RNA–Protein interactions for RNA: ENST00000549047.5

ARFGAP1-221, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-221ENST00000549047 STAG2Q8N3U4 1231 aa17.72■□□□□ 0.43
ARFGAP1-221ENST00000549047 RGS22Q8NE09 1264 aa17.72■□□□□ 0.43
ARFGAP1-221ENST00000549047 NCOA7Q8NI08 942 aa17.72■□□□□ 0.43
ARFGAP1-221ENST00000549047 TRIM43Q96BQ3 446 aaPredicted RBP17.72■□□□□ 0.43
ARFGAP1-221ENST00000549047 AP5M1Q9H0R1 490 aa17.72■□□□□ 0.43
ARFGAP1-221ENST00000549047 JMJD4Q9H9V9 463 aa17.72■□□□□ 0.43
ARFGAP1-221ENST00000549047 VAT1LQ9HCJ6 419 aa17.72■□□□□ 0.43
ARFGAP1-221ENST00000549047 ELP1O95163 1332 aa17.72■□□□□ 0.43
ARFGAP1-221ENST00000549047 ABCB11O95342 1321 aa17.72■□□□□ 0.43
ARFGAP1-221ENST00000549047 MCM3APO60318 1980 aa17.71■□□□□ 0.43
ARFGAP1-221ENST00000549047 ERICH2A1L162 156 aa17.71■□□□□ 0.43
ARFGAP1-221ENST00000549047 DYNC1LI2O43237 492 aaPredicted RBP17.71■□□□□ 0.43
ARFGAP1-221ENST00000549047 TMEM63BQ5T3F8 832 aa17.71■□□□□ 0.43
ARFGAP1-221ENST00000549047 KIAA1211Q6ZU35 1233 aa17.71■□□□□ 0.43
ARFGAP1-221ENST00000549047 BADQ92934 168 aa17.71■□□□□ 0.43
ARFGAP1-221ENST00000549047 VTI1AQ96AJ9 217 aa17.71■□□□□ 0.43
ARFGAP1-221ENST00000549047 KLRF2D3W0D1 207 aa17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 EDNRBP24530 442 aa17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 PDE4DQ08499 809 aa17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 SART3Q15020 963 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 FSCN1Q16658 493 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 CHST3Q7LGC8 479 aa17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 FBXO11Q86XK2 927 aa17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 DNERQ8NFT8 737 aa17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 TOX2Q96NM4 488 aa17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 MPHOSPH6Q99547 160 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 ESYT1Q9BSJ8 1104 aa17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 LSG1Q9H089 658 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 SENP2Q9HC62 589 aa17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 TMEM39AQ9NV64 488 aa17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 MAD2L2Q9UI95 211 aa17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 LAMA2P24043 3122 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-221ENST00000549047 A0A0U1RQG5 324 aaPredicted RBP17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 PALM3A6NDB9 673 aaPredicted RBP17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 DCDC2CA8MYV0 355 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 KIAA0355O15063 1070 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 ITGB8P26012 769 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 ANTXR2P58335 489 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 FAAP100Q0VG06 881 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 WTAPQ15007 396 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 DUSP28Q4G0W2 176 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 BMP2KLQ5H9B9 411 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 TMEM67Q5HYA8 995 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 CXCL17Q6UXB2 119 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 MB21D2Q8IYB1 491 aaPredicted RBP17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 TBC1D5Q92609 795 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 WDR11Q9BZH6 1224 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 MAF1Q9H063 256 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 MRPL11Q9Y3B7 192 aaKnown RBP17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 Q9Y3F1 56 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 LRRC37A2A6NM11 1700 aa17.69■□□□□ 0.42
ARFGAP1-221ENST00000549047 LCTP09848 1927 aa17.68■□□□□ 0.42
ARFGAP1-221ENST00000549047 RBM47A0AV96 593 aaKnown RBP17.68■□□□□ 0.42
ARFGAP1-221ENST00000549047 CDK7P50613 346 aa17.68■□□□□ 0.42
ARFGAP1-221ENST00000549047 GRM4Q14833 912 aa17.68■□□□□ 0.42
ARFGAP1-221ENST00000549047 MCF2L2Q86YR7 1114 aa17.68■□□□□ 0.42
ARFGAP1-221ENST00000549047 SYTL5Q8TDW5 730 aaPredicted RBP17.68■□□□□ 0.42
ARFGAP1-221ENST00000549047 MTMR8Q96EF0 704 aa17.68■□□□□ 0.42
ARFGAP1-221ENST00000549047 MROH7Q68CQ1 1323 aa17.68■□□□□ 0.42
ARFGAP1-221ENST00000549047 B4DLN1 442 aa17.67■□□□□ 0.42
ARFGAP1-221ENST00000549047 ARVCFO00192 962 aa17.67■□□□□ 0.42
ARFGAP1-221ENST00000549047 ZEB2O60315 1214 aa17.67■□□□□ 0.42
ARFGAP1-221ENST00000549047 CABYRO75952 493 aa17.67■□□□□ 0.42
ARFGAP1-221ENST00000549047 RAG1P15918 1043 aa17.67■□□□□ 0.42
ARFGAP1-221ENST00000549047 MRPL12P52815 198 aaKnown RBP17.67■□□□□ 0.42
ARFGAP1-221ENST00000549047 TROAPQ12815 778 aa17.67■□□□□ 0.42
ARFGAP1-221ENST00000549047 IGDCC4Q8TDY8 1250 aa17.67■□□□□ 0.42
ARFGAP1-221ENST00000549047 AMNQ9BXJ7 453 aa17.67■□□□□ 0.42
ARFGAP1-221ENST00000549047 ANO2Q9NQ90 1003 aa17.67■□□□□ 0.42
ARFGAP1-221ENST00000549047 COL20A1Q9P218 1284 aa17.67■□□□□ 0.42
ARFGAP1-221ENST00000549047 ZBTB5O15062 677 aa17.66■□□□□ 0.42
ARFGAP1-221ENST00000549047 PPP1R11O60927 126 aaPredicted RBP17.66■□□□□ 0.42
ARFGAP1-221ENST00000549047 SLC35G1Q2M3R5 365 aa17.66■□□□□ 0.42
ARFGAP1-221ENST00000549047 CATIPQ7Z7H3 387 aa17.66■□□□□ 0.42
ARFGAP1-221ENST00000549047 HOMER1Q86YM7 354 aa17.66■□□□□ 0.42
ARFGAP1-221ENST00000549047 TAAR1Q96RJ0 339 aa17.66■□□□□ 0.42
ARFGAP1-221ENST00000549047 TBX21Q9UL17 535 aa17.66■□□□□ 0.42
ARFGAP1-221ENST00000549047 LTBP2Q14767 1821 aa17.65■□□□□ 0.42
ARFGAP1-221ENST00000549047 OPLAHO14841 1288 aa17.65■□□□□ 0.42
ARFGAP1-221ENST00000549047 SLC27A2O14975 620 aa17.65■□□□□ 0.42
ARFGAP1-221ENST00000549047 PPP2R5BQ15173 497 aa17.65■□□□□ 0.42
ARFGAP1-221ENST00000549047 SHHQ15465 462 aa17.65■□□□□ 0.42
ARFGAP1-221ENST00000549047 C9orf50Q5SZB4 431 aa17.65■□□□□ 0.42
ARFGAP1-221ENST00000549047 GPR153Q6NV75 609 aa17.65■□□□□ 0.42
ARFGAP1-221ENST00000549047 FAM126BQ8IXS8 530 aa17.65■□□□□ 0.42
ARFGAP1-221ENST00000549047 NSUN6Q8TEA1 469 aaKnown RBP17.65■□□□□ 0.42
ARFGAP1-221ENST00000549047 SCFD2Q8WU76 684 aa17.65■□□□□ 0.42
ARFGAP1-221ENST00000549047 RMDN3Q96TC7 470 aa17.65■□□□□ 0.42
ARFGAP1-221ENST00000549047 LY9Q9HBG7 655 aa17.65■□□□□ 0.42
ARFGAP1-221ENST00000549047 GPHNQ9NQX3 736 aaPredicted RBP17.65■□□□□ 0.42
ARFGAP1-221ENST00000549047 PRC1O43663 620 aa17.64■□□□□ 0.41
ARFGAP1-221ENST00000549047 CYTH3O43739 400 aa17.64■□□□□ 0.41
ARFGAP1-221ENST00000549047 CFBP00751 764 aa17.64■□□□□ 0.41
ARFGAP1-221ENST00000549047 CREB3L3Q68CJ9 461 aa17.64■□□□□ 0.41
ARFGAP1-221ENST00000549047 CASC1Q6TDU7 716 aa17.64■□□□□ 0.41
ARFGAP1-221ENST00000549047 SLC43A3Q8NBI5 491 aa17.64■□□□□ 0.41
ARFGAP1-221ENST00000549047 OR6J1Q8NGC5 347 aa17.64■□□□□ 0.41
ARFGAP1-221ENST00000549047 PIGSQ96S52 555 aa17.64■□□□□ 0.41
ARFGAP1-221ENST00000549047 RIOX1Q9H6W3 641 aa17.64■□□□□ 0.41
ARFGAP1-221ENST00000549047 PCDHA1Q9Y5I3 950 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms