RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 CYP8B1Q9UNU6 501 aa3.65□□□□□ -1.83
PTCH1-223ENST00000551623 SNCAIPQ9Y6H5 919 aa3.65□□□□□ -1.83
PTCH1-223ENST00000551623 RGPD3A6NKT7 1758 aaPredicted RBP3.65□□□□□ -1.83
PTCH1-223ENST00000551623 RGPD4Q7Z3J3 1758 aa3.65□□□□□ -1.83
PTCH1-223ENST00000551623 CASZ1Q86V15 1759 aa3.65□□□□□ -1.83
PTCH1-223ENST00000551623 PLCH1Q4KWH8 1693 aa3.65□□□□□ -1.83
PTCH1-223ENST00000551623 LRPPRCP42704 1394 aaKnown RBP3.64□□□□□ -1.83
PTCH1-223ENST00000551623 ROBO2Q9HCK4 1378 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 CCDC144AA2RUR9 1427 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 TECPR2O15040 1411 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 DAPK1P53355 1430 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 NRDCO43847 1150 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 SDHBP21912 280 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 EZH2Q15910 746 aaKnown RBP3.64□□□□□ -1.83
PTCH1-223ENST00000551623 CPZQ66K79 652 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.64□□□□□ -1.83
PTCH1-223ENST00000551623 GLYCTKQ8IVS8 523 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 TJP2Q9UDY2 1190 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 ZNF281Q9Y2X9 895 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 PCDHA5Q9Y5H7 936 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 MYO5BQ9ULV0 1848 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 DLC1Q96QB1 1528 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 ABCA3Q99758 1704 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 SHANK3Q9BYB0 1731 aa3.64□□□□□ -1.83
PTCH1-223ENST00000551623 ANKRD30AQ9BXX3 1397 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 NRKQ7Z2Y5 1582 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 TNS3Q68CZ2 1445 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 H3BRB1 525 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 CYR61O00622 381 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 BUB1BO60566 1050 aaPredicted RBP3.63□□□□□ -1.83
PTCH1-223ENST00000551623 FBXO24O75426 580 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 USP2O75604 605 aaPredicted RBP3.63□□□□□ -1.83
PTCH1-223ENST00000551623 CDK8P49336 464 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 ERVFRD-1P60508 538 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 NT5DC1Q5TFE4 455 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 PCNX4Q63HM2 1172 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 MRPL41Q8IXM3 137 aaKnown RBP3.63□□□□□ -1.83
PTCH1-223ENST00000551623 GAL3ST3Q96A11 431 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 C1QTNF3Q9BXJ4 246 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 TUT1Q9H6E5 874 aaKnown RBP3.63□□□□□ -1.83
PTCH1-223ENST00000551623 CEP131Q9UPN4 1083 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 GTF3C3Q9Y5Q9 886 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 SPATA31A5Q5VU36 1347 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 SPATA31A7Q8IWB4 1347 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 UTRNP46939 3433 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 SBNO1A3KN83 1393 aa3.63□□□□□ -1.83
PTCH1-223ENST00000551623 MYOM1P52179 1685 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 KIF1AQ12756 1690 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 CFAP65Q6ZU64 1925 aaKnown RBP3.62□□□□□ -1.83
PTCH1-223ENST00000551623 ITGB3P05106 788 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 PNLIPP16233 465 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 HSPA6P17066 643 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 TACR2P21452 398 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 GSTT1P30711 240 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 KIR2DL1P43626 348 aaPredicted RBP3.62□□□□□ -1.83
PTCH1-223ENST00000551623 KIR2DL2P43627 348 aaPredicted RBP3.62□□□□□ -1.83
PTCH1-223ENST00000551623 SLC14A2Q15849 920 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 NBPF8Q3BBV2 869 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 SLC6A19Q695T7 634 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 FAM196AQ6ZSG2 479 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 TMC6Q7Z403 805 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 ZFPM1Q8IX07 1006 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 NLGN1Q8N2Q7 840 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 TMC1Q8TDI8 760 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 ALKBH8Q96BT7 664 aaKnown RBP3.62□□□□□ -1.83
PTCH1-223ENST00000551623 TMEM87BQ96K49 555 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 SYT17Q9BSW7 474 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 KLHL14Q9P2G3 628 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 PPP1R1BQ9UD71 204 aaPredicted RBP3.62□□□□□ -1.83
PTCH1-223ENST00000551623 PPM1HQ9ULR3 514 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 ARHGEF10O15013 1369 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 AATKQ6ZMQ8 1374 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 E9PCH4 1651 aa3.62□□□□□ -1.83
PTCH1-223ENST00000551623 BCL9O00512 1426 aa3.61□□□□□ -1.83
PTCH1-223ENST00000551623 RBM47A0AV96 593 aaKnown RBP3.61□□□□□ -1.83
PTCH1-223ENST00000551623 PLSCR1O15162 318 aa3.61□□□□□ -1.83
PTCH1-223ENST00000551623 ZNF20P17024 532 aa3.61□□□□□ -1.83
PTCH1-223ENST00000551623 NCKAP1LP55160 1127 aa3.61□□□□□ -1.83
PTCH1-223ENST00000551623 CEP128Q6ZU80 1094 aa3.61□□□□□ -1.83
PTCH1-223ENST00000551623 Q8N1X5 172 aa3.61□□□□□ -1.83
PTCH1-223ENST00000551623 MAP6Q96JE9 813 aa3.61□□□□□ -1.83
PTCH1-223ENST00000551623 RBM15Q96T37 977 aaKnown RBP eCLIP3.61□□□□□ -1.83
PTCH1-223ENST00000551623 WDR26Q9H7D7 661 aa3.61□□□□□ -1.83
PTCH1-223ENST00000551623 RRP7BPQ9NSQ0 103 aa3.61□□□□□ -1.83
PTCH1-223ENST00000551623 CHD4Q14839 1912 aa3.61□□□□□ -1.83
PTCH1-223ENST00000551623 ADCY9O60503 1353 aa3.61□□□□□ -1.83
PTCH1-223ENST00000551623 COL14A1Q05707 1796 aaKnown RBP3.61□□□□□ -1.83
PTCH1-223ENST00000551623 ANKRD50Q9ULJ7 1429 aa3.61□□□□□ -1.83
PTCH1-223ENST00000551623 SHISA3A0PJX4 238 aa3.6□□□□□ -1.83
PTCH1-223ENST00000551623 FAM83GA6ND36 823 aa3.6□□□□□ -1.83
PTCH1-223ENST00000551623 LRRN2O75325 713 aa3.6□□□□□ -1.83
PTCH1-223ENST00000551623 MPOP05164 745 aa3.6□□□□□ -1.83
PTCH1-223ENST00000551623 PGRP06401 933 aa3.6□□□□□ -1.83
PTCH1-223ENST00000551623 CELA3AP09093 270 aa3.6□□□□□ -1.83
PTCH1-223ENST00000551623 RPL10P27635 214 aaKnown RBP3.6□□□□□ -1.83
PTCH1-223ENST00000551623 CNR2P34972 360 aa3.6□□□□□ -1.83
PTCH1-223ENST00000551623 ACVRL1P37023 503 aa3.6□□□□□ -1.83
PTCH1-223ENST00000551623 LIMS1P48059 325 aa3.6□□□□□ -1.83
PTCH1-223ENST00000551623 PRELPP51888 382 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms