RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 UBE2OQ9C0C9 1292 aaKnown RBP5.54□□□□□ -1.52
PFDN5-219ENST00000553171 VCX3BQ9H321 246 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 SENP2Q9HC62 589 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 SH3GLB2Q9NR46 395 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 TOMM22Q9NS69 142 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 PDRG1Q9NUG6 133 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 TUBA8Q9NY65 449 aaPredicted RBP5.54□□□□□ -1.52
PFDN5-219ENST00000553171 FAM184BQ9ULE4 1060 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 PTCH2Q9Y6C5 1203 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 ZNF292O60281 2723 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 ZNF831Q5JPB2 1677 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 A0A0B4J203 849 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 H7C1W4 665 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 STXBP3O00186 592 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 SCAMP3O14828 347 aaKnown RBP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 NEMFO60524 1076 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 FGFR1OPO95684 399 aaKnown RBP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 NCAM1P13591 858 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 BTF3P20290 206 aaKnown RBP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 CD9P21926 228 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 ZNF76P36508 570 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 PLA2G4AP47712 749 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 TPD52P55327 224 aaPredicted RBP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 CTAG1AP78358 180 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 GPSM2P81274 684 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 NUCB1Q02818 461 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 LMNB2Q03252 620 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 SREBF2Q12772 1141 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 IKQ13123 557 aaPredicted RBP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 NOLC1Q14978 699 aaKnown RBP eCLIP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 TNIP1Q15025 636 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 TERF2Q15554 542 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 GRAMD1BQ3KR37 738 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 BOLA3Q53S33 107 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 AKNAD1Q5T1N1 836 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 NAIF1Q69YI7 327 aaPredicted RBP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 FIP1L1Q6UN15 594 aaKnown RBP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 KRT26Q7Z3Y9 468 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 FERMT3Q86UX7 667 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 PARP9Q8IXQ6 854 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 TEX11Q8IYF3 940 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 IFNL3Q8IZI9 196 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 DCLK2Q8N568 766 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 GIMAP8Q8ND71 665 aaPredicted RBP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 EXOC6Q8TAG9 804 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 KIAA1524Q8TCG1 905 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 ACMSDQ8TDX5 336 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 IP6K1Q92551 441 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 TSR2Q969E8 191 aaKnown RBP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 CEP95Q96GE4 821 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 MASTLQ96GX5 879 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 FAXDC2Q96IV6 333 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 MOGAT1Q96PD6 335 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 CARD11Q9BXL7 1154 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 ZNF700Q9H0M5 742 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 OSBPL5Q9H0X9 879 aaPredicted RBP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 OSBPL2Q9H1P3 480 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 CHST12Q9NRB3 414 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 DISC1Q9NRI5 854 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 KCTD5Q9NXV2 234 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 IL20Q9NYY1 176 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 UBAP1Q9NZ09 502 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 STIM2Q9P246 746 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 EPS15L1Q9UBC2 864 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 WDR37Q9Y2I8 494 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 R3HCC1Q9Y3T6 440 aaKnown RBP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 SNX5Q9Y5X3 404 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 NPC1L1Q9UHC9 1359 aa5.53□□□□□ -1.52
PFDN5-219ENST00000553171 ZFHX2Q9C0A1 2572 aaPredicted RBP5.53□□□□□ -1.52
PFDN5-219ENST00000553171 KDM3BQ7LBC6 1761 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 M0QX08 132 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 STK25O00506 426 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 MUSKO15146 869 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 SPTLC2O15270 562 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 LILRB3O75022 631 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 SKAP2O75563 359 aaPredicted RBP5.52□□□□□ -1.53
PFDN5-219ENST00000553171 FARP2O94887 1054 aaPredicted RBP5.52□□□□□ -1.53
PFDN5-219ENST00000553171 GJB1P08034 283 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 PECAM1P16284 738 aaPredicted RBP5.52□□□□□ -1.53
PFDN5-219ENST00000553171 S100A5P33763 92 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 CRKLP46109 303 aaKnown RBP5.52□□□□□ -1.53
PFDN5-219ENST00000553171 TNNI2P48788 182 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 PSMD7P51665 324 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 NEK2P51955 445 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 NLRP12P59046 1061 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 BPIFB3P59826 476 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 FKBP1BP68106 108 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 PDE1CQ14123 709 aaPredicted RBP5.52□□□□□ -1.53
PFDN5-219ENST00000553171 PDE3AQ14432 1141 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 IQCB1Q15051 598 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 RCN1Q15293 331 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 SF3B3Q15393 1217 aaKnown RBP5.52□□□□□ -1.53
PFDN5-219ENST00000553171 DOK7Q18PE1 504 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 C10orf76Q5T2E6 689 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 ARMC4Q5T2S8 1044 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 OLFML1Q6UWY5 402 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 UNC5DQ6UXZ4 953 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 RASGRP2Q7LDG7 609 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms