RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 ZNF654Q8IZM8 581 aa22.07■■□□□ 1.12
DDX54-208ENST00000551344 PCSK9Q8NBP7 692 aaKnown RBP22.07■■□□□ 1.12
DDX54-208ENST00000551344 NUP133Q8WUM0 1156 aa22.07■■□□□ 1.12
DDX54-208ENST00000551344 FERMT2Q96AC1 680 aa22.07■■□□□ 1.12
DDX54-208ENST00000551344 NEK1Q96PY6 1258 aa22.07■■□□□ 1.12
DDX54-208ENST00000551344 UPF3AQ9H1J1 476 aaKnown RBP22.07■■□□□ 1.12
DDX54-208ENST00000551344 CCDC69A6NI79 296 aa22.06■■□□□ 1.12
DDX54-208ENST00000551344 C6orf222P0C671 652 aaPredicted RBP22.06■■□□□ 1.12
DDX54-208ENST00000551344 SMARCA1P28370 1054 aa22.06■■□□□ 1.12
DDX54-208ENST00000551344 KRT32Q14532 448 aa22.06■■□□□ 1.12
DDX54-208ENST00000551344 SNX17Q15036 470 aa22.06■■□□□ 1.12
DDX54-208ENST00000551344 KCNA10Q16322 511 aa22.06■■□□□ 1.12
DDX54-208ENST00000551344 NFXL1Q6ZNB6 911 aa22.06■■□□□ 1.12
DDX54-208ENST00000551344 NOL8Q76FK4 1167 aaKnown RBP22.06■■□□□ 1.12
DDX54-208ENST00000551344 EEPD1Q7L9B9 569 aa22.06■■□□□ 1.12
DDX54-208ENST00000551344 CTCFLQ8NI51 663 aaPredicted RBP22.06■■□□□ 1.12
DDX54-208ENST00000551344 TBC1D5Q92609 795 aa22.06■■□□□ 1.12
DDX54-208ENST00000551344 LZTS2Q9BRK4 669 aa22.06■■□□□ 1.12
DDX54-208ENST00000551344 PRO3102Q9H379 93 aa22.06■■□□□ 1.12
DDX54-208ENST00000551344 GPHNQ9NQX3 736 aaPredicted RBP22.06■■□□□ 1.12
DDX54-208ENST00000551344 MAP3K20Q9NYL2 800 aaKnown RBP22.06■■□□□ 1.12
DDX54-208ENST00000551344 ZMYND8Q9ULU4 1186 aaPredicted RBP22.06■■□□□ 1.12
DDX54-208ENST00000551344 GNEQ9Y223 722 aaKnown RBP22.06■■□□□ 1.12
DDX54-208ENST00000551344 Q9Y3F1 56 aa22.06■■□□□ 1.12
DDX54-208ENST00000551344 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.05■■□□□ 1.12
DDX54-208ENST00000551344 CYTH3O43739 400 aa22.05■■□□□ 1.12
DDX54-208ENST00000551344 EDNRBP24530 442 aa22.05■■□□□ 1.12
DDX54-208ENST00000551344 GNAQP50148 359 aa22.05■■□□□ 1.12
DDX54-208ENST00000551344 ACLYP53396 1101 aa22.05■■□□□ 1.12
DDX54-208ENST00000551344 RTP1P59025 263 aa22.05■■□□□ 1.12
DDX54-208ENST00000551344 SLC35G1Q2M3R5 365 aa22.05■■□□□ 1.12
DDX54-208ENST00000551344 FBXO16Q8IX29 292 aaPredicted RBP22.05■■□□□ 1.12
DDX54-208ENST00000551344 SAMD3Q8N6K7 520 aa22.05■■□□□ 1.12
DDX54-208ENST00000551344 SYTL5Q8TDW5 730 aaPredicted RBP22.05■■□□□ 1.12
DDX54-208ENST00000551344 PDGFCQ9NRA1 345 aa22.05■■□□□ 1.12
DDX54-208ENST00000551344 PCDHA1Q9Y5I3 950 aa22.05■■□□□ 1.12
DDX54-208ENST00000551344 DDX49Q9Y6V7 483 aaKnown RBP22.05■■□□□ 1.12
DDX54-208ENST00000551344 PNMA6FA0A0J9YX94 578 aa22.04■■□□□ 1.12
DDX54-208ENST00000551344 A0A1W2PQ45 241 aaPredicted RBP22.04■■□□□ 1.12
DDX54-208ENST00000551344 A0A1W2PQY0 241 aa22.04■■□□□ 1.12
DDX54-208ENST00000551344 CALM1P0DP23 149 aa22.04■■□□□ 1.12
DDX54-208ENST00000551344 CALM2P0DP24 149 aa22.04■■□□□ 1.12
DDX54-208ENST00000551344 CALM3P0DP25 149 aa22.04■■□□□ 1.12
DDX54-208ENST00000551344 SMPD1P17405 629 aa22.04■■□□□ 1.12
DDX54-208ENST00000551344 SYN1P17600 705 aa22.04■■□□□ 1.12
DDX54-208ENST00000551344 PDE4DQ08499 809 aa22.04■■□□□ 1.12
DDX54-208ENST00000551344 COL9A3Q14050 684 aaPredicted RBP22.04■■□□□ 1.12
DDX54-208ENST00000551344 GNASQ5JWF2 1037 aa22.04■■□□□ 1.12
DDX54-208ENST00000551344 DHX32Q7L7V1 743 aaKnown RBP22.04■■□□□ 1.12
DDX54-208ENST00000551344 RASEFQ8IZ41 740 aa22.04■■□□□ 1.12
DDX54-208ENST00000551344 PIGSQ96S52 555 aa22.04■■□□□ 1.12
DDX54-208ENST00000551344 RBM27Q9P2N5 1060 aaKnown RBP22.04■■□□□ 1.12
DDX54-208ENST00000551344 RBM47A0AV96 593 aaKnown RBP22.03■■□□□ 1.12
DDX54-208ENST00000551344 PPP1R11O60927 126 aaPredicted RBP22.03■■□□□ 1.12
DDX54-208ENST00000551344 BMP8BP34820 402 aa22.03■■□□□ 1.12
DDX54-208ENST00000551344 EXOSC10Q01780 885 aaKnown RBP22.03■■□□□ 1.12
DDX54-208ENST00000551344 GHRHRQ02643 423 aa22.03■■□□□ 1.12
DDX54-208ENST00000551344 SGMS1Q86VZ5 419 aa22.03■■□□□ 1.12
DDX54-208ENST00000551344 HOMER1Q86YM7 354 aa22.03■■□□□ 1.12
DDX54-208ENST00000551344 NSUN6Q8TEA1 469 aaKnown RBP22.03■■□□□ 1.12
DDX54-208ENST00000551344 KCNB2Q92953 911 aa22.03■■□□□ 1.12
DDX54-208ENST00000551344 GDF15Q99988 308 aa22.03■■□□□ 1.12
DDX54-208ENST00000551344 AP5M1Q9H0R1 490 aa22.03■■□□□ 1.12
DDX54-208ENST00000551344 ATP11BQ9Y2G3 1177 aa22.03■■□□□ 1.12
DDX54-208ENST00000551344 SLC12A7Q9Y666 1083 aa22.03■■□□□ 1.12
DDX54-208ENST00000551344 MYADML2A6NDP7 307 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 CTAGE5O15320 804 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 DYNC1LI2O43237 492 aaPredicted RBP22.02■■□□□ 1.12
DDX54-208ENST00000551344 REC8O95072 547 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 CFBP00751 764 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 HMGB1P09429 215 aaKnown RBP22.02■■□□□ 1.12
DDX54-208ENST00000551344 DUSP28Q4G0W2 176 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 GLT1D1Q96MS3 346 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 TAAR1Q96RJ0 339 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 IWS1Q96ST2 819 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 MYL10Q9BUA6 226 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 SPZ1Q9BXG8 430 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 WDR11Q9BZH6 1224 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 STARD7Q9NQZ5 370 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 PRKAG2Q9UGJ0 569 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 ELP1O95163 1332 aa22.02■■□□□ 1.12
DDX54-208ENST00000551344 LCTP09848 1927 aa22.02■■□□□ 1.11
DDX54-208ENST00000551344 A0A1W2PPC1 479 aa22.01■■□□□ 1.11
DDX54-208ENST00000551344 OPLAHO14841 1288 aa22.01■■□□□ 1.11
DDX54-208ENST00000551344 ASGR1P07306 291 aa22.01■■□□□ 1.11
DDX54-208ENST00000551344 HSD17B4P51659 736 aa22.01■■□□□ 1.11
DDX54-208ENST00000551344 TRIM60Q495X7 471 aa22.01■■□□□ 1.11
DDX54-208ENST00000551344 SYNE3Q6ZMZ3 975 aa22.01■■□□□ 1.11
DDX54-208ENST00000551344 TLK2Q86UE8 772 aa22.01■■□□□ 1.11
DDX54-208ENST00000551344 RMDN3Q96TC7 470 aa22.01■■□□□ 1.11
DDX54-208ENST00000551344 LRRC2Q9BYS8 371 aa22.01■■□□□ 1.11
DDX54-208ENST00000551344 COL20A1Q9P218 1284 aa22.01■■□□□ 1.11
DDX54-208ENST00000551344 BAZ2BQ9UIF8 2168 aaKnown RBP22.01■■□□□ 1.11
DDX54-208ENST00000551344 EPB41L2O43491 1005 aaKnown RBP22■■□□□ 1.11
DDX54-208ENST00000551344 ZEB2O60315 1214 aa22■■□□□ 1.11
DDX54-208ENST00000551344 HSPA4P34932 840 aa22■■□□□ 1.11
DDX54-208ENST00000551344 IRX5P78411 483 aaPredicted RBP22■■□□□ 1.11
DDX54-208ENST00000551344 ADCK5Q3MIX3 580 aa22■■□□□ 1.11
DDX54-208ENST00000551344 FANCBQ8NB91 859 aa22■■□□□ 1.11
DDX54-208ENST00000551344 SCFD2Q8WU76 684 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms