RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SAMD11Q96NU1 681 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 CNTNAP3Q9BZ76 1288 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 WNT8AQ9H1J5 351 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 SERPINB13Q9UIV8 391 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 EPG5Q9HCE0 2579 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 ZNF318Q5VUA4 2279 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 UMODL1Q5DID0 1318 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 MED19A0JLT2 244 aaPredicted RBP6.29□□□□□ -1.4
CKAP4-203ENST00000553039 MYADML2A6NDP7 307 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 SOWAHBA6NEL2 793 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 SMCHD1A6NHR9 2005 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 B4GALT4O60513 344 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 IQCF3P0C7M6 154 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 FDX1P10109 184 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 TIMM10P62072 90 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 TNFAIP2Q03169 654 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 RASGRF1Q13972 1273 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 FSCN1Q16658 493 aaKnown RBP6.29□□□□□ -1.4
CKAP4-203ENST00000553039 LRRFIP1Q32MZ4 808 aaKnown RBP6.29□□□□□ -1.4
CKAP4-203ENST00000553039 NAA16Q6N069 864 aaPredicted RBP6.29□□□□□ -1.4
CKAP4-203ENST00000553039 CERS3Q8IU89 383 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 MAGEB6Q8N7X4 407 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 ANKRD44Q8N8A2 993 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 GDPD5Q8WTR4 605 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 TSR2Q969E8 191 aaKnown RBP6.29□□□□□ -1.4
CKAP4-203ENST00000553039 LENG1Q96BZ8 264 aaPredicted RBP6.29□□□□□ -1.4
CKAP4-203ENST00000553039 ALDH8A1Q9H2A2 487 aaPredicted RBP6.29□□□□□ -1.4
CKAP4-203ENST00000553039 SEMA4AQ9H3S1 761 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 SH2D4AQ9H788 454 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 BRWD1Q9NSI6 2320 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 CLDND1Q9NY35 253 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 AATFQ9NY61 560 aaKnown RBP eCLIP6.29□□□□□ -1.4
CKAP4-203ENST00000553039 MTUS1Q9ULD2 1270 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 Q9Y3F1 56 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 INSL6Q9Y581 213 aa6.29□□□□□ -1.4
CKAP4-203ENST00000553039 LRRC37A2A6NM11 1700 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 ABHD14A-ACY1A0A1B0GW23 586 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 DYNC1LI2O43237 492 aaPredicted RBP6.28□□□□□ -1.4
CKAP4-203ENST00000553039 SDHBP21912 280 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 MCAMP43121 646 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 GCGRP47871 477 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 BEX3Q00994 111 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 TMEM132BQ14DG7 1078 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 BRDTQ58F21 947 aaPredicted RBP6.28□□□□□ -1.4
CKAP4-203ENST00000553039 IQSEC1Q6DN90 963 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 ATG9AQ7Z3C6 839 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 SPATA5Q8NB90 893 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 CCER1Q8TC90 406 aaPredicted RBP6.28□□□□□ -1.4
CKAP4-203ENST00000553039 EHD4Q9H223 541 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 NSUN3Q9H649 340 aaKnown RBP6.28□□□□□ -1.4
CKAP4-203ENST00000553039 DNAJC18Q9H819 358 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.28□□□□□ -1.4
CKAP4-203ENST00000553039 PCDHGC3Q9UN70 934 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 ADAMTS5Q9UNA0 930 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 CTDP1Q9Y5B0 961 aaPredicted RBP6.28□□□□□ -1.4
CKAP4-203ENST00000553039 ATRXP46100 2492 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 PTPRFP10586 1907 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 DOCK1Q14185 1865 aa6.28□□□□□ -1.4
CKAP4-203ENST00000553039 PHIPQ8WWQ0 1821 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 LINC01553A4QN01 128 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 MPHOSPH10O00566 681 aaKnown RBP6.27□□□□□ -1.41
CKAP4-203ENST00000553039 MBTPS2O43462 519 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 ARHGEF15O94989 841 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 GJB5O95377 273 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 CYP2C9P11712 490 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 USP5P45974 858 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 SMAD4Q13485 552 aaKnown RBP6.27□□□□□ -1.41
CKAP4-203ENST00000553039 GPM6BQ13491 265 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 IKBKEQ14164 716 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 ST3GAL2Q16842 350 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 SHROOM1Q2M3G4 852 aaPredicted RBP6.27□□□□□ -1.41
CKAP4-203ENST00000553039 TBC1D9Q6ZT07 1266 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 ANKRD35Q8N283 1001 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 CCDC155Q8N6L0 562 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 KCNG4Q8TDN1 519 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 VWCEQ96DN2 955 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 ATG4CQ96DT6 458 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 XAGE2Q96GT9 111 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 RIPOR3Q96MK2 946 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 NEUROD6Q96NK8 337 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 ARHGEF10LQ9HCE6 1279 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 SAP30BPQ9UHR5 308 aaKnown RBP6.27□□□□□ -1.41
CKAP4-203ENST00000553039 NOD1Q9Y239 953 aa6.27□□□□□ -1.41
CKAP4-203ENST00000553039 GRIN2DO15399 1336 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 FLT1P17948 1338 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 LOC285556D6RIA3 1793 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 CHD9Q3L8U1 2897 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 LCHNA4D1U4 455 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 ASB14A6NK59 587 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 USP17L12C9JPN9 530 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 USP17L21D6R901 530 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 H3BNC9 293 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 VWA5AO00534 786 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 WDR46O15213 610 aaKnown RBP6.26□□□□□ -1.41
CKAP4-203ENST00000553039 CTAGE5O15320 804 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 ATP9BO43861 1147 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 KPNA6O60684 536 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 HMGB1P09429 215 aaKnown RBP6.26□□□□□ -1.41
CKAP4-203ENST00000553039 UQCRFS1P1P0C7P4 283 aa6.26□□□□□ -1.41
CKAP4-203ENST00000553039 RFX5P48382 616 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms