RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 MC3RP41968 323 aa6.97□□□□□ -1.29
CNOT2-216ENST00000548939 EIF6P56537 245 aaKnown RBP6.97□□□□□ -1.29
CNOT2-216ENST00000548939 PAK2Q13177 524 aa6.97□□□□□ -1.29
CNOT2-216ENST00000548939 TMCO4Q5TGY1 634 aa6.97□□□□□ -1.29
CNOT2-216ENST00000548939 LIPIQ6XZB0 460 aa6.97□□□□□ -1.29
CNOT2-216ENST00000548939 ADAT2Q7Z6V5 191 aaKnown RBP6.97□□□□□ -1.29
CNOT2-216ENST00000548939 ZNF654Q8IZM8 581 aa6.97□□□□□ -1.29
CNOT2-216ENST00000548939 LZTR1Q8N653 840 aa6.97□□□□□ -1.29
CNOT2-216ENST00000548939 MCMBPQ9BTE3 642 aa6.97□□□□□ -1.29
CNOT2-216ENST00000548939 KLHL25Q9H0H3 589 aa6.97□□□□□ -1.29
CNOT2-216ENST00000548939 RXFP1Q9HBX9 757 aa6.97□□□□□ -1.29
CNOT2-216ENST00000548939 VAMP4O75379 141 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 PPM1BO75688 479 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 SEPHS1P49903 392 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 HTRA3P83110 453 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 SLC7A5Q01650 507 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 PLP2Q04941 152 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 DPY19L1Q2PZI1 675 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 SAPCD2Q86UD0 394 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 SPATA32Q96LK8 384 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 FGD4Q96M96 766 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 BDH2Q9BUT1 245 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 USP40Q9NVE5 1235 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 PCDHB10Q9UN67 800 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 EFR3BQ9Y2G0 817 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 RWDD3Q9Y3V2 267 aa6.96□□□□□ -1.3
CNOT2-216ENST00000548939 PRICKLE3O43900 615 aaPredicted RBP6.95□□□□□ -1.3
CNOT2-216ENST00000548939 EPHX1P07099 455 aa6.95□□□□□ -1.3
CNOT2-216ENST00000548939 PMLP29590 882 aa6.95□□□□□ -1.3
CNOT2-216ENST00000548939 SOX9P48436 509 aa6.95□□□□□ -1.3
CNOT2-216ENST00000548939 KRTAP10-2P60368 255 aa6.95□□□□□ -1.3
CNOT2-216ENST00000548939 RTP5Q14D33 572 aa6.95□□□□□ -1.3
CNOT2-216ENST00000548939 B3GNT8Q7Z7M8 397 aa6.95□□□□□ -1.3
CNOT2-216ENST00000548939 C19orf47Q8N9M1 422 aaKnown RBP6.95□□□□□ -1.3
CNOT2-216ENST00000548939 ZNF526Q8TF50 670 aaPredicted RBP6.95□□□□□ -1.3
CNOT2-216ENST00000548939 TSPAN17Q96FV3 270 aa6.95□□□□□ -1.3
CNOT2-216ENST00000548939 SPATA25Q9BR10 227 aa6.95□□□□□ -1.3
CNOT2-216ENST00000548939 BCAS3Q9H6U6 928 aa6.95□□□□□ -1.3
CNOT2-216ENST00000548939 NUDT5Q9UKK9 219 aa6.95□□□□□ -1.3
CNOT2-216ENST00000548939 BACE2Q9Y5Z0 518 aa6.95□□□□□ -1.3
CNOT2-216ENST00000548939 A0A1W2PQH9 124 aa6.94□□□□□ -1.3
CNOT2-216ENST00000548939 SH3D21A4FU49 640 aa6.94□□□□□ -1.3
CNOT2-216ENST00000548939 C2orf71A6NGG8 1288 aa6.94□□□□□ -1.3
CNOT2-216ENST00000548939 SCAMP3O14828 347 aaKnown RBP6.94□□□□□ -1.3
CNOT2-216ENST00000548939 ADRB1P08588 477 aa6.94□□□□□ -1.3
CNOT2-216ENST00000548939 GIPRP48546 466 aa6.94□□□□□ -1.3
CNOT2-216ENST00000548939 NFKB2Q00653 900 aa6.94□□□□□ -1.3
CNOT2-216ENST00000548939 AMPD2Q01433 879 aa6.94□□□□□ -1.3
CNOT2-216ENST00000548939 NT5DC1Q5TFE4 455 aa6.94□□□□□ -1.3
CNOT2-216ENST00000548939 NETO2Q8NC67 525 aa6.94□□□□□ -1.3
CNOT2-216ENST00000548939 OR6P1Q8NGX9 317 aa6.94□□□□□ -1.3
CNOT2-216ENST00000548939 PEX11GQ96HA9 241 aa6.94□□□□□ -1.3
CNOT2-216ENST00000548939 FBLN5Q9UBX5 448 aa6.94□□□□□ -1.3
CNOT2-216ENST00000548939 CGGBP1Q9UFW8 167 aaPredicted RBP6.94□□□□□ -1.3
CNOT2-216ENST00000548939 TRIM26Q12899 539 aaPredicted RBP6.93□□□□□ -1.3
CNOT2-216ENST00000548939 ZFYVE27Q5T4F4 411 aa6.93□□□□□ -1.3
CNOT2-216ENST00000548939 CPNE8Q86YQ8 564 aa6.93□□□□□ -1.3
CNOT2-216ENST00000548939 ARHGEF39Q8N4T4 335 aa6.93□□□□□ -1.3
CNOT2-216ENST00000548939 GULP1Q9UBP9 304 aa6.93□□□□□ -1.3
CNOT2-216ENST00000548939 SUGT1Q9Y2Z0 365 aa6.93□□□□□ -1.3
CNOT2-216ENST00000548939 NPHP3-ACAD11A0A0J9YXS1 232 aa6.92□□□□□ -1.3
CNOT2-216ENST00000548939 PPP1R11O60927 126 aaPredicted RBP6.92□□□□□ -1.3
CNOT2-216ENST00000548939 PAMP19021 973 aa6.92□□□□□ -1.3
CNOT2-216ENST00000548939 DLX2Q07687 328 aaPredicted RBP6.92□□□□□ -1.3
CNOT2-216ENST00000548939 GRB10Q13322 594 aa6.92□□□□□ -1.3
CNOT2-216ENST00000548939 SLC9A5Q14940 896 aa6.92□□□□□ -1.3
CNOT2-216ENST00000548939 SPATS1Q496A3 300 aa6.92□□□□□ -1.3
CNOT2-216ENST00000548939 UBXN11Q5T124 520 aa6.92□□□□□ -1.3
CNOT2-216ENST00000548939 SMARCC2Q8TAQ2 1214 aa6.92□□□□□ -1.3
CNOT2-216ENST00000548939 USP33Q8TEY7 942 aa6.92□□□□□ -1.3
CNOT2-216ENST00000548939 KLHL6Q8WZ60 621 aa6.92□□□□□ -1.3
CNOT2-216ENST00000548939 GPRASP2Q96D09 838 aa6.92□□□□□ -1.3
CNOT2-216ENST00000548939 BORCS6Q96GS4 357 aa6.92□□□□□ -1.3
CNOT2-216ENST00000548939 RCC1LQ96I51 464 aaKnown RBP6.92□□□□□ -1.3
CNOT2-216ENST00000548939 MTA3Q9BTC8 594 aa6.92□□□□□ -1.3
CNOT2-216ENST00000548939 TRBV23OR9-2A0A075B6M9 112 aa6.91□□□□□ -1.3
CNOT2-216ENST00000548939 ZBTB7AO95365 584 aa6.91□□□□□ -1.3
CNOT2-216ENST00000548939 RECKO95980 971 aa6.91□□□□□ -1.3
CNOT2-216ENST00000548939 EFEMP1Q12805 493 aa6.91□□□□□ -1.3
CNOT2-216ENST00000548939 PPP2R5EQ16537 467 aa6.91□□□□□ -1.3
CNOT2-216ENST00000548939 GGNQ86UU5 652 aa6.91□□□□□ -1.3
CNOT2-216ENST00000548939 FERMT3Q86UX7 667 aa6.91□□□□□ -1.3
CNOT2-216ENST00000548939 CARFQ8N187 725 aa6.91□□□□□ -1.3
CNOT2-216ENST00000548939 CPA5Q8WXQ8 436 aa6.91□□□□□ -1.3
CNOT2-216ENST00000548939 NPHS1O60500 1241 aa6.9□□□□□ -1.3
CNOT2-216ENST00000548939 WWC2Q6AWC2 1192 aa6.9□□□□□ -1.3
CNOT2-216ENST00000548939 METTL16Q86W50 562 aaKnown RBP6.9□□□□□ -1.3
CNOT2-216ENST00000548939 RASGRP4Q8TDF6 673 aa6.9□□□□□ -1.3
CNOT2-216ENST00000548939 C7orf72A4D263 438 aa6.89□□□□□ -1.31
CNOT2-216ENST00000548939 VAMP1P23763 118 aa6.89□□□□□ -1.31
CNOT2-216ENST00000548939 GJA9P57773 515 aa6.89□□□□□ -1.31
CNOT2-216ENST00000548939 RBM10P98175 930 aaKnown RBP6.89□□□□□ -1.31
CNOT2-216ENST00000548939 CACNB2Q08289 660 aaPredicted RBP6.89□□□□□ -1.31
CNOT2-216ENST00000548939 KIAA1211LQ6NV74 962 aa6.89□□□□□ -1.31
CNOT2-216ENST00000548939 CPLX3Q8WVH0 158 aa6.89□□□□□ -1.31
CNOT2-216ENST00000548939 NOX5Q96PH1 765 aa6.89□□□□□ -1.31
CNOT2-216ENST00000548939 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.89□□□□□ -1.31
CNOT2-216ENST00000548939 AKT3Q9Y243 479 aa6.89□□□□□ -1.31
CNOT2-216ENST00000548939 ZBTB7CA1YPR0 619 aa6.88□□□□□ -1.31
CNOT2-216ENST00000548939 ANKRD34BA5PLL1 514 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms