RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 NUP62CLQ9H1M0 184 aa13.73□□□□□ -0.21
PTPRR-209ENST00000549308 HOXC10Q9NYD6 342 aa13.73□□□□□ -0.21
PTPRR-209ENST00000549308 FAM13BQ9NYF5 915 aa13.73□□□□□ -0.21
PTPRR-209ENST00000549308 PIK3CDO00329 1044 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 NEMFO60524 1076 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 LETM1O95202 739 aaPredicted RBP13.72□□□□□ -0.21
PTPRR-209ENST00000549308 NDUFA8P51970 172 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 FCHSD1Q86WN1 690 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 MCF2L2Q86YR7 1114 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 ZNF579Q8NAF0 562 aaKnown RBP13.72□□□□□ -0.21
PTPRR-209ENST00000549308 TBC1D5Q92609 795 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 WNK4Q96J92 1243 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 CSRNP2Q9H175 543 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 CLSTN2Q9H4D0 955 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 EHMT1Q9H9B1 1298 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 RLFQ13129 1914 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 UTRNP46939 3433 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 VWA3AA6NCI4 1184 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 SPDYE16A6NNV3 312 aaPredicted RBP13.72□□□□□ -0.21
PTPRR-209ENST00000549308 LAD1O00515 517 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 KINO60870 393 aaKnown RBP13.72□□□□□ -0.21
PTPRR-209ENST00000549308 GJA5P36382 358 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 IRX3P78415 501 aaPredicted RBP13.72□□□□□ -0.21
PTPRR-209ENST00000549308 SNAPC2Q13487 334 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 GSE1Q14687 1217 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 SPECC1Q5M775 1068 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 ARL6IP4Q66PJ3 421 aaKnown RBP13.72□□□□□ -0.21
PTPRR-209ENST00000549308 FASTKD5Q7L8L6 764 aaKnown RBP13.72□□□□□ -0.21
PTPRR-209ENST00000549308 C4orf32Q8N8J7 132 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 REPS2Q8NFH8 660 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 ENGASEQ8NFI3 743 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 TMEM60Q9H2L4 133 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 TNMDQ9H2S6 317 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 HOMER2Q9NSB8 354 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 ADAMTS5Q9UNA0 930 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 AGTPBP1Q9UPW5 1226 aa13.72□□□□□ -0.21
PTPRR-209ENST00000549308 COL11A1P12107 1806 aaPredicted RBP13.71□□□□□ -0.21
PTPRR-209ENST00000549308 SMCHD1A6NHR9 2005 aa13.71□□□□□ -0.21
PTPRR-209ENST00000549308 SYCE3A1L190 88 aa13.71□□□□□ -0.22
PTPRR-209ENST00000549308 TDP2O95551 362 aa13.71□□□□□ -0.22
PTPRR-209ENST00000549308 OR52Z1P0C646 297 aa13.71□□□□□ -0.22
PTPRR-209ENST00000549308 GCFC2P16383 781 aaKnown RBP13.71□□□□□ -0.22
PTPRR-209ENST00000549308 SYKP43405 635 aa13.71□□□□□ -0.22
PTPRR-209ENST00000549308 USP11P51784 963 aa13.71□□□□□ -0.22
PTPRR-209ENST00000549308 OAZ1P54368 228 aa13.71□□□□□ -0.22
PTPRR-209ENST00000549308 PABPC4Q13310 644 aaKnown RBP eCLIP13.71□□□□□ -0.22
PTPRR-209ENST00000549308 MUM1L1Q5H9M0 696 aa13.71□□□□□ -0.22
PTPRR-209ENST00000549308 SNRNP48Q6IEG0 339 aaKnown RBP13.71□□□□□ -0.22
PTPRR-209ENST00000549308 DTHD1Q6ZMT9 781 aa13.71□□□□□ -0.22
PTPRR-209ENST00000549308 FMR1NBQ8N0W7 255 aaPredicted RBP13.71□□□□□ -0.22
PTPRR-209ENST00000549308 CLEC4DQ8WXI8 215 aa13.71□□□□□ -0.22
PTPRR-209ENST00000549308 TRERF1Q96PN7 1200 aa13.71□□□□□ -0.22
PTPRR-209ENST00000549308 P2RX7Q99572 595 aaKnown RBP13.71□□□□□ -0.22
PTPRR-209ENST00000549308 MYH7BA7E2Y1 1941 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 RBBP6Q7Z6E9 1792 aaKnown RBP13.7□□□□□ -0.22
PTPRR-209ENST00000549308 NFIBO00712 420 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 OSBPP22059 807 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 HOXA7P31268 230 aaPredicted RBP13.7□□□□□ -0.22
PTPRR-209ENST00000549308 PRPHP41219 470 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 ZNF445P59923 1031 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 ARHGAP4P98171 946 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 SNW1Q13573 536 aaKnown RBP13.7□□□□□ -0.22
PTPRR-209ENST00000549308 PLS1Q14651 629 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 TMEM132BQ14DG7 1078 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 CAMK4Q16566 473 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 CALCRLQ16602 461 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 PPP4R3AQ6IN85 833 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 RNF146Q9NTX7 359 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 DDX25Q9UHL0 483 aaKnown RBP13.7□□□□□ -0.22
PTPRR-209ENST00000549308 HPSEQ9Y251 543 aa13.7□□□□□ -0.22
PTPRR-209ENST00000549308 FAM237AA0A1B0GTK4 181 aa13.69□□□□□ -0.22
PTPRR-209ENST00000549308 ATP2A1O14983 1001 aa13.69□□□□□ -0.22
PTPRR-209ENST00000549308 EDIL3O43854 480 aa13.69□□□□□ -0.22
PTPRR-209ENST00000549308 MARCH6O60337 910 aa13.69□□□□□ -0.22
PTPRR-209ENST00000549308 ZNF202O95125 648 aa13.69□□□□□ -0.22
PTPRR-209ENST00000549308 ITGBL1O95965 494 aaPredicted RBP13.69□□□□□ -0.22
PTPRR-209ENST00000549308 LONP1P36776 959 aaKnown RBP13.69□□□□□ -0.22
PTPRR-209ENST00000549308 SREBF1P36956 1147 aa13.69□□□□□ -0.22
PTPRR-209ENST00000549308 HSD17B4P51659 736 aa13.69□□□□□ -0.22
PTPRR-209ENST00000549308 TKFCQ3LXA3 575 aa13.69□□□□□ -0.22
PTPRR-209ENST00000549308 SAMD3Q8N6K7 520 aa13.69□□□□□ -0.22
PTPRR-209ENST00000549308 TEX13BQ9BXU2 312 aa13.69□□□□□ -0.22
PTPRR-209ENST00000549308 ASCC2Q9H1I8 757 aaPredicted RBP13.69□□□□□ -0.22
PTPRR-209ENST00000549308 KCNH3Q9ULD8 1083 aa13.69□□□□□ -0.22
PTPRR-209ENST00000549308 TRPM7Q96QT4 1865 aa13.69□□□□□ -0.22
PTPRR-209ENST00000549308 SLC37A4O43826 429 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 ZNF76P36508 570 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 STAT3P40763 770 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 GTF2A2P52657 109 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 MKRN3Q13064 507 aaKnown RBP13.68□□□□□ -0.22
PTPRR-209ENST00000549308 MOGSQ13724 837 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 IL17AQ16552 155 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 MOXD1Q6UVY6 613 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 NSMFQ6X4W1 530 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 MB21D1Q8N884 522 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 GPBP1L1Q9HC44 474 aaPredicted RBP13.68□□□□□ -0.22
PTPRR-209ENST00000549308 ZNF214Q9UL59 606 aaPredicted RBP13.68□□□□□ -0.22
PTPRR-209ENST00000549308 RIPK3Q9Y572 518 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 CTAGE5O15320 804 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms