RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 ACAD9Q9H845 621 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 RNF146Q9NTX7 359 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 BIN2Q9UBW5 565 aaPredicted RBP11.87□□□□□ -0.51
NEK3-203ENST00000551355 RCOR1Q9UKL0 485 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 FAM155AB1AL88 458 aaPredicted RBP11.86□□□□□ -0.51
NEK3-203ENST00000551355 LAD1O00515 517 aa11.86□□□□□ -0.51
NEK3-203ENST00000551355 ALDH1A1P00352 501 aa11.86□□□□□ -0.51
NEK3-203ENST00000551355 CFBP00751 764 aa11.86□□□□□ -0.51
NEK3-203ENST00000551355 GCFC2P16383 781 aaKnown RBP11.86□□□□□ -0.51
NEK3-203ENST00000551355 TM4SF4P48230 202 aa11.86□□□□□ -0.51
NEK3-203ENST00000551355 DEFB115Q30KQ5 88 aa11.86□□□□□ -0.51
NEK3-203ENST00000551355 FOXD4L6Q3SYB3 417 aaPredicted RBP11.86□□□□□ -0.51
NEK3-203ENST00000551355 JAKMIP3Q5VZ66 844 aa11.86□□□□□ -0.51
NEK3-203ENST00000551355 FOXD4L3Q6VB84 417 aaPredicted RBP11.86□□□□□ -0.51
NEK3-203ENST00000551355 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.86□□□□□ -0.51
NEK3-203ENST00000551355 NEK8Q86SG6 692 aa11.86□□□□□ -0.51
NEK3-203ENST00000551355 GPRC5AQ8NFJ5 357 aa11.86□□□□□ -0.51
NEK3-203ENST00000551355 MROH8Q9H579 483 aa11.86□□□□□ -0.51
NEK3-203ENST00000551355 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.86□□□□□ -0.51
NEK3-203ENST00000551355 PFASO15067 1338 aa11.86□□□□□ -0.51
NEK3-203ENST00000551355 OPLAHO14841 1288 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 PPP6R2O75170 966 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 SLC39A14Q15043 492 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 STK38Q15208 465 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 SF3A1Q15459 793 aaKnown RBP11.85□□□□□ -0.51
NEK3-203ENST00000551355 TTC38Q5R3I4 469 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 PPP4R3AQ6IN85 833 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 FAM173BQ6P4H8 233 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 USP17L6PQ6QN14 398 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 MOXD1Q6UVY6 613 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 RNF207Q6ZRF8 634 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 IFNL1Q8IU54 200 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 FAM43AQ8N2R8 423 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 LINC00301Q8NCQ3 95 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 RASGRP4Q8TDF6 673 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 TBCKQ8TEA7 893 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 LEO1Q8WVC0 666 aaPredicted RBP11.85□□□□□ -0.51
NEK3-203ENST00000551355 USP28Q96RU2 1077 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 PTPN18Q99952 460 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 ANO3Q9BYT9 981 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 BTBD7Q9P203 1132 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 TFIP11Q9UBB9 837 aaKnown RBP11.85□□□□□ -0.51
NEK3-203ENST00000551355 RBPJLQ9UBG7 517 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 MORF4L1Q9UBU8 362 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 CNPY2Q9Y2B0 182 aa11.85□□□□□ -0.51
NEK3-203ENST00000551355 GOLGA6L4A6NEF3 574 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 B4DLN1 442 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 NFIBO00712 420 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 SPTLC2O15270 562 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 FIBPO43427 364 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 CYP3A4P08684 503 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 SREBF1P36956 1147 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 TOB1P50616 345 aaPredicted RBP11.84□□□□□ -0.51
NEK3-203ENST00000551355 ERVK-9P63128 1117 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 ERVK-24P63145 666 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 NFKBIBQ15653 356 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 UBE2SQ16763 222 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 FAM110CQ1W6H9 321 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 INF2Q27J81 1249 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 SKOR2Q2VWA4 1001 aaPredicted RBP11.84□□□□□ -0.51
NEK3-203ENST00000551355 EARS2Q5JPH6 523 aaKnown RBP11.84□□□□□ -0.51
NEK3-203ENST00000551355 ARL6IP4Q66PJ3 421 aaKnown RBP11.84□□□□□ -0.51
NEK3-203ENST00000551355 XRRA1Q6P2D8 792 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 PAXIP1Q6ZW49 1069 aaPredicted RBP11.84□□□□□ -0.51
NEK3-203ENST00000551355 PAGR1Q9BTK6 254 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 MOV10L1Q9BXT6 1211 aaKnown RBP11.84□□□□□ -0.51
NEK3-203ENST00000551355 ZFYVE28Q9HCC9 887 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 HOMER2Q9NSB8 354 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 TMEM260Q9NX78 707 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 RIPK3Q9Y572 518 aa11.84□□□□□ -0.51
NEK3-203ENST00000551355 CYP3A7-CYP3A51PA0A087WV96 503 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 STRNO43815 780 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 PRPF40AO75400 957 aaKnown RBP11.83□□□□□ -0.52
NEK3-203ENST00000551355 CNMDO75829 334 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 CYP2C8P10632 490 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 CYP3A7P24462 503 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 HOXA13P31271 388 aaPredicted RBP11.83□□□□□ -0.52
NEK3-203ENST00000551355 UBE2HP62256 183 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 RPS6P62753 249 aaKnown RBP11.83□□□□□ -0.52
NEK3-203ENST00000551355 ARHGAP4P98171 946 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 LETM2Q2VYF4 491 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 MUM1L1Q5H9M0 696 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 NSMFQ6X4W1 530 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 FCHSD1Q86WN1 690 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 NCAPG2Q86XI2 1143 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 CCAR1Q8IX12 1150 aaKnown RBP11.83□□□□□ -0.52
NEK3-203ENST00000551355 ABRAQ8N0Z2 381 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 ANKRD35Q8N283 1001 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 DNERQ8NFT8 737 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 SYTL5Q8TDW5 730 aaPredicted RBP11.83□□□□□ -0.52
NEK3-203ENST00000551355 FERMT2Q96AC1 680 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 MPHOSPH6Q99547 160 aaKnown RBP11.83□□□□□ -0.52
NEK3-203ENST00000551355 PCDHB6Q9Y5E3 794 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 CLIC4Q9Y696 253 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 MYH6P13533 1939 aa11.83□□□□□ -0.52
NEK3-203ENST00000551355 BAZ2BQ9UIF8 2168 aaKnown RBP11.82□□□□□ -0.52
NEK3-203ENST00000551355 PTPRFP10586 1907 aa11.82□□□□□ -0.52
NEK3-203ENST00000551355 LOC102724159A0A0B4J2E5 919 aa11.82□□□□□ -0.52
NEK3-203ENST00000551355 IGF2BP3O00425 579 aaKnown RBP eCLIP11.82□□□□□ -0.52
NEK3-203ENST00000551355 ADAMTS3O15072 1205 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms