RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 ADD3Q9UEY8 706 aaKnown RBP10.26□□□□□ -0.77
TMEM116-217ENST00000552801 LAMA3Q16787 3333 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 PLIN4Q96Q06 1357 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 MYADML2A6NDP7 307 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 B4DLN1 442 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 ITGB8P26012 769 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 MRPL12P52815 198 aaKnown RBP10.26□□□□□ -0.77
TMEM116-217ENST00000552801 CNTN2Q02246 1040 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 FSCN1Q16658 493 aaKnown RBP10.26□□□□□ -0.77
TMEM116-217ENST00000552801 ZMYM1Q5SVZ6 1142 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 RCSD1Q6JBY9 416 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 AGBL1Q96MI9 1066 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 SEC62Q99442 399 aaKnown RBP10.26□□□□□ -0.77
TMEM116-217ENST00000552801 SEZ6LQ9BYH1 1024 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 UPF3AQ9H1J1 476 aaKnown RBP10.26□□□□□ -0.77
TMEM116-217ENST00000552801 ZNF576Q9H609 170 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 PNMA2Q9UL42 364 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 RAD50Q92878 1312 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 COL6A3P12111 3177 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 PTPDC1A2A3K4 754 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 FAM205CA6NFA0 338 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 DYNC1LI2O43237 492 aaPredicted RBP10.25□□□□□ -0.77
TMEM116-217ENST00000552801 CSF2RAP15509 400 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 EPHB4P54760 987 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 BEX3Q00994 111 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 CTDSPL2Q05D32 466 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 RAB30Q15771 203 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 ANKRD45Q5TZF3 282 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 IQSEC1Q6DN90 963 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 CXCL17Q6UXB2 119 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 KIAA1211Q6ZU35 1233 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.25□□□□□ -0.77
TMEM116-217ENST00000552801 EEPD1Q7L9B9 569 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 RPUSD2Q8IZ73 545 aaKnown RBP10.25□□□□□ -0.77
TMEM116-217ENST00000552801 DCAF4Q8WV16 495 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 PPM1EQ8WY54 764 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 EVI5LQ96CN4 794 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.25□□□□□ -0.77
TMEM116-217ENST00000552801 TTYH1Q9H313 450 aaPredicted RBP10.25□□□□□ -0.77
TMEM116-217ENST00000552801 HIPK3Q9H422 1215 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 A1CFQ9NQ94 594 aaKnown RBP10.25□□□□□ -0.77
TMEM116-217ENST00000552801 TBX21Q9UL17 535 aa10.25□□□□□ -0.77
TMEM116-217ENST00000552801 ZBBXA8MT70 800 aa10.24□□□□□ -0.77
TMEM116-217ENST00000552801 TRIM6-TRIM34B2RNG4 842 aa10.24□□□□□ -0.77
TMEM116-217ENST00000552801 PLA2G6O60733 806 aa10.24□□□□□ -0.77
TMEM116-217ENST00000552801 FGBP02675 491 aa10.24□□□□□ -0.77
TMEM116-217ENST00000552801 ACRP10323 421 aa10.24□□□□□ -0.77
TMEM116-217ENST00000552801 IGFBP4P22692 258 aa10.24□□□□□ -0.77
TMEM116-217ENST00000552801 SNAP25P60880 206 aa10.24□□□□□ -0.77
TMEM116-217ENST00000552801 ITGA7Q13683 1181 aa10.24□□□□□ -0.77
TMEM116-217ENST00000552801 FBXO16Q8IX29 292 aaPredicted RBP10.24□□□□□ -0.77
TMEM116-217ENST00000552801 FAM133AQ8N9E0 248 aa10.24□□□□□ -0.77
TMEM116-217ENST00000552801 VTA1Q9NP79 307 aa10.24□□□□□ -0.77
TMEM116-217ENST00000552801 IL23AQ9NPF7 189 aa10.24□□□□□ -0.77
TMEM116-217ENST00000552801 PRR12Q9ULL5 1215 aa10.24□□□□□ -0.77
TMEM116-217ENST00000552801 ICAM1P05362 532 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 SUPT20HL2P0C7V6 817 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 TOP1P11387 765 aaKnown RBP10.23□□□□□ -0.77
TMEM116-217ENST00000552801 CYP2C18P33260 490 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 CPT1AP50416 773 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 CDK7P50613 346 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 MFAP1P55081 439 aaKnown RBP10.23□□□□□ -0.77
TMEM116-217ENST00000552801 PDE4DQ08499 809 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 GRIN2CQ14957 1233 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 FAM47CQ5HY64 1035 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 TMEM240Q5SV17 173 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 CCSAPQ6IQ19 270 aaPredicted RBP10.23□□□□□ -0.77
TMEM116-217ENST00000552801 ZNF365Q70YC5 407 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 FAM126BQ8IXS8 530 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 PI4K2BQ8TCG2 481 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 SLC28A3Q9HAS3 691 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 GPCPD1Q9NPB8 672 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 HELLSQ9NRZ9 838 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 POLR3EQ9NVU0 708 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 CYP39A1Q9NYL5 469 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 NOD1Q9Y239 953 aa10.23□□□□□ -0.77
TMEM116-217ENST00000552801 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.22□□□□□ -0.77
TMEM116-217ENST00000552801 SOWAHBA6NEL2 793 aa10.22□□□□□ -0.77
TMEM116-217ENST00000552801 NMT2O60551 498 aa10.22□□□□□ -0.77
TMEM116-217ENST00000552801 MYL3P08590 195 aa10.22□□□□□ -0.77
TMEM116-217ENST00000552801 ACTN1P12814 892 aa10.22□□□□□ -0.77
TMEM116-217ENST00000552801 SMPD1P17405 629 aa10.22□□□□□ -0.77
TMEM116-217ENST00000552801 CALML3P27482 149 aa10.22□□□□□ -0.77
TMEM116-217ENST00000552801 MCMDC2Q4G0Z9 681 aa10.22□□□□□ -0.77
TMEM116-217ENST00000552801 SYDE2Q5VT97 1194 aa10.22□□□□□ -0.77
TMEM116-217ENST00000552801 OR6J1Q8NGC5 347 aa10.22□□□□□ -0.77
TMEM116-217ENST00000552801 RNF41Q9H4P4 317 aaPredicted RBP10.22□□□□□ -0.77
TMEM116-217ENST00000552801 Q9Y3F1 56 aa10.22□□□□□ -0.77
TMEM116-217ENST00000552801 SLC4A7Q9Y6M7 1214 aa10.22□□□□□ -0.77
TMEM116-217ENST00000552801 FRMPD2Q68DX3 1309 aaPredicted RBP10.22□□□□□ -0.77
TMEM116-217ENST00000552801 ADCY6O43306 1168 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 SLC16A2P36021 539 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 CCL23P55773 120 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 CHMP4BP1P59074 171 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 BAATQ14032 418 aaPredicted RBP10.21□□□□□ -0.78
TMEM116-217ENST00000552801 PPP2R5BQ15173 497 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 MUM1L1Q5H9M0 696 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 TJAP1Q5JTD0 557 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 RNF207Q6ZRF8 634 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 MFSD6Q6ZSS7 791 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms