RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 FXR2P51116 673 aaKnown RBP eCLIP21.59■■□□□ 1.05
BRF1-215ENST00000549655 LRMPQ12912 555 aa21.59■■□□□ 1.05
BRF1-215ENST00000549655 TNFAIP1Q13829 316 aa21.59■■□□□ 1.05
BRF1-215ENST00000549655 FAM83BQ5T0W9 1011 aa21.59■■□□□ 1.05
BRF1-215ENST00000549655 FILIP1Q7Z7B0 1213 aa21.59■■□□□ 1.05
BRF1-215ENST00000549655 SMYD4Q8IYR2 804 aaPredicted RBP21.59■■□□□ 1.05
BRF1-215ENST00000549655 DDX25Q9UHL0 483 aaKnown RBP21.59■■□□□ 1.05
BRF1-215ENST00000549655 GJA3Q9Y6H8 435 aa21.59■■□□□ 1.05
BRF1-215ENST00000549655 MEIS2O14770 477 aa21.58■■□□□ 1.05
BRF1-215ENST00000549655 RPN1P04843 607 aaKnown RBP21.58■■□□□ 1.05
BRF1-215ENST00000549655 GCFC2P16383 781 aaKnown RBP21.58■■□□□ 1.05
BRF1-215ENST00000549655 TMEM266Q2M3C6 531 aa21.58■■□□□ 1.05
BRF1-215ENST00000549655 NLGN2Q8NFZ4 835 aa21.58■■□□□ 1.05
BRF1-215ENST00000549655 LRRC15Q8TF66 581 aa21.58■■□□□ 1.05
BRF1-215ENST00000549655 CACTINQ8WUQ7 758 aaKnown RBP21.58■■□□□ 1.05
BRF1-215ENST00000549655 DPF2Q92785 391 aa21.58■■□□□ 1.05
BRF1-215ENST00000549655 MMTAG2Q9BU76 263 aaKnown RBP21.58■■□□□ 1.05
BRF1-215ENST00000549655 CUEDC2Q9H467 287 aa21.58■■□□□ 1.05
BRF1-215ENST00000549655 KBTBD4Q9NVX7 518 aa21.58■■□□□ 1.05
BRF1-215ENST00000549655 PPP1R3GB7ZBB8 358 aa21.57■■□□□ 1.04
BRF1-215ENST00000549655 UBASH3AP57075 661 aa21.57■■□□□ 1.04
BRF1-215ENST00000549655 KLHL10Q6JEL2 608 aa21.57■■□□□ 1.04
BRF1-215ENST00000549655 SAMD7Q7Z3H4 446 aa21.57■■□□□ 1.04
BRF1-215ENST00000549655 C17orf53Q8N3J3 647 aaPredicted RBP21.57■■□□□ 1.04
BRF1-215ENST00000549655 KIAA1524Q8TCG1 905 aa21.57■■□□□ 1.04
BRF1-215ENST00000549655 ANO3Q9BYT9 981 aa21.57■■□□□ 1.04
BRF1-215ENST00000549655 VCPKMTQ9H867 229 aa21.57■■□□□ 1.04
BRF1-215ENST00000549655 RMND1Q9NWS8 449 aa21.57■■□□□ 1.04
BRF1-215ENST00000549655 CNOT7Q9UIV1 285 aaKnown RBP21.57■■□□□ 1.04
BRF1-215ENST00000549655 ASNSP08243 561 aa21.57■■□□□ 1.04
BRF1-215ENST00000549655 AP3B2Q13367 1082 aa21.57■■□□□ 1.04
BRF1-215ENST00000549655 ZYXQ15942 572 aaKnown RBP21.57■■□□□ 1.04
BRF1-215ENST00000549655 TEPSINQ96N21 525 aa21.57■■□□□ 1.04
BRF1-215ENST00000549655 NAP1L4Q99733 375 aaKnown RBP21.57■■□□□ 1.04
BRF1-215ENST00000549655 SH2D4AQ9H788 454 aa21.57■■□□□ 1.04
BRF1-215ENST00000549655 LRWD1Q9UFC0 647 aa21.57■■□□□ 1.04
BRF1-215ENST00000549655 PHF20L1A8MW92 1017 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 CBFA2T2O43439 604 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 MYL1P05976 194 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 ZNF18P17022 549 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 HSP90AA4PQ58FG1 418 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 RAB34Q9BZG1 259 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 MAGEF1Q9HAY2 307 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 IMPACTQ9P2X3 320 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 TAL1P17542 331 aaPredicted RBP21.56■■□□□ 1.04
BRF1-215ENST00000549655 USP11P51784 963 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 PDIA5Q14554 519 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 ARID5BQ14865 1188 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 NOLC1Q14978 699 aaKnown RBP eCLIP21.56■■□□□ 1.04
BRF1-215ENST00000549655 TBC1D10BQ4KMP7 808 aaPredicted RBP21.56■■□□□ 1.04
BRF1-215ENST00000549655 LRRC8AQ8IWT6 810 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 HAS1Q92839 578 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 CALML4Q96GE6 196 aa21.56■■□□□ 1.04
BRF1-215ENST00000549655 GLIS2Q9BZE0 524 aaPredicted RBP21.56■■□□□ 1.04
BRF1-215ENST00000549655 ASTN2O75129 1339 aaPredicted RBP21.55■■□□□ 1.04
BRF1-215ENST00000549655 SYNRGQ9UMZ2 1314 aa21.55■■□□□ 1.04
BRF1-215ENST00000549655 OFD1O75665 1012 aa21.55■■□□□ 1.04
BRF1-215ENST00000549655 STX17P56962 302 aa21.55■■□□□ 1.04
BRF1-215ENST00000549655 ZNF658Q5TYW1 1059 aaPredicted RBP21.55■■□□□ 1.04
BRF1-215ENST00000549655 SPATA1Q5VX52 437 aa21.55■■□□□ 1.04
BRF1-215ENST00000549655 MCTP2Q6DN12 878 aa21.55■■□□□ 1.04
BRF1-215ENST00000549655 TMC6Q7Z403 805 aa21.55■■□□□ 1.04
BRF1-215ENST00000549655 CCDC84Q86UT8 332 aaPredicted RBP21.55■■□□□ 1.04
BRF1-215ENST00000549655 CDK11BP21127 795 aaKnown RBP21.54■■□□□ 1.04
BRF1-215ENST00000549655 CHURC1Q8WUH1 139 aa21.54■■□□□ 1.04
BRF1-215ENST00000549655 UPF1Q92900 1129 aaKnown RBP eCLIP21.54■■□□□ 1.04
BRF1-215ENST00000549655 NAP1L5Q96NT1 182 aaPredicted RBP21.54■■□□□ 1.04
BRF1-215ENST00000549655 P2RX7Q99572 595 aaKnown RBP21.54■■□□□ 1.04
BRF1-215ENST00000549655 SAMSN1Q9NSI8 373 aaKnown RBP21.54■■□□□ 1.04
BRF1-215ENST00000549655 POTEMA6NI47 508 aa21.54■■□□□ 1.04
BRF1-215ENST00000549655 OPLAHO14841 1288 aa21.54■■□□□ 1.04
BRF1-215ENST00000549655 GSDMDP57764 484 aa21.54■■□□□ 1.04
BRF1-215ENST00000549655 KIFC2Q96AC6 838 aa21.54■■□□□ 1.04
BRF1-215ENST00000549655 HACL1Q9UJ83 578 aa21.54■■□□□ 1.04
BRF1-215ENST00000549655 ZNF541Q9H0D2 1346 aa21.53■■□□□ 1.04
BRF1-215ENST00000549655 MARCH6O60337 910 aa21.53■■□□□ 1.04
BRF1-215ENST00000549655 KIF4BQ2VIQ3 1234 aa21.53■■□□□ 1.04
BRF1-215ENST00000549655 SPTLC3Q9NUV7 552 aa21.53■■□□□ 1.04
BRF1-215ENST00000549655 CTNND2Q9UQB3 1225 aa21.53■■□□□ 1.04
BRF1-215ENST00000549655 CYP3A7-CYP3A51PA0A087WV96 503 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 SPDYE3A6NKU9 549 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 KLRC4O43908 158 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 PLA2G6O60733 806 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 FOSP01100 380 aaPredicted RBP21.52■■□□□ 1.04
BRF1-215ENST00000549655 CYP3A7P24462 503 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 ARHGAP4P98171 946 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 TRAF1Q13077 416 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 GRB10Q13322 594 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 KCNB1Q14721 858 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 KMT5BQ4FZB7 885 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.52■■□□□ 1.04
BRF1-215ENST00000549655 CRYGNQ8WXF5 182 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 GJA10Q969M2 543 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 ZNF341Q9BYN7 854 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 GDAQ9Y2T3 454 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 SMCHD1A6NHR9 2005 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 ATAD5Q96QE3 1844 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 FAM160B2Q86V87 743 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 FEZ1Q99689 392 aa21.52■■□□□ 1.04
BRF1-215ENST00000549655 DEFB129Q9H1M3 183 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms