RNA–Protein interactions for RNA: ENST00000549993.1

AC138331.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC138331.1, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138331.1-201ENST00000549993 TCEAL5Q5H9L2 206 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 SLC9C2Q5TAH2 1124 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 CNKSR3Q6P9H4 555 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 LCORLQ8N3X6 602 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 MORC4Q8TE76 937 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 AFAP1L1Q8TED9 768 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 ARHGAP45Q92619 1136 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 POP1Q99575 1024 aaKnown RBP11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 C17orf80Q9BSJ5 609 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 CCDC8Q9H0W5 538 aaPredicted RBP11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 ACAD9Q9H845 621 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 VTA1Q9NP79 307 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 ATP8A2Q9NTI2 1148 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 FAM86C1Q9NVL1 165 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 NYAP2Q9P242 653 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 CTDP1Q9Y5B0 961 aaPredicted RBP11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 DDX49Q9Y6V7 483 aaKnown RBP11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 FAM186AA6NE01 2351 aa11.29□□□□□ -0.6
AC138331.1-201ENST00000549993 CDK5RAP2Q96SN8 1893 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 TCRBV5S4A2TA0A5A2 114 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 EFCAB14O75071 495 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 PARNO95453 639 aaKnown RBP11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 CPT1AP50416 773 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 TCTN1Q2MV58 587 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 KIAA1211Q6ZU35 1233 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 SUGP1Q8IWZ8 645 aaKnown RBP11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 FBXO16Q8IX29 292 aaPredicted RBP11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 FBXL6Q8N531 539 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 CAGE1Q8TC20 777 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 SSH3Q8TE77 659 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 KIFC2Q96AC6 838 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 CTAGE1Q96RT6 745 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 FEM1BQ9UK73 627 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 COG6Q9Y2V7 657 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 INSL6Q9Y581 213 aa11.28□□□□□ -0.6
AC138331.1-201ENST00000549993 CYP2D7A0A087X1C5 515 aa11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 RBM47A0AV96 593 aaKnown RBP11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 H3BNC9 293 aa11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 PRKAB2O43741 272 aa11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 KPNA6O60684 536 aa11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 MYL3P08590 195 aa11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 FDX1P10109 184 aa11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 SELPP16109 830 aa11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 HTRA4P83105 476 aaPredicted RBP11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 EPC2Q52LR7 807 aa11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 FAM47CQ5HY64 1035 aa11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 EEPD1Q7L9B9 569 aa11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 ATOH1Q92858 354 aaPredicted RBP11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 GPHNQ9NQX3 736 aaPredicted RBP11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 HOMER2Q9NSB8 354 aa11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 NOP58Q9Y2X3 529 aaKnown RBP11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 ZNF532Q9HCE3 1301 aa11.27□□□□□ -0.61
AC138331.1-201ENST00000549993 A6NJR5 290 aa11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 MBTPS2O43462 519 aa11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 NBNO60934 754 aa11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 SURF6O75683 361 aaKnown RBP11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 CT47B1P0C2W7 299 aaPredicted RBP11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 ZXDAP98168 799 aa11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 RBL2Q08999 1139 aa11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 OS9Q13438 667 aaPredicted RBP11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 TTF1Q15361 905 aaPredicted RBP11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 TKFCQ3LXA3 575 aa11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 ASCL5Q7RTU5 278 aa11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 CCDC155Q8N6L0 562 aa11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 MKL1Q969V6 931 aa11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 SAMD11Q96NU1 681 aa11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 WDR11Q9BZH6 1224 aa11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 NSUN3Q9H649 340 aaKnown RBP11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 ARMT1Q9H993 441 aa11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 CLDND1Q9NY35 253 aa11.26□□□□□ -0.61
AC138331.1-201ENST00000549993 DMXL1Q9Y485 3027 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 MYH1P12882 1939 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 TPRP12270 2363 aaKnown RBP11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 AVPR2P30518 371 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 NUBP1P53384 320 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 ATP8B2P98198 1209 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 DLX2Q07687 328 aaPredicted RBP11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 IKBKEQ14164 716 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 PTGISQ16647 500 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 BRDTQ58F21 947 aaPredicted RBP11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 EP400NLQ6ZTU2 488 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 LRRC8DQ7L1W4 858 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 RPAP2Q8IXW5 612 aaPredicted RBP11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 TRMT2AQ8IZ69 625 aaKnown RBP11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 PPP1R13LQ8WUF5 828 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 DHX38Q92620 1227 aaKnown RBP11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 CRBNQ96SW2 442 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 RNF146Q9NTX7 359 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 CYP39A1Q9NYL5 469 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 SYNPO2Q9UMS6 1093 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 NOD1Q9Y239 953 aa11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 KMT2BQ9UMN6 2715 aaPredicted RBP11.25□□□□□ -0.61
AC138331.1-201ENST00000549993 CHD6Q8TD26 2715 aa11.24□□□□□ -0.61
AC138331.1-201ENST00000549993 IGKV6D-41A0A0C4DH26 115 aa11.24□□□□□ -0.61
AC138331.1-201ENST00000549993 STXBP3O00186 592 aa11.24□□□□□ -0.61
AC138331.1-201ENST00000549993 ID4P47928 161 aa11.24□□□□□ -0.61
AC138331.1-201ENST00000549993 SMAD4Q13485 552 aaKnown RBP11.24□□□□□ -0.61
AC138331.1-201ENST00000549993 GPM6BQ13491 265 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms