SZT2Q5T011 3432 aa22.35■■□□□ 1.17
PTCH1-227ENST00000553256 HMGB1P09429 215 aaKnown RBP22.35■■□□□ 1.17
PTCH1-227ENST00000553256 GNAQP50148 359 aa22.35■■□□□ 1.17
PTCH1-227ENST00000553256 HABP4Q5JVS0 413 aaKnown RBP22.35■■□□□ 1.17
PTCH1-227ENST00000553256 CCDC62Q6P9F0 684 aa22.35■■□□□ 1.17
PTCH1-227ENST00000553256 CHRDL2Q6WN34 429 aa22.35■■□□□ 1.17
PTCH1-227ENST00000553256 NFXL1Q6ZNB6 911 aa22.35■■□□□ 1.17
PTCH1-227ENST00000553256 TLK2Q86UE8 772 aa22.35■■□□□ 1.17
PTCH1-227ENST00000553256 NSUN6Q8TEA1 469 aaKnown RBP22.35■■□□□ 1.17
PTCH1-227ENST00000553256 IWS1Q96ST2 819 aa22.35■■□□□ 1.17
PTCH1-227ENST00000553256 PXMP2Q9NR77 195 aa22.35■■□□□ 1.17
PTCH1-227ENST00000553256 FRMPD4Q14CM0 1322 aa22.34■■□□□ 1.17
PTCH1-227ENST00000553256 ARIH2O95376 493 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms