RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ADGRA1Q86SQ6 560 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 ALYREFQ86V81 257 aaKnown RBP6.57□□□□□ -1.36
HOXB3-213ENST00000552000 NCAPG2Q86XI2 1143 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 MEIOBQ8N635 442 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 GPR161Q8N6U8 529 aaKnown RBP6.57□□□□□ -1.36
HOXB3-213ENST00000552000 TOX2Q96NM4 488 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 STARD7Q9NQZ5 370 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 TBX21Q9UL17 535 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 COL11A1P12107 1806 aaPredicted RBP6.57□□□□□ -1.36
HOXB3-213ENST00000552000 EP300Q09472 2414 aaPredicted RBP6.57□□□□□ -1.36
HOXB3-213ENST00000552000 EPG5Q9HCE0 2579 aa6.57□□□□□ -1.36
HOXB3-213ENST00000552000 GVINP1Q7Z2Y8 2422 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 FAM86C2PA6NEL3 165 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 CSF2RAP15509 400 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 GUCY1A2P33402 732 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 COG2Q14746 738 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 RAB30Q15771 203 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 ABCB5Q2M3G0 1257 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 CERKLQ49MI3 558 aaPredicted RBP6.56□□□□□ -1.36
HOXB3-213ENST00000552000 ZNF385CQ66K41 422 aaPredicted RBP6.56□□□□□ -1.36
HOXB3-213ENST00000552000 DESI1Q6ICB0 168 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 ANKRD33Q7Z3H0 272 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 SHCBP1Q8NEM2 672 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 SCARF2Q96GP6 870 aaPredicted RBP6.56□□□□□ -1.36
HOXB3-213ENST00000552000 PPP1R12CQ9BZL4 782 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 TANGO6Q9C0B7 1094 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 SLC28A3Q9HAS3 691 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 MRS2Q9HD23 443 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 CABP5Q9NP86 173 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 HOXC10Q9NYD6 342 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 YBX2Q9Y2T7 364 aaKnown RBP6.56□□□□□ -1.36
HOXB3-213ENST00000552000 MYH8P13535 1937 aa6.56□□□□□ -1.36
HOXB3-213ENST00000552000 SRGAP3O43295 1099 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 ADAMTS4O75173 837 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 PGK2P07205 417 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 NR3C2P08235 984 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 UQCRFS1P1P0C7P4 283 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 ZNF865P0CJ78 1059 aaPredicted RBP6.55□□□□□ -1.36
HOXB3-213ENST00000552000 FCER1AP12319 257 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 AKR1A1P14550 325 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 SHMT1P34896 483 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 ACLYP53396 1101 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 SEPT2Q15019 361 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 AAK1Q2M2I8 961 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 TATDN1Q6P1N9 297 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 PSRC1Q6PGN9 363 aaPredicted RBP6.55□□□□□ -1.36
HOXB3-213ENST00000552000 ABRAQ8N0Z2 381 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 TMEM199Q8N511 208 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 NUP133Q8WUM0 1156 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 FOXJ1Q92949 421 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 VTI1AQ96AJ9 217 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 ATG4CQ96DT6 458 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 MEIS3Q99687 375 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 TINF2Q9BSI4 451 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 TSEN34Q9BSV6 310 aaKnown RBP6.55□□□□□ -1.36
HOXB3-213ENST00000552000 MROH8Q9H579 483 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 NRBP1Q9UHY1 535 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 SERPINB13Q9UIV8 391 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 A0A0G2JMZ2 1700 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 PARP14Q460N5 1801 aa6.55□□□□□ -1.36
HOXB3-213ENST00000552000 LRRC37A2A6NM11 1700 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 A0A1W2PRG0 241 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 MYADML2A6NDP7 307 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 TTLL8A6PVC2 850 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 MPHOSPH10O00566 681 aaKnown RBP6.54□□□□□ -1.36
HOXB3-213ENST00000552000 ERC2O15083 957 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 FLOT1O75955 427 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 MYOGP15173 224 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 CYP7A1P22680 504 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 CYP2C18P33260 490 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 USP5P45974 858 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 RABGGTBP53611 331 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 PTSQ03393 145 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 KCNA10Q16322 511 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 KIAA1755Q5JYT7 1200 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 TTC39AQ5SRH9 613 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 PPP2R2DQ66LE6 453 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 MB21D1Q8N884 522 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 MIGA1Q8NAN2 632 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 KLHDC9Q8NEP7 349 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 HERVK_113Q902F9 699 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 MMP19Q99542 508 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 EHD4Q9H223 541 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 IL23AQ9NPF7 189 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 C11orf16Q9NQ32 467 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 PIH1D3Q9NQM4 214 aaKnown RBP6.54□□□□□ -1.36
HOXB3-213ENST00000552000 SMC4Q9NTJ3 1288 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 HDAC5Q9UQL6 1122 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 CNPY2Q9Y2B0 182 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 TRIP12Q14669 1992 aaPredicted RBP6.54□□□□□ -1.36
HOXB3-213ENST00000552000 C5orf42Q9H799 3197 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 ROBO3Q96MS0 1386 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 TECTAO75443 2155 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 SCN5AQ14524 2016 aa6.54□□□□□ -1.36
HOXB3-213ENST00000552000 MROH7Q68CQ1 1323 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 ZNF521Q96K83 1311 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 SYNRGQ9UMZ2 1314 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 A0A0U1RQG5 324 aaPredicted RBP6.53□□□□□ -1.36
HOXB3-213ENST00000552000 MOXD2PA6NHM9 499 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 ARVCFO00192 962 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms