RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 HERVK_113Q902F9 699 aa27.13■■□□□ 1.93
SMARCD1-209ENST00000550477 RILPL2Q969X0 211 aa27.13■■□□□ 1.93
SMARCD1-209ENST00000550477 CRBNQ96SW2 442 aa27.13■■□□□ 1.93
SMARCD1-209ENST00000550477 WDR11Q9BZH6 1224 aa27.13■■□□□ 1.93
SMARCD1-209ENST00000550477 RAD50Q92878 1312 aa27.13■■□□□ 1.93
SMARCD1-209ENST00000550477 NT5C2P49902 561 aa27.12■■□□□ 1.93
SMARCD1-209ENST00000550477 AKNAD1Q5T1N1 836 aa27.12■■□□□ 1.93
SMARCD1-209ENST00000550477 RASIP1Q5U651 963 aa27.12■■□□□ 1.93
SMARCD1-209ENST00000550477 RNF207Q6ZRF8 634 aa27.12■■□□□ 1.93
SMARCD1-209ENST00000550477 PBX4Q9BYU1 374 aa27.12■■□□□ 1.93
SMARCD1-209ENST00000550477 A0A0D9SFI3 127 aa27.11■■□□□ 1.93
SMARCD1-209ENST00000550477 CALML3P27482 149 aa27.11■■□□□ 1.93
SMARCD1-209ENST00000550477 CCDC178Q5BJE1 867 aa27.11■■□□□ 1.93
SMARCD1-209ENST00000550477 RASGRP2Q7LDG7 609 aa27.11■■□□□ 1.93
SMARCD1-209ENST00000550477 ESR2Q92731 530 aa27.11■■□□□ 1.93
SMARCD1-209ENST00000550477 CCDC171Q6TFL3 1326 aa27.11■■□□□ 1.93
SMARCD1-209ENST00000550477 MYO9BQ13459 2157 aa27.11■■□□□ 1.93
SMARCD1-209ENST00000550477 NKRFO15226 690 aaKnown RBP eCLIP27.1■■□□□ 1.93
SMARCD1-209ENST00000550477 PDHBP11177 359 aa27.1■■□□□ 1.93
SMARCD1-209ENST00000550477 PDE4DQ08499 809 aa27.1■■□□□ 1.93
SMARCD1-209ENST00000550477 NMIQ13287 307 aaPredicted RBP27.1■■□□□ 1.93
SMARCD1-209ENST00000550477 GPATCH4Q5T3I0 446 aaKnown RBP27.1■■□□□ 1.93
SMARCD1-209ENST00000550477 RWDD1Q9H446 243 aaPredicted RBP27.1■■□□□ 1.93
SMARCD1-209ENST00000550477 NFIBO00712 420 aa27.09■■□□□ 1.93
SMARCD1-209ENST00000550477 B4GALT4O60513 344 aa27.09■■□□□ 1.93
SMARCD1-209ENST00000550477 HAND2P61296 217 aa27.09■■□□□ 1.93
SMARCD1-209ENST00000550477 DNERQ8NFT8 737 aa27.09■■□□□ 1.93
SMARCD1-209ENST00000550477 TRPV6Q9H1D0 765 aa27.09■■□□□ 1.93
SMARCD1-209ENST00000550477 ZNF213O14771 459 aa27.08■■□□□ 1.93
SMARCD1-209ENST00000550477 KPNA6O60684 536 aa27.08■■□□□ 1.93
SMARCD1-209ENST00000550477 CCL23P55773 120 aa27.08■■□□□ 1.93
SMARCD1-209ENST00000550477 PSMC6P62333 389 aa27.08■■□□□ 1.93
SMARCD1-209ENST00000550477 ZNF543Q08ER8 600 aa27.08■■□□□ 1.93
SMARCD1-209ENST00000550477 IQCA1Q86XH1 822 aa27.08■■□□□ 1.93
SMARCD1-209ENST00000550477 OR6J1Q8NGC5 347 aa27.08■■□□□ 1.93
SMARCD1-209ENST00000550477 PURBQ96QR8 312 aaKnown RBP27.08■■□□□ 1.93
SMARCD1-209ENST00000550477 NOC4LQ9BVI4 516 aaKnown RBP27.08■■□□□ 1.93
SMARCD1-209ENST00000550477 LNPKQ9C0E8 428 aa27.08■■□□□ 1.93
SMARCD1-209ENST00000550477 SLC28A3Q9HAS3 691 aa27.08■■□□□ 1.93
SMARCD1-209ENST00000550477 DDX49Q9Y6V7 483 aaKnown RBP27.08■■□□□ 1.93
SMARCD1-209ENST00000550477 WDR19Q8NEZ3 1342 aa27.08■■□□□ 1.93
SMARCD1-209ENST00000550477 GRXCR1A8MXD5 290 aa27.07■■□□□ 1.92
SMARCD1-209ENST00000550477 PFKMP08237 780 aa27.07■■□□□ 1.92
SMARCD1-209ENST00000550477 MYL3P08590 195 aa27.07■■□□□ 1.92
SMARCD1-209ENST00000550477 PPP2R5BQ15173 497 aa27.07■■□□□ 1.92
SMARCD1-209ENST00000550477 OTOP2Q7RTS6 562 aa27.07■■□□□ 1.92
SMARCD1-209ENST00000550477 DGKHQ86XP1 1220 aa27.07■■□□□ 1.92
SMARCD1-209ENST00000550477 SCFD2Q8WU76 684 aa27.07■■□□□ 1.92
SMARCD1-209ENST00000550477 MTG1Q9BT17 334 aaPredicted RBP27.07■■□□□ 1.92
SMARCD1-209ENST00000550477 MAF1Q9H063 256 aa27.07■■□□□ 1.92
SMARCD1-209ENST00000550477 ALDH8A1Q9H2A2 487 aaPredicted RBP27.07■■□□□ 1.92
SMARCD1-209ENST00000550477 GRIN2DO15399 1336 aa27.07■■□□□ 1.92
SMARCD1-209ENST00000550477 RBM47A0AV96 593 aaKnown RBP27.06■■□□□ 1.92
SMARCD1-209ENST00000550477 PBX2P40425 430 aa27.06■■□□□ 1.92
SMARCD1-209ENST00000550477 ZNF589Q86UQ0 364 aaPredicted RBP27.06■■□□□ 1.92
SMARCD1-209ENST00000550477 SLC4A7Q9Y6M7 1214 aa27.06■■□□□ 1.92
SMARCD1-209ENST00000550477 UNC80Q8N2C7 3258 aa27.05■■□□□ 1.92
SMARCD1-209ENST00000550477 RPS6P62753 249 aaKnown RBP27.05■■□□□ 1.92
SMARCD1-209ENST00000550477 CLEC4DQ8WXI8 215 aa27.05■■□□□ 1.92
SMARCD1-209ENST00000550477 ZBBXA8MT70 800 aa27.04■■□□□ 1.92
SMARCD1-209ENST00000550477 SDSP20132 328 aa27.04■■□□□ 1.92
SMARCD1-209ENST00000550477 PURAQ00577 322 aaKnown RBP27.04■■□□□ 1.92
SMARCD1-209ENST00000550477 SLC30A10Q6XR72 485 aa27.04■■□□□ 1.92
SMARCD1-209ENST00000550477 RGS22Q8NE09 1264 aa27.04■■□□□ 1.92
SMARCD1-209ENST00000550477 PRDM12Q9H4Q4 367 aa27.04■■□□□ 1.92
SMARCD1-209ENST00000550477 LRRC37A2A6NM11 1700 aa27.04■■□□□ 1.92
SMARCD1-209ENST00000550477 HIP1O00291 1037 aa27.03■■□□□ 1.92
SMARCD1-209ENST00000550477 TNKSO95271 1327 aa27.03■■□□□ 1.92
SMARCD1-209ENST00000550477 SNHG28P0DPA3 235 aa27.03■■□□□ 1.92
SMARCD1-209ENST00000550477 ACTN1P12814 892 aa27.03■■□□□ 1.92
SMARCD1-209ENST00000550477 PTGS1P23219 599 aa27.03■■□□□ 1.92
SMARCD1-209ENST00000550477 TTLL4Q14679 1199 aa27.03■■□□□ 1.92
SMARCD1-209ENST00000550477 UMODL1Q5DID0 1318 aa27.03■■□□□ 1.92
SMARCD1-209ENST00000550477 FAM47CQ5HY64 1035 aa27.03■■□□□ 1.92
SMARCD1-209ENST00000550477 TJAP1Q5JTD0 557 aa27.03■■□□□ 1.92
SMARCD1-209ENST00000550477 TMEM63BQ5T3F8 832 aa27.03■■□□□ 1.92
SMARCD1-209ENST00000550477 KAT14Q9H8E8 782 aa27.03■■□□□ 1.92
SMARCD1-209ENST00000550477 CXXC1Q9P0U4 656 aaPredicted RBP27.03■■□□□ 1.92
SMARCD1-209ENST00000550477 TXNP10599 105 aaKnown RBP27.02■■□□□ 1.92
SMARCD1-209ENST00000550477 B4GALNT3Q6L9W6 998 aa27.02■■□□□ 1.92
SMARCD1-209ENST00000550477 RETREG2Q8NC44 543 aa27.02■■□□□ 1.92
SMARCD1-209ENST00000550477 PPM1EQ8WY54 764 aa27.02■■□□□ 1.92
SMARCD1-209ENST00000550477 DIAPH3Q9NSV4 1193 aa27.02■■□□□ 1.92
SMARCD1-209ENST00000550477 LCTP09848 1927 aa27.01■■□□□ 1.91
SMARCD1-209ENST00000550477 IGFBP4P22692 258 aa27.01■■□□□ 1.91
SMARCD1-209ENST00000550477 USH1GQ495M9 461 aa27.01■■□□□ 1.91
SMARCD1-209ENST00000550477 NFRKBQ6P4R8 1299 aa27.01■■□□□ 1.91
SMARCD1-209ENST00000550477 MCF2L2Q86YR7 1114 aa27.01■■□□□ 1.91
SMARCD1-209ENST00000550477 WNT8AQ9H1J5 351 aa27.01■■□□□ 1.91
SMARCD1-209ENST00000550477 NKX2-4Q9H2Z4 354 aa27.01■■□□□ 1.91
SMARCD1-209ENST00000550477 TRMT13Q9NUP7 481 aaKnown RBP27.01■■□□□ 1.91
SMARCD1-209ENST00000550477 NOD1Q9Y239 953 aa27.01■■□□□ 1.91
SMARCD1-209ENST00000550477 EDNRBP24530 442 aa27■■□□□ 1.91
SMARCD1-209ENST00000550477 PTPN11Q06124 597 aaPredicted RBP27■■□□□ 1.91
SMARCD1-209ENST00000550477 TBC1D10CQ8IV04 446 aa27■■□□□ 1.91
SMARCD1-209ENST00000550477 PNMA1Q8ND90 353 aa27■■□□□ 1.91
SMARCD1-209ENST00000550477 SCLYQ96I15 445 aa27■■□□□ 1.91
SMARCD1-209ENST00000550477 ZKSCAN3Q9BRR0 538 aa27■■□□□ 1.91
SMARCD1-209ENST00000550477 TSPYL2Q9H2G4 693 aaPredicted RBP27■■□□□ 1.91
SMARCD1-209ENST00000550477 CTNNA3Q9UI47 895 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms