RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 CAPN2P17655 700 aa13.57□□□□□ -0.24
TRAFD1-209ENST00000552896 CYP2C19P33261 490 aa13.57□□□□□ -0.24
TRAFD1-209ENST00000552896 CNTN2Q02246 1040 aa13.57□□□□□ -0.24
TRAFD1-209ENST00000552896 GHRHRQ02643 423 aa13.57□□□□□ -0.24
TRAFD1-209ENST00000552896 PWP2Q15269 919 aaKnown RBP13.57□□□□□ -0.24
TRAFD1-209ENST00000552896 RNF207Q6ZRF8 634 aa13.57□□□□□ -0.24
TRAFD1-209ENST00000552896 MCF2L2Q86YR7 1114 aa13.57□□□□□ -0.24
TRAFD1-209ENST00000552896 PCDHA1Q9Y5I3 950 aa13.57□□□□□ -0.24
TRAFD1-209ENST00000552896 ASTN1O14525 1302 aa13.57□□□□□ -0.24
TRAFD1-209ENST00000552896 PDE4DIPQ5VU43 2346 aa13.56□□□□□ -0.24
TRAFD1-209ENST00000552896 CCDC196A0A1B0GTZ2 297 aa13.56□□□□□ -0.24
TRAFD1-209ENST00000552896 GJA8P48165 433 aa13.56□□□□□ -0.24
TRAFD1-209ENST00000552896 RPS6P62753 249 aaKnown RBP13.56□□□□□ -0.24
TRAFD1-209ENST00000552896 BAATQ14032 418 aaPredicted RBP13.56□□□□□ -0.24
TRAFD1-209ENST00000552896 SHISA4Q96DD7 197 aa13.56□□□□□ -0.24
TRAFD1-209ENST00000552896 PDRG1Q9NUG6 133 aa13.56□□□□□ -0.24
TRAFD1-209ENST00000552896 NAP1L2Q9ULW6 460 aaPredicted RBP13.56□□□□□ -0.24
TRAFD1-209ENST00000552896 ASB14A6NK59 587 aa13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 OPLAHO14841 1288 aa13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 MSCO60682 206 aa13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 CCND3P30281 292 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 HSD17B4P51659 736 aa13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 FUT2Q10981 343 aa13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 ARMCX2Q7L311 632 aa13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 CMTR1Q8N1G2 835 aaKnown RBP13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 SAMD3Q8N6K7 520 aa13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 TRPV1Q8NER1 839 aa13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 U2AF1L4Q8WU68 220 aaKnown RBP13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 DEFB118Q96PH6 123 aa13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 CRISPLD2Q9H0B8 497 aa13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 ALDH8A1Q9H2A2 487 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 FAM217BQ9NTX9 383 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 MAP3K20Q9NYL2 800 aaKnown RBP13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 ADD3Q9UEY8 706 aaKnown RBP13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 CNPY2Q9Y2B0 182 aa13.55□□□□□ -0.24
TRAFD1-209ENST00000552896 SOWAHBA6NEL2 793 aa13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 hCG_1984214I3L0E3 225 aa13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 SEPT4O43236 478 aa13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 CALML3P27482 149 aa13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 PDIA3P30101 505 aaKnown RBP13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 CDC27P30260 824 aa13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 RBM25P49756 843 aaKnown RBP13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 ALDH5A1P51649 535 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 ANKRD1Q15327 319 aa13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 ZNF713Q8N859 430 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 DNERQ8NFT8 737 aa13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 MORC4Q8TE76 937 aa13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 ZNF274Q96GC6 653 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 UPF2Q9HAU5 1272 aaKnown RBP13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 MYH7BA7E2Y1 1941 aa13.54□□□□□ -0.24
TRAFD1-209ENST00000552896 SGPL1O95470 568 aa13.53□□□□□ -0.24
TRAFD1-209ENST00000552896 SNAI1O95863 264 aaPredicted RBP13.53□□□□□ -0.24
TRAFD1-209ENST00000552896 RGS19P49795 217 aa13.53□□□□□ -0.24
TRAFD1-209ENST00000552896 PIBF1Q8WXW3 757 aa13.53□□□□□ -0.24
TRAFD1-209ENST00000552896 MPHOSPH6Q99547 160 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-209ENST00000552896 C22orf23Q9BZE7 217 aa13.53□□□□□ -0.24
TRAFD1-209ENST00000552896 ABHD16BQ9H3Z7 469 aa13.53□□□□□ -0.24
TRAFD1-209ENST00000552896 RBM27Q9P2N5 1060 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-209ENST00000552896 DDX20Q9UHI6 824 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-209ENST00000552896 DNAH12Q6ZR08 3092 aa13.53□□□□□ -0.24
TRAFD1-209ENST00000552896 DOCK5Q9H7D0 1870 aa13.53□□□□□ -0.24
TRAFD1-209ENST00000552896 CFBP00751 764 aa13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 ZNF865P0CJ78 1059 aaPredicted RBP13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 AKR1A1P14550 325 aa13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 EN2P19622 333 aaPredicted RBP13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 EDNRBP24530 442 aa13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 CNGA1P29973 690 aa13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 ADD1P35611 737 aaKnown RBP13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 LHX8Q68G74 356 aa13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 PPP1R18Q6NYC8 613 aa13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 TEX2Q8IWB9 1127 aa13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 CCDC82Q8N4S0 544 aa13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 ANKLE1Q8NAG6 615 aa13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 SYTL5Q8TDW5 730 aaPredicted RBP13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 PURBQ96QR8 312 aaKnown RBP13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 KATNBL1Q9H079 304 aa13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 VTA1Q9NP79 307 aa13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 OGDHLQ9ULD0 1010 aa13.52□□□□□ -0.25
TRAFD1-209ENST00000552896 FRMPD4Q14CM0 1322 aa13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 B4DLN1 442 aa13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 GCOM1H8Y6P7 765 aaPredicted RBP13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 POLR2MP0CAP2 368 aa13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 IFNAR1P17181 557 aa13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 MRPL12P52815 198 aaKnown RBP13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 AK2P54819 239 aa13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 ACVR2BQ13705 512 aa13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 WWC2Q6AWC2 1192 aa13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 HEATR3Q7Z4Q2 680 aa13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 TBC1D5Q92609 795 aa13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 GPKOWQ92917 476 aaPredicted RBP eCLIP13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 RNF26Q9BY78 433 aaPredicted RBP13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 NCOA5Q9HCD5 579 aaKnown RBP13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 COL20A1Q9P218 1284 aa13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 ZHX1Q9UKY1 873 aaPredicted RBP13.51□□□□□ -0.25
TRAFD1-209ENST00000552896 hCG_1642624A0A1W2PR95 340 aa13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 PIK3CDO00329 1044 aa13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 FARP2O94887 1054 aaPredicted RBP13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 SCG2P13521 617 aa13.5□□□□□ -0.25
TRAFD1-209ENST00000552896 NEK4P51957 841 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms