RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 PBX4Q9BYU1 374 aa24.31■■□□□ 1.48
CACNB3-218ENST00000550771 PTPDC1A2A3K4 754 aa24.3■■□□□ 1.48
CACNB3-218ENST00000550771 TRIM6-TRIM34B2RNG4 842 aa24.3■■□□□ 1.48
CACNB3-218ENST00000550771 SNHG28P0DPA3 235 aa24.3■■□□□ 1.48
CACNB3-218ENST00000550771 HAND2P61296 217 aa24.3■■□□□ 1.48
CACNB3-218ENST00000550771 ZNF543Q08ER8 600 aa24.3■■□□□ 1.48
CACNB3-218ENST00000550771 CLEC4DQ8WXI8 215 aa24.3■■□□□ 1.48
CACNB3-218ENST00000550771 WDR11Q9BZH6 1224 aa24.3■■□□□ 1.48
CACNB3-218ENST00000550771 LNPKQ9C0E8 428 aa24.3■■□□□ 1.48
CACNB3-218ENST00000550771 MTIF3Q9H2K0 278 aaKnown RBP24.3■■□□□ 1.48
CACNB3-218ENST00000550771 RNF41Q9H4P4 317 aaPredicted RBP24.3■■□□□ 1.48
CACNB3-218ENST00000550771 WDR19Q8NEZ3 1342 aa24.3■■□□□ 1.48
CACNB3-218ENST00000550771 EYSQ5T1H1 3165 aa24.29■■□□□ 1.48
CACNB3-218ENST00000550771 RBM47A0AV96 593 aaKnown RBP24.29■■□□□ 1.48
CACNB3-218ENST00000550771 B4GALT4O60513 344 aa24.29■■□□□ 1.48
CACNB3-218ENST00000550771 NT5C2P49902 561 aa24.29■■□□□ 1.48
CACNB3-218ENST00000550771 MFAP1P55081 439 aaKnown RBP24.29■■□□□ 1.48
CACNB3-218ENST00000550771 RNF207Q6ZRF8 634 aa24.29■■□□□ 1.48
CACNB3-218ENST00000550771 NOC4LQ9BVI4 516 aaKnown RBP24.29■■□□□ 1.48
CACNB3-218ENST00000550771 GRXCR1A8MXD5 290 aa24.28■■□□□ 1.48
CACNB3-218ENST00000550771 PBX2P40425 430 aa24.28■■□□□ 1.48
CACNB3-218ENST00000550771 PSMC6P62333 389 aa24.28■■□□□ 1.48
CACNB3-218ENST00000550771 SMC5Q8IY18 1101 aa24.28■■□□□ 1.48
CACNB3-218ENST00000550771 MPHOSPH6Q99547 160 aaKnown RBP24.28■■□□□ 1.48
CACNB3-218ENST00000550771 TRPV6Q9H1D0 765 aa24.28■■□□□ 1.48
CACNB3-218ENST00000550771 POLR3EQ9NVU0 708 aa24.28■■□□□ 1.48
CACNB3-218ENST00000550771 LCTP09848 1927 aa24.27■■□□□ 1.48
CACNB3-218ENST00000550771 FGBP02675 491 aa24.27■■□□□ 1.48
CACNB3-218ENST00000550771 CALML3P27482 149 aa24.27■■□□□ 1.48
CACNB3-218ENST00000550771 CPT1AP50416 773 aa24.27■■□□□ 1.48
CACNB3-218ENST00000550771 RAB30Q15771 203 aa24.27■■□□□ 1.48
CACNB3-218ENST00000550771 SLC30A10Q6XR72 485 aa24.27■■□□□ 1.48
CACNB3-218ENST00000550771 TBC1D10CQ8IV04 446 aa24.27■■□□□ 1.48
CACNB3-218ENST00000550771 ESR2Q92731 530 aa24.27■■□□□ 1.48
CACNB3-218ENST00000550771 RILPL2Q969X0 211 aa24.27■■□□□ 1.48
CACNB3-218ENST00000550771 ALDH8A1Q9H2A2 487 aaPredicted RBP24.27■■□□□ 1.48
CACNB3-218ENST00000550771 UMODL1Q5DID0 1318 aa24.27■■□□□ 1.48
CACNB3-218ENST00000550771 NKRFO15226 690 aaKnown RBP eCLIP24.26■■□□□ 1.47
CACNB3-218ENST00000550771 SDSP20132 328 aa24.26■■□□□ 1.47
CACNB3-218ENST00000550771 EDNRBP24530 442 aa24.26■■□□□ 1.47
CACNB3-218ENST00000550771 RPS6P62753 249 aaKnown RBP24.26■■□□□ 1.47
CACNB3-218ENST00000550771 GPATCH4Q5T3I0 446 aaKnown RBP24.26■■□□□ 1.47
CACNB3-218ENST00000550771 DGKHQ86XP1 1220 aa24.26■■□□□ 1.47
CACNB3-218ENST00000550771 DNERQ8NFT8 737 aa24.26■■□□□ 1.47
CACNB3-218ENST00000550771 CXXC1Q9P0U4 656 aaPredicted RBP24.26■■□□□ 1.47
CACNB3-218ENST00000550771 SUPT20HL2P0C7V6 817 aa24.25■■□□□ 1.47
CACNB3-218ENST00000550771 CCL23P55773 120 aa24.25■■□□□ 1.47
CACNB3-218ENST00000550771 PURAQ00577 322 aaKnown RBP24.25■■□□□ 1.47
CACNB3-218ENST00000550771 RPUSD2Q8IZ73 545 aaKnown RBP24.25■■□□□ 1.47
CACNB3-218ENST00000550771 WNT8AQ9H1J5 351 aa24.25■■□□□ 1.47
CACNB3-218ENST00000550771 RWDD1Q9H446 243 aaPredicted RBP24.25■■□□□ 1.47
CACNB3-218ENST00000550771 OSBPL3Q9H4L5 887 aa24.25■■□□□ 1.47
CACNB3-218ENST00000550771 MSRAQ9UJ68 235 aa24.25■■□□□ 1.47
CACNB3-218ENST00000550771 VCANP13611 3396 aa24.24■■□□□ 1.47
CACNB3-218ENST00000550771 ZNF213O14771 459 aa24.24■■□□□ 1.47
CACNB3-218ENST00000550771 PDE4DQ08499 809 aa24.24■■□□□ 1.47
CACNB3-218ENST00000550771 BRDTQ58F21 947 aaPredicted RBP24.24■■□□□ 1.47
CACNB3-218ENST00000550771 RGS22Q8NE09 1264 aa24.24■■□□□ 1.47
CACNB3-218ENST00000550771 OR6J1Q8NGC5 347 aa24.24■■□□□ 1.47
CACNB3-218ENST00000550771 SCFD2Q8WU76 684 aa24.24■■□□□ 1.47
CACNB3-218ENST00000550771 GAS2L1Q99501 681 aaPredicted RBP24.24■■□□□ 1.47
CACNB3-218ENST00000550771 MTG1Q9BT17 334 aaPredicted RBP24.24■■□□□ 1.47
CACNB3-218ENST00000550771 MAF1Q9H063 256 aa24.24■■□□□ 1.47
CACNB3-218ENST00000550771 B4DLN1 442 aa24.23■■□□□ 1.47
CACNB3-218ENST00000550771 MRPL12P52815 198 aaKnown RBP24.23■■□□□ 1.47
CACNB3-218ENST00000550771 PPP2R5BQ15173 497 aa24.23■■□□□ 1.47
CACNB3-218ENST00000550771 CCDC178Q5BJE1 867 aa24.23■■□□□ 1.47
CACNB3-218ENST00000550771 OTOP2Q7RTS6 562 aa24.23■■□□□ 1.47
CACNB3-218ENST00000550771 SYMPKQ92797 1274 aaKnown RBP24.23■■□□□ 1.47
CACNB3-218ENST00000550771 GPHNQ9NQX3 736 aaPredicted RBP24.23■■□□□ 1.47
CACNB3-218ENST00000550771 NEDD4P46934 1319 aa24.23■■□□□ 1.47
CACNB3-218ENST00000550771 RAD50Q92878 1312 aa24.23■■□□□ 1.47
CACNB3-218ENST00000550771 KPNA6O60684 536 aa24.22■■□□□ 1.47
CACNB3-218ENST00000550771 MYL3P08590 195 aa24.22■■□□□ 1.47
CACNB3-218ENST00000550771 CHD1LQ86WJ1 897 aa24.22■■□□□ 1.47
CACNB3-218ENST00000550771 IQCA1Q86XH1 822 aa24.22■■□□□ 1.47
CACNB3-218ENST00000550771 PLEKHM2Q8IWE5 1019 aa24.22■■□□□ 1.47
CACNB3-218ENST00000550771 USP38Q8NB14 1042 aa24.22■■□□□ 1.47
CACNB3-218ENST00000550771 ANKS1AQ92625 1134 aa24.22■■□□□ 1.47
CACNB3-218ENST00000550771 TRMT13Q9NUP7 481 aaKnown RBP24.22■■□□□ 1.47
CACNB3-218ENST00000550771 TNKSO95271 1327 aa24.21■■□□□ 1.47
CACNB3-218ENST00000550771 PRUNE2Q8WUY3 3088 aa24.21■■□□□ 1.47
CACNB3-218ENST00000550771 PFKMP08237 780 aa24.21■■□□□ 1.47
CACNB3-218ENST00000550771 B4GALNT3Q6L9W6 998 aa24.21■■□□□ 1.47
CACNB3-218ENST00000550771 ZKSCAN3Q9BRR0 538 aa24.21■■□□□ 1.47
CACNB3-218ENST00000550771 A6NJR5 290 aa24.2■■□□□ 1.46
CACNB3-218ENST00000550771 GOLGA8HP0CJ92 632 aa24.2■■□□□ 1.46
CACNB3-218ENST00000550771 NUCB1Q02818 461 aa24.2■■□□□ 1.46
CACNB3-218ENST00000550771 NFRKBQ6P4R8 1299 aa24.2■■□□□ 1.46
CACNB3-218ENST00000550771 VWCEQ96DN2 955 aa24.2■■□□□ 1.46
CACNB3-218ENST00000550771 PRDM12Q9H4Q4 367 aa24.2■■□□□ 1.46
CACNB3-218ENST00000550771 HIP1O00291 1037 aa24.19■■□□□ 1.46
CACNB3-218ENST00000550771 TTLL4Q14679 1199 aa24.19■■□□□ 1.46
CACNB3-218ENST00000550771 USH1GQ495M9 461 aa24.19■■□□□ 1.46
CACNB3-218ENST00000550771 CWC27Q6UX04 472 aaKnown RBP24.19■■□□□ 1.46
CACNB3-218ENST00000550771 PNMA1Q8ND90 353 aa24.19■■□□□ 1.46
CACNB3-218ENST00000550771 SCLYQ96I15 445 aa24.19■■□□□ 1.46
CACNB3-218ENST00000550771 UBA5Q9GZZ9 404 aa24.19■■□□□ 1.46
CACNB3-218ENST00000550771 NKX2-4Q9H2Z4 354 aa24.19■■□□□ 1.46
CACNB3-218ENST00000550771 SLC28A3Q9HAS3 691 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms