RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 MROH7Q68CQ1 1323 aa15.74■□□□□ 0.11
GCN1-206ENST00000549815 PTPDC1A2A3K4 754 aa15.74■□□□□ 0.11
GCN1-206ENST00000549815 DYNC1LI2O43237 492 aaPredicted RBP15.74■□□□□ 0.11
GCN1-206ENST00000549815 EDNRBP24530 442 aa15.74■□□□□ 0.11
GCN1-206ENST00000549815 IRX6P78412 446 aaPredicted RBP15.74■□□□□ 0.11
GCN1-206ENST00000549815 CXCL17Q6UXB2 119 aa15.74■□□□□ 0.11
GCN1-206ENST00000549815 KRT23Q9C075 422 aa15.74■□□□□ 0.11
GCN1-206ENST00000549815 KAT14Q9H8E8 782 aa15.74■□□□□ 0.11
GCN1-206ENST00000549815 GRIN2DO15399 1336 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 TIMP1P01033 207 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 CD4P01730 458 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 CHMLP26374 656 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 CALML3P27482 149 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 FPGSQ05932 587 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 SEC23AQ15436 765 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 CDC37Q16543 378 aaPredicted RBP15.73■□□□□ 0.11
GCN1-206ENST00000549815 FSCN1Q16658 493 aaKnown RBP15.73■□□□□ 0.11
GCN1-206ENST00000549815 DUSP28Q4G0W2 176 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 KIAA1211Q6ZU35 1233 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 NOL8Q76FK4 1167 aaKnown RBP15.73■□□□□ 0.11
GCN1-206ENST00000549815 CYB5R4Q7L1T6 521 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 ADGRF4Q8IZF3 695 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 RGS22Q8NE09 1264 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 CNNM2Q9H8M5 875 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 STXBP5LQ9Y2K9 1186 aa15.73■□□□□ 0.11
GCN1-206ENST00000549815 CABYRO75952 493 aa15.72■□□□□ 0.11
GCN1-206ENST00000549815 PTH1RQ03431 593 aa15.72■□□□□ 0.11
GCN1-206ENST00000549815 USH1GQ495M9 461 aa15.72■□□□□ 0.11
GCN1-206ENST00000549815 ASPRV1Q53RT3 343 aa15.72■□□□□ 0.11
GCN1-206ENST00000549815 MFSD5Q6N075 450 aa15.72■□□□□ 0.11
GCN1-206ENST00000549815 DNERQ8NFT8 737 aa15.72■□□□□ 0.11
GCN1-206ENST00000549815 TBC1D5Q92609 795 aa15.72■□□□□ 0.11
GCN1-206ENST00000549815 VTI1AQ96AJ9 217 aa15.72■□□□□ 0.11
GCN1-206ENST00000549815 GUCD1Q96NT3 240 aa15.72■□□□□ 0.11
GCN1-206ENST00000549815 MAF1Q9H063 256 aa15.72■□□□□ 0.11
GCN1-206ENST00000549815 AP5M1Q9H0R1 490 aa15.72■□□□□ 0.11
GCN1-206ENST00000549815 MYH6P13533 1939 aa15.72■□□□□ 0.11
GCN1-206ENST00000549815 CYP21A2P08686 494 aa15.71■□□□□ 0.11
GCN1-206ENST00000549815 SMAD3P84022 425 aaKnown RBP15.71■□□□□ 0.11
GCN1-206ENST00000549815 ITGA7Q13683 1181 aa15.71■□□□□ 0.11
GCN1-206ENST00000549815 C16orf59Q7L2K0 433 aa15.71■□□□□ 0.11
GCN1-206ENST00000549815 WDR11Q9BZH6 1224 aa15.71■□□□□ 0.11
GCN1-206ENST00000549815 JMJD4Q9H9V9 463 aa15.71■□□□□ 0.11
GCN1-206ENST00000549815 ABCB11O95342 1321 aa15.7■□□□□ 0.1
GCN1-206ENST00000549815 ZEB2O60315 1214 aa15.7■□□□□ 0.1
GCN1-206ENST00000549815 PARP1P09874 1014 aaKnown RBP15.7■□□□□ 0.1
GCN1-206ENST00000549815 QRICH1Q2TAL8 776 aa15.7■□□□□ 0.1
GCN1-206ENST00000549815 IFIT1BQ5T764 474 aaKnown RBP15.7■□□□□ 0.1
GCN1-206ENST00000549815 STAG2Q8N3U4 1231 aa15.7■□□□□ 0.1
GCN1-206ENST00000549815 COL20A1Q9P218 1284 aa15.7■□□□□ 0.1
GCN1-206ENST00000549815 TAF6LQ9Y6J9 622 aa15.7■□□□□ 0.1
GCN1-206ENST00000549815 EYSQ5T1H1 3165 aa15.69■□□□□ 0.1
GCN1-206ENST00000549815 TLR3O15455 904 aaKnown RBP15.69■□□□□ 0.1
GCN1-206ENST00000549815 SGSM2O43147 1006 aa15.69■□□□□ 0.1
GCN1-206ENST00000549815 SYTL5Q8TDW5 730 aaPredicted RBP15.69■□□□□ 0.1
GCN1-206ENST00000549815 RUFY2Q8WXA3 655 aa15.69■□□□□ 0.1
GCN1-206ENST00000549815 MTMR8Q96EF0 704 aa15.69■□□□□ 0.1
GCN1-206ENST00000549815 RNPC3Q96LT9 517 aaKnown RBP15.69■□□□□ 0.1
GCN1-206ENST00000549815 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.69■□□□□ 0.1
GCN1-206ENST00000549815 UBAC1Q9BSL1 405 aa15.69■□□□□ 0.1
GCN1-206ENST00000549815 SEZ6LQ9BYH1 1024 aa15.69■□□□□ 0.1
GCN1-206ENST00000549815 MAD2L2Q9UI95 211 aa15.69■□□□□ 0.1
GCN1-206ENST00000549815 SCN10AQ9Y5Y9 1956 aa15.69■□□□□ 0.1
GCN1-206ENST00000549815 UNC80Q8N2C7 3258 aa15.68■□□□□ 0.1
GCN1-206ENST00000549815 ARIH2O95376 493 aa15.68■□□□□ 0.1
GCN1-206ENST00000549815 PSMC6P62333 389 aa15.68■□□□□ 0.1
GCN1-206ENST00000549815 PURAQ00577 322 aaKnown RBP15.68■□□□□ 0.1
GCN1-206ENST00000549815 GHRHRQ02643 423 aa15.68■□□□□ 0.1
GCN1-206ENST00000549815 PDE4DQ08499 809 aa15.68■□□□□ 0.1
GCN1-206ENST00000549815 PPIGQ13427 754 aaKnown RBP eCLIP15.68■□□□□ 0.12e-13■□□□□ 10.9
GCN1-206ENST00000549815 SLC35G1Q2M3R5 365 aa15.68■□□□□ 0.1
GCN1-206ENST00000549815 ZNF697Q5TEC3 545 aa15.68■□□□□ 0.1
GCN1-206ENST00000549815 RASIP1Q5U651 963 aa15.68■□□□□ 0.1
GCN1-206ENST00000549815 STOX1Q6ZVD7 989 aa15.68■□□□□ 0.1
GCN1-206ENST00000549815 FAM161BQ96MY7 647 aa15.68■□□□□ 0.1
GCN1-206ENST00000549815 TAAR1Q96RJ0 339 aa15.68■□□□□ 0.1
GCN1-206ENST00000549815 PPP1R12CQ9BZL4 782 aa15.68■□□□□ 0.1
GCN1-206ENST00000549815 TTYH1Q9H313 450 aaPredicted RBP15.68■□□□□ 0.1
GCN1-206ENST00000549815 A0A0C4DFX4 3053 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 KIAA1217Q5T5P2 1943 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 PALM3A6NDB9 673 aaPredicted RBP15.67■□□□□ 0.1
GCN1-206ENST00000549815 OPLAHO14841 1288 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 NKRFO15226 690 aaKnown RBP eCLIP15.67■□□□□ 0.1
GCN1-206ENST00000549815 B4GALT4O60513 344 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 PPP1R11O60927 126 aaPredicted RBP15.67■□□□□ 0.1
GCN1-206ENST00000549815 CSF2RAP15509 400 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 TMEM240Q5SV17 173 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 CCDC62Q6P9F0 684 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 FBXO11Q86XK2 927 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 OR6J1Q8NGC5 347 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 SCFD2Q8WU76 684 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 COPS5Q92905 334 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 MPHOSPH6Q99547 160 aaKnown RBP15.67■□□□□ 0.1
GCN1-206ENST00000549815 SEMA6BQ9H3T3 888 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 SENP2Q9HC62 589 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 VAT1LQ9HCJ6 419 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 POLR3EQ9NVU0 708 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 U3KPZ7 1027 aaPredicted RBP15.67■□□□□ 0.1
GCN1-206ENST00000549815 UMODL1Q5DID0 1318 aa15.67■□□□□ 0.1
GCN1-206ENST00000549815 A6NJR5 290 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms