RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 SRGAP2O75044 1071 aa14.57□□□□□ -0.08
CACNB3-219ENST00000551544 C16orf86Q6ZW13 317 aa14.57□□□□□ -0.08
CACNB3-219ENST00000551544 POTEDQ86YR6 584 aa14.57□□□□□ -0.08
CACNB3-219ENST00000551544 CNBD1Q8NA66 436 aa14.57□□□□□ -0.08
CACNB3-219ENST00000551544 SLC39A2Q9NP94 309 aa14.57□□□□□ -0.08
CACNB3-219ENST00000551544 RASSF10A6NK89 507 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 UFL1O94874 794 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 ATP1A1P05023 1023 aaKnown RBP14.56□□□□□ -0.08
CACNB3-219ENST00000551544 TUBB4BP68371 445 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 GPSM2P81274 684 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 GPS2Q13227 327 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 NEDD1Q8NHV4 660 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 JAKMIP2Q96AA8 810 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 NGLY1Q96IV0 654 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 C7orf25Q9BPX7 421 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 MAGEF1Q9HAY2 307 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 FRMPD2Q68DX3 1309 aaPredicted RBP14.56□□□□□ -0.08
CACNB3-219ENST00000551544 USP17L5A8MUK1 530 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 KRT83P78385 493 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 REXO1Q8N1G1 1221 aaKnown RBP14.56□□□□□ -0.08
CACNB3-219ENST00000551544 CALML4Q96GE6 196 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 CAPZA3Q96KX2 299 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 MMTAG2Q9BU76 263 aaKnown RBP14.56□□□□□ -0.08
CACNB3-219ENST00000551544 NHEJ1Q9H9Q4 299 aaPredicted RBP14.56□□□□□ -0.08
CACNB3-219ENST00000551544 CD209Q9NNX6 404 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 IPO7O95373 1038 aaKnown RBP14.56□□□□□ -0.08
CACNB3-219ENST00000551544 CYLC1P35663 651 aaPredicted RBP14.56□□□□□ -0.08
CACNB3-219ENST00000551544 AMPD3Q01432 767 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 CYP27A1Q02318 531 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 TRAPPC11Q7Z392 1133 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 LACRTQ9GZZ8 138 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 L1RE1Q9UN81 338 aa14.56□□□□□ -0.08
CACNB3-219ENST00000551544 SNED1Q8TER0 1413 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 RCCD1A6NED2 376 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 PSMD14O00487 310 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 MEA1Q16626 185 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 TRAPPC3LQ5T215 181 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 FAM114A1Q8IWE2 563 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 RPGRQ92834 1020 aaKnown RBP14.55□□□□□ -0.08
CACNB3-219ENST00000551544 NUP58Q9BVL2 599 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 TTYH3Q9C0H2 523 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 KRT86O43790 486 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 ZBED6P86452 979 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 RAD51AP2Q09MP3 1159 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 MIIPQ5JXC2 388 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 DYMQ7RTS9 669 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 KIAA0895Q8NCT3 520 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 COA7Q96BR5 231 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 SAR1BQ9Y6B6 198 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 DUSP10Q9Y6W6 482 aa14.55□□□□□ -0.08
CACNB3-219ENST00000551544 TNRC6CQ9HCJ0 1690 aaKnown RBP14.55□□□□□ -0.08
CACNB3-219ENST00000551544 GPR75-ASB3A0A0A6YYF3 556 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 MACROD2A1Z1Q3 448 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 N4BP1O75113 896 aaKnown RBP14.54□□□□□ -0.08
CACNB3-219ENST00000551544 EIF6P56537 245 aaKnown RBP14.54□□□□□ -0.08
CACNB3-219ENST00000551544 SEMA3FQ13275 785 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 MFSD14BQ5SR56 506 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 CNNM4Q6P4Q7 775 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 SV2BQ7L1I2 683 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 GPIHBP1Q8IV16 184 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 MMS19Q96T76 1030 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 SEMA6BQ9H3T3 888 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 PSD3Q9NYI0 1048 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 LRWD1Q9UFC0 647 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 ADAM21Q9UKJ8 722 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 ERCC3P19447 782 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 FKBP15Q5T1M5 1219 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 VPS18Q9P253 973 aa14.54□□□□□ -0.08
CACNB3-219ENST00000551544 COL24A1Q17RW2 1714 aa14.53□□□□□ -0.08
CACNB3-219ENST00000551544 GRB10Q13322 594 aa14.53□□□□□ -0.08
CACNB3-219ENST00000551544 CASP8Q14790 479 aa14.53□□□□□ -0.08
CACNB3-219ENST00000551544 CALCRLQ16602 461 aa14.53□□□□□ -0.08
CACNB3-219ENST00000551544 RETREG2Q8NC44 543 aa14.53□□□□□ -0.08
CACNB3-219ENST00000551544 CDK5RAP3Q96JB5 506 aa14.53□□□□□ -0.08
CACNB3-219ENST00000551544 GBP3Q9H0R5 595 aa14.53□□□□□ -0.08
CACNB3-219ENST00000551544 NAV1Q8NEY1 1877 aa14.53□□□□□ -0.08
CACNB3-219ENST00000551544 MYMKA6NI61 221 aa14.53□□□□□ -0.08
CACNB3-219ENST00000551544 EIF3JO75822 258 aaKnown RBP14.53□□□□□ -0.08
CACNB3-219ENST00000551544 PICALMQ13492 652 aa14.53□□□□□ -0.08
CACNB3-219ENST00000551544 FAM196AQ6ZSG2 479 aa14.53□□□□□ -0.08
CACNB3-219ENST00000551544 LRRC47Q8N1G4 583 aaKnown RBP14.53□□□□□ -0.08
CACNB3-219ENST00000551544 FEZ2Q9UHY8 353 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-219ENST00000551544 ZNF831Q5JPB2 1677 aa14.53□□□□□ -0.08
CACNB3-219ENST00000551544 SLC37A4O43826 429 aa14.52□□□□□ -0.08
CACNB3-219ENST00000551544 TDP2O95551 362 aa14.52□□□□□ -0.08
CACNB3-219ENST00000551544 PLEKP08567 350 aaPredicted RBP14.52□□□□□ -0.08
CACNB3-219ENST00000551544 IDEP14735 1019 aa14.52□□□□□ -0.08
CACNB3-219ENST00000551544 LMAN1P49257 510 aa14.52□□□□□ -0.08
CACNB3-219ENST00000551544 RHBDL3P58872 404 aa14.52□□□□□ -0.08
CACNB3-219ENST00000551544 CLEC10AQ8IUN9 316 aa14.52□□□□□ -0.08
CACNB3-219ENST00000551544 EHBP1Q8NDI1 1231 aa14.52□□□□□ -0.08
CACNB3-219ENST00000551544 CCDC102AQ96A19 550 aa14.52□□□□□ -0.08
CACNB3-219ENST00000551544 GPCPD1Q9NPB8 672 aa14.52□□□□□ -0.08
CACNB3-219ENST00000551544 FAM207AQ9NSI2 230 aaPredicted RBP14.52□□□□□ -0.08
CACNB3-219ENST00000551544 GGA1Q9UJY5 639 aa14.52□□□□□ -0.08
CACNB3-219ENST00000551544 POTEMA6NI47 508 aa14.52□□□□□ -0.09
CACNB3-219ENST00000551544 EIF3CLB5ME19 914 aaKnown RBP14.52□□□□□ -0.09
CACNB3-219ENST00000551544 PLCG2P16885 1265 aa14.52□□□□□ -0.09
CACNB3-219ENST00000551544 KRT26Q7Z3Y9 468 aa14.52□□□□□ -0.09
CACNB3-219ENST00000551544 CCDC170Q8IYT3 715 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms