RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, human

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP44-208	ENST00000552440	TCEAL8	Q8IYN2	117 aa		5.18	□□□□□ -1.58
USP44-208	ENST00000552440	MFSD4A	Q8N468	514 aa		5.18	□□□□□ -1.58
USP44-208	ENST00000552440	EHMT1	Q9H9B1	1298 aa		5.18	□□□□□ -1.58
USP44-208	ENST00000552440	GOLGA6A	Q9NYA3	693 aa		5.18	□□□□□ -1.58
USP44-208	ENST00000552440	DAAM1	Q9Y4D1	1078 aa		5.18	□□□□□ -1.58
USP44-208	ENST00000552440	CSAD	Q9Y600	493 aa		5.18	□□□□□ -1.58
USP44-208	ENST00000552440		A0A087X0B3	334 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440	DYTN	A2CJ06	578 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440	KATNA1	O75449	491 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440	GJB6	O95452	261 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440	SRGN	P10124	158 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440	NTF4	P34130	210 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440	PURA	Q00577	322 aa	Known RBP	5.17	□□□□□ -1.58
USP44-208	ENST00000552440	PIN1	Q13526	163 aa	Predicted RBP	5.17	□□□□□ -1.58
USP44-208	ENST00000552440	MLC1	Q15049	377 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440	LARP1B	Q659C4	914 aa	Known RBP	5.17	□□□□□ -1.58
USP44-208	ENST00000552440	HID1	Q8IV36	788 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440	CPXCR1	Q8N123	301 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440	NGDN	Q8NEJ9	315 aa	Known RBP	5.17	□□□□□ -1.58
USP44-208	ENST00000552440	NINJ1	Q92982	152 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440	GAL3ST3	Q96A11	431 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440	WNT10A	Q9GZT5	417 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440	LUZP4	Q9P127	313 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440		U3KQE9	123 aa		5.17	□□□□□ -1.58
USP44-208	ENST00000552440	KDM2B	Q8NHM5	1336 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	GFOD2	Q3B7J2	385 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	FAM102B	Q5T8I3	360 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	WWC2	Q6AWC2	1192 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	RNF180	Q86T96	592 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	GRIN3A	Q8TCU5	1115 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	IFT122	Q9HBG6	1241 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	NGRN	Q9NPE2	291 aa	Known RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	NOL7	Q9UMY1	257 aa	Known RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	GTF2A1L	Q9UNN4	478 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	PCDHB14	Q9Y5E9	798 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	E2F8	A0AVK6	867 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	ZNF503-AS2	A6NEH8	195 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	NFIB	O00712	420 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	IRS4	O14654	1257 aa	Predicted RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	DIAPH1	O60610	1272 aa	Known RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	PDE8A	O60658	829 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	ATE1	O95260	518 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	RAPGEF3	O95398	923 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	HTR3A	P46098	478 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	PTPN11	Q06124	597 aa	Predicted RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	ANO1	Q5XXA6	986 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	CC2D1A	Q6P1N0	951 aa	Predicted RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	RUFY4	Q6ZNE9	571 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	TMPRSS7	Q7RTY8	843 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	UBR7	Q8N806	425 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	ENAH	Q8N8S7	591 aa	Predicted RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	ANKRD42	Q8N9B4	389 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	C19orf47	Q8N9M1	422 aa	Known RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	FBXO15	Q8NCQ5	510 aa	Predicted RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	ATL2	Q8NHH9	583 aa		5.16	□□□□□ -1.58
USP44-208	ENST00000552440	PIWIL2	Q8TC59	973 aa	Known RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	RTFDC1	Q9BY42	306 aa	Predicted RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	CARS2	Q9HA77	564 aa	Known RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	NOB1	Q9ULX3	412 aa	Known RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	CTDP1	Q9Y5B0	961 aa	Predicted RBP	5.16	□□□□□ -1.58
USP44-208	ENST00000552440	PRRT4	C9JH25	899 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440	TRIM27	P14373	513 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440	PPM1F	P49593	454 aa	Predicted RBP	5.15	□□□□□ -1.59
USP44-208	ENST00000552440	GEMIN4	P57678	1058 aa	Known RBP	5.15	□□□□□ -1.59
USP44-208	ENST00000552440	ETF1	P62495	437 aa	Known RBP	5.15	□□□□□ -1.59
USP44-208	ENST00000552440	RPL6	Q02878	288 aa	Known RBP	5.15	□□□□□ -1.59
USP44-208	ENST00000552440	PPP2R5E	Q16537	467 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440	SLC4A8	Q2Y0W8	1093 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440	CCDC93	Q567U6	631 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440	IL31	Q6EBC2	164 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440	SPOCD1	Q6ZMY3	1216 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440	SPATC1	Q76KD6	591 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440	AFAP1L2	Q8N4X5	818 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440	MAGEB6	Q8N7X4	407 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440	HSPA12B	Q96MM6	686 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440	POLG2	Q9UHN1	485 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440	USP25	Q9UHP3	1055 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440	ASAP1	Q9ULH1	1129 aa		5.15	□□□□□ -1.59
USP44-208	ENST00000552440		A0A1W2PQH9	124 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440		B2RBV5	119 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	PRPF3	O43395	683 aa	Known RBP	5.14	□□□□□ -1.59
USP44-208	ENST00000552440	HIP1R	O75146	1068 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.14	□□□□□ -1.59
USP44-208	ENST00000552440	ETV3	P41162	512 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	NEK3	P51956	506 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	TERF1	P54274	439 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	FAM193A	P78312	1265 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	PICALM	Q13492	652 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	MORC1	Q86VD1	984 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	TTC30B	Q8N4P2	665 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	SNRNP27	Q8WVK2	155 aa	Known RBP	5.14	□□□□□ -1.59
USP44-208	ENST00000552440	ERP27	Q96DN0	273 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	CAMKK2	Q96RR4	588 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	SMAD5	Q99717	465 aa	Known RBP	5.14	□□□□□ -1.59
USP44-208	ENST00000552440	PRDM7	Q9NQW5	492 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	SEMA3G	Q9NS98	782 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	PFDN2	Q9UHV9	154 aa		5.14	□□□□□ -1.59
USP44-208	ENST00000552440	BICDL2	A1A5D9	508 aa		5.13	□□□□□ -1.59
USP44-208	ENST00000552440	PRAMEF27	A3QJZ7	478 aa		5.13	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms