RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 RPGRIP1Q96KN7 1286 aa13.7□□□□□ -0.22
GPN3-208ENST00000550974 DDX49Q9Y6V7 483 aaKnown RBP13.7□□□□□ -0.22
GPN3-208ENST00000550974 MCM3APO60318 1980 aa13.7□□□□□ -0.22
GPN3-208ENST00000550974 TET1Q8NFU7 2136 aa13.7□□□□□ -0.22
GPN3-208ENST00000550974 EPG5Q9HCE0 2579 aa13.7□□□□□ -0.22
GPN3-208ENST00000550974 CHMP4BP1P59074 171 aa13.69□□□□□ -0.22
GPN3-208ENST00000550974 CBX2Q14781 532 aaPredicted RBP13.69□□□□□ -0.22
GPN3-208ENST00000550974 TMEM192Q8IY95 271 aa13.69□□□□□ -0.22
GPN3-208ENST00000550974 KCNG4Q8TDN1 519 aa13.69□□□□□ -0.22
GPN3-208ENST00000550974 AFAP1L1Q8TED9 768 aa13.69□□□□□ -0.22
GPN3-208ENST00000550974 MTG1Q9BT17 334 aaPredicted RBP13.69□□□□□ -0.22
GPN3-208ENST00000550974 RAVER2Q9HCJ3 691 aaKnown RBP13.69□□□□□ -0.22
GPN3-208ENST00000550974 SALL2Q9Y467 1007 aaPredicted RBP13.69□□□□□ -0.22
GPN3-208ENST00000550974 CTDP1Q9Y5B0 961 aaPredicted RBP13.69□□□□□ -0.22
GPN3-208ENST00000550974 RIF1Q5UIP0 2472 aaKnown RBP13.68□□□□□ -0.22
GPN3-208ENST00000550974 E9PSI1 815 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 NBNO60934 754 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 EFCAB14O75071 495 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 CSPG5O95196 566 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 AKR1B1P15121 316 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 NDUFV1P49821 464 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 TTC39AQ5SRH9 613 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 TAPT1Q6NXT6 567 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 NFRKBQ6P4R8 1299 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 KIAA1211Q6ZU35 1233 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 LRRC8DQ7L1W4 858 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 FBXO11Q86XK2 927 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 FBXO16Q8IX29 292 aaPredicted RBP13.68□□□□□ -0.22
GPN3-208ENST00000550974 MYOCDQ8IZQ8 938 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 CCDC155Q8N6L0 562 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 SLF1Q9BQI6 1058 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 PIH1D3Q9NQM4 214 aaKnown RBP13.68□□□□□ -0.22
GPN3-208ENST00000550974 INCENPQ9NQS7 918 aa13.68□□□□□ -0.22
GPN3-208ENST00000550974 ASB14A6NK59 587 aa13.67□□□□□ -0.22
GPN3-208ENST00000550974 CXCL10P02778 98 aa13.67□□□□□ -0.22
GPN3-208ENST00000550974 EEF2P13639 858 aaKnown RBP13.67□□□□□ -0.22
GPN3-208ENST00000550974 SELPP16109 830 aa13.67□□□□□ -0.22
GPN3-208ENST00000550974 ICAM3P32942 547 aa13.67□□□□□ -0.22
GPN3-208ENST00000550974 HTRA4P83105 476 aaPredicted RBP13.67□□□□□ -0.22
GPN3-208ENST00000550974 ACAP1Q15027 740 aa13.67□□□□□ -0.22
GPN3-208ENST00000550974 PTGISQ16647 500 aa13.67□□□□□ -0.22
GPN3-208ENST00000550974 PTPN21Q16825 1174 aa13.67□□□□□ -0.22
GPN3-208ENST00000550974 ZBTB33Q86T24 672 aa13.67□□□□□ -0.22
GPN3-208ENST00000550974 CERS3Q8IU89 383 aa13.67□□□□□ -0.22
GPN3-208ENST00000550974 CAGE1Q8TC20 777 aa13.67□□□□□ -0.22
GPN3-208ENST00000550974 SP7Q8TDD2 431 aaPredicted RBP13.67□□□□□ -0.22
GPN3-208ENST00000550974 NUP88Q99567 741 aaPredicted RBP13.67□□□□□ -0.22
GPN3-208ENST00000550974 GOPCQ9HD26 462 aa13.67□□□□□ -0.22
GPN3-208ENST00000550974 FBXO40Q9UH90 709 aa13.67□□□□□ -0.22
GPN3-208ENST00000550974 ZBED4O75132 1171 aa13.66□□□□□ -0.22
GPN3-208ENST00000550974 IDH1O75874 414 aaKnown RBP13.66□□□□□ -0.22
GPN3-208ENST00000550974 EYA4O95677 639 aa13.66□□□□□ -0.22
GPN3-208ENST00000550974 CPT1AP50416 773 aa13.66□□□□□ -0.22
GPN3-208ENST00000550974 RRP1P56182 461 aaKnown RBP13.66□□□□□ -0.22
GPN3-208ENST00000550974 MRPL50Q8N5N7 158 aaKnown RBP13.66□□□□□ -0.22
GPN3-208ENST00000550974 FAM133AQ8N9E0 248 aa13.66□□□□□ -0.22
GPN3-208ENST00000550974 CHST13Q8NET6 341 aa13.66□□□□□ -0.22
GPN3-208ENST00000550974 YME1L1Q96TA2 773 aa13.66□□□□□ -0.22
GPN3-208ENST00000550974 HOMER2Q9NSB8 354 aa13.66□□□□□ -0.22
GPN3-208ENST00000550974 MCM9Q9NXL9 1143 aa13.66□□□□□ -0.22
GPN3-208ENST00000550974 DLL3Q9NYJ7 618 aa13.66□□□□□ -0.22
GPN3-208ENST00000550974 PTPRCP08575 1304 aa13.65□□□□□ -0.22
GPN3-208ENST00000550974 ATP2A1O14983 1001 aa13.65□□□□□ -0.22
GPN3-208ENST00000550974 AMHP03971 560 aa13.65□□□□□ -0.22
GPN3-208ENST00000550974 ZAP70P43403 619 aa13.65□□□□□ -0.22
GPN3-208ENST00000550974 PTPN11Q06124 597 aaPredicted RBP13.65□□□□□ -0.22
GPN3-208ENST00000550974 ADAM15Q13444 863 aa13.65□□□□□ -0.22
GPN3-208ENST00000550974 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.65□□□□□ -0.22
GPN3-208ENST00000550974 WDR63Q8IWG1 891 aa13.65□□□□□ -0.22
GPN3-208ENST00000550974 MSLNLQ96KJ4 702 aa13.65□□□□□ -0.22
GPN3-208ENST00000550974 PHF7Q9BWX1 381 aaPredicted RBP13.65□□□□□ -0.22
GPN3-208ENST00000550974 PCDHGC5Q9Y5F6 944 aa13.65□□□□□ -0.22
GPN3-208ENST00000550974 USP17L12C9JPN9 530 aa13.64□□□□□ -0.23
GPN3-208ENST00000550974 USP17L21D6R901 530 aa13.64□□□□□ -0.23
GPN3-208ENST00000550974 GRM6O15303 877 aa13.64□□□□□ -0.23
GPN3-208ENST00000550974 PARNO95453 639 aaKnown RBP13.64□□□□□ -0.23
GPN3-208ENST00000550974 CYP2D6P10635 497 aa13.64□□□□□ -0.23
GPN3-208ENST00000550974 CCDC158Q5M9N0 1113 aa13.64□□□□□ -0.23
GPN3-208ENST00000550974 PRPF38AQ8NAV1 312 aaKnown RBP13.64□□□□□ -0.23
GPN3-208ENST00000550974 OR6J1Q8NGC5 347 aa13.64□□□□□ -0.23
GPN3-208ENST00000550974 DYNLL2Q96FJ2 89 aa13.64□□□□□ -0.23
GPN3-208ENST00000550974 SWAP70Q9UH65 585 aa13.64□□□□□ -0.23
GPN3-208ENST00000550974 COG6Q9Y2V7 657 aa13.64□□□□□ -0.23
GPN3-208ENST00000550974 USP15Q9Y4E8 981 aaPredicted RBP13.64□□□□□ -0.23
GPN3-208ENST00000550974 UPP2O95045 317 aa13.63□□□□□ -0.23
GPN3-208ENST00000550974 CKBP12277 381 aa13.63□□□□□ -0.23
GPN3-208ENST00000550974 DUSP28Q4G0W2 176 aa13.63□□□□□ -0.23
GPN3-208ENST00000550974 SMRP1Q8NCR6 262 aa13.63□□□□□ -0.23
GPN3-208ENST00000550974 KIFC2Q96AC6 838 aa13.63□□□□□ -0.23
GPN3-208ENST00000550974 CHAMP1Q96JM3 812 aa13.63□□□□□ -0.23
GPN3-208ENST00000550974 HINFPQ9BQA5 517 aa13.63□□□□□ -0.23
GPN3-208ENST00000550974 CLEC1BQ9P126 229 aa13.63□□□□□ -0.23
GPN3-208ENST00000550974 NCOR2Q9Y618 2525 aa13.63□□□□□ -0.23
GPN3-208ENST00000550974 SRGAP3O43295 1099 aa13.62□□□□□ -0.23
GPN3-208ENST00000550974 IGSF3O75054 1194 aa13.62□□□□□ -0.23
GPN3-208ENST00000550974 LMNAP02545 664 aaKnown RBP13.62□□□□□ -0.23
GPN3-208ENST00000550974 CTNNB1P35222 781 aa13.62□□□□□ -0.23
GPN3-208ENST00000550974 RSPO4Q2I0M5 234 aaPredicted RBP13.62□□□□□ -0.23
GPN3-208ENST00000550974 DHX38Q92620 1227 aaKnown RBP13.62□□□□□ -0.23
GPN3-208ENST00000550974 CTAGE1Q96RT6 745 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms