RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 NUP88Q99567 741 aaPredicted RBP8.21□□□□□ -1.1
BEST3-212ENST00000553096 FAM204AQ9H8W3 233 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 RMND1Q9NWS8 449 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 RWDD2AQ9UIY3 292 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 ATF5Q9Y2D1 282 aaPredicted RBP8.21□□□□□ -1.1
BEST3-212ENST00000553096 MYH4Q9Y623 1939 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 POLRMTO00411 1230 aaKnown RBP8.2□□□□□ -1.1
BEST3-212ENST00000553096 N4BP3O15049 544 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 RNF40O75150 1001 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 SERPINB2P05120 415 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 VEGFAP15692 232 aaPredicted RBP8.2□□□□□ -1.1
BEST3-212ENST00000553096 PAX3P23760 479 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 ARHGAP25P42331 645 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 DPYDQ12882 1025 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 TSR1Q2NL82 804 aaKnown RBP8.2□□□□□ -1.1
BEST3-212ENST00000553096 SBK1Q52WX2 424 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 IFIT1BQ5T764 474 aaKnown RBP8.2□□□□□ -1.1
BEST3-212ENST00000553096 KLHL10Q6JEL2 608 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 C15orf52Q6ZUT6 534 aaKnown RBP8.2□□□□□ -1.1
BEST3-212ENST00000553096 GRAMD1CQ8IYS0 662 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 MKL1Q969V6 931 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 PAGE5Q96GU1 130 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 CRNKL1Q9BZJ0 848 aaKnown RBP8.2□□□□□ -1.1
BEST3-212ENST00000553096 LEMD3Q9Y2U8 911 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 PCDHB6Q9Y5E3 794 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 A6NNZ2 444 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 N4BP1O75113 896 aaKnown RBP8.2□□□□□ -1.1
BEST3-212ENST00000553096 FXR1P51114 621 aaKnown RBP eCLIP8.2□□□□□ -1.1
BEST3-212ENST00000553096 KRT83P78385 493 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 AKAP17AQ02040 695 aaKnown RBP8.2□□□□□ -1.1
BEST3-212ENST00000553096 TUBB8Q3ZCM7 444 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 TRAPPC11Q7Z392 1133 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 DYNLL2Q96FJ2 89 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 RTFDC1Q9BY42 306 aaPredicted RBP8.2□□□□□ -1.1
BEST3-212ENST00000553096 RNF26Q9BY78 433 aaPredicted RBP8.2□□□□□ -1.1
BEST3-212ENST00000553096 IL17RBQ9NRM6 502 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 ATP8A2Q9NTI2 1148 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 VPS54Q9P1Q0 977 aa8.2□□□□□ -1.1
BEST3-212ENST00000553096 A0A087WUV0 522 aaPredicted RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 LRRIQ3A6PVS8 624 aaPredicted RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 PPP1R3GB7ZBB8 358 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 TPD52L2O43399 206 aaKnown RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 FAM163BP0C2L3 166 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 COPB1P53618 953 aaKnown RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 ERVK-24P63145 666 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 TMTC3Q6ZXV5 915 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 DZIP1Q86YF9 867 aaKnown RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 SRBD1Q8N5C6 995 aaKnown RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 KCNV2Q8TDN2 545 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 TNFRSF25Q93038 417 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 AKT1S1Q96B36 256 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 CRACR2AQ9BSW2 395 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 PHF20Q9BVI0 1012 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 ARPP21Q9UBL0 812 aaPredicted RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 POLLQ9UGP5 575 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 RGPD3A6NKT7 1758 aaPredicted RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 RGPD4Q7Z3J3 1758 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 KRT2P35908 639 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 STX17P56962 302 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 PAK1Q13153 545 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 STIM1Q13586 685 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 KRT31Q15323 416 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 SLC35G1Q2M3R5 365 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 SWT1Q5T5J6 900 aaKnown RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 C12orf60Q5U649 245 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 ZNF280DQ6N043 979 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 GBP6Q6ZN66 633 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 HPCAL4Q9UM19 191 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 CTNND2Q9UQB3 1225 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 SAR1BQ9Y6B6 198 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 EPN1Q9Y6I3 576 aaPredicted RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 A0A1W2PQC6 194 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 ANO9A1A5B4 782 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 PRPF3O43395 683 aaKnown RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 UFL1O94874 794 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 NDUFA10O95299 355 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 LDHBP07195 334 aaKnown RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 PCP11498 1178 aaKnown RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 IL1R1P14778 569 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 CD44P16070 742 aaKnown RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 KRT9P35527 623 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 AFMP43652 599 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 ZRSR2Q15696 482 aaKnown RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 PAPD7Q5XG87 772 aaKnown RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 SLC44A5Q8NCS7 719 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 OR8K1Q8NGG5 319 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 COG1Q8WTW3 980 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 RPGRQ92834 1020 aaKnown RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 MAF1Q9H063 256 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 NUCKS1Q9H1E3 243 aaKnown RBP8.19□□□□□ -1.1
BEST3-212ENST00000553096 DEF6Q9H4E7 631 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 SUGCTQ9HAC7 445 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 CABP5Q9NP86 173 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 MCM9Q9NXL9 1143 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 JRKLQ9Y4A0 524 aa8.19□□□□□ -1.1
BEST3-212ENST00000553096 SLX4Q8IY92 1834 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 KLRG2A4D1S0 409 aaPredicted RBP8.18□□□□□ -1.1
BEST3-212ENST00000553096 KRT86O43790 486 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 GTPBP6O43824 516 aaPredicted RBP8.18□□□□□ -1.1
BEST3-212ENST00000553096 SHOX2O60902 331 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms