RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 ANKRD35Q8N283 1001 aa19.67■□□□□ 0.74
KRT4-201ENST00000548097 CHST13Q8NET6 341 aa19.67■□□□□ 0.74
KRT4-201ENST00000548097 PCDHA6Q9UN73 950 aa19.67■□□□□ 0.74
KRT4-201ENST00000548097 PCDHA8Q9Y5H6 950 aa19.67■□□□□ 0.74
KRT4-201ENST00000548097 ESYT2A0FGR8 921 aa19.66■□□□□ 0.74
KRT4-201ENST00000548097 GNA11P29992 359 aa19.66■□□□□ 0.74
KRT4-201ENST00000548097 TRAF1Q13077 416 aa19.66■□□□□ 0.74
KRT4-201ENST00000548097 TKFCQ3LXA3 575 aa19.66■□□□□ 0.74
KRT4-201ENST00000548097 FOXD4L6Q3SYB3 417 aaPredicted RBP19.66■□□□□ 0.74
KRT4-201ENST00000548097 FOXD4L3Q6VB84 417 aaPredicted RBP19.66■□□□□ 0.74
KRT4-201ENST00000548097 GPR142Q7Z601 462 aa19.66■□□□□ 0.74
KRT4-201ENST00000548097 CYP39A1Q9NYL5 469 aa19.66■□□□□ 0.74
KRT4-201ENST00000548097 DDX49Q9Y6V7 483 aaKnown RBP19.66■□□□□ 0.74
KRT4-201ENST00000548097 GCOM1H8Y6P7 765 aaPredicted RBP19.65■□□□□ 0.74
KRT4-201ENST00000548097 M0R2N6 131 aa19.65■□□□□ 0.74
KRT4-201ENST00000548097 POLR2MP0CAP2 368 aa19.65■□□□□ 0.74
KRT4-201ENST00000548097 MRPL12P52815 198 aaKnown RBP19.65■□□□□ 0.74
KRT4-201ENST00000548097 MAP2K1Q02750 393 aaPredicted RBP19.65■□□□□ 0.74
KRT4-201ENST00000548097 FAM173BQ6P4H8 233 aa19.65■□□□□ 0.74
KRT4-201ENST00000548097 MROH8Q9H579 483 aa19.65■□□□□ 0.74
KRT4-201ENST00000548097 PNMA2Q9UL42 364 aa19.65■□□□□ 0.74
KRT4-201ENST00000548097 RBBP6Q7Z6E9 1792 aaKnown RBP19.65■□□□□ 0.74
KRT4-201ENST00000548097 CLK2P49760 499 aaKnown RBP19.65■□□□□ 0.74
KRT4-201ENST00000548097 UBXN2AP68543 259 aa19.65■□□□□ 0.74
KRT4-201ENST00000548097 CNTN2Q02246 1040 aa19.65■□□□□ 0.74
KRT4-201ENST00000548097 GNL2Q13823 731 aaKnown RBP19.65■□□□□ 0.74
KRT4-201ENST00000548097 SAFBQ15424 915 aaKnown RBP eCLIP19.65■□□□□ 0.74
KRT4-201ENST00000548097 MCF2L2Q86YR7 1114 aa19.65■□□□□ 0.74
KRT4-201ENST00000548097 REXO1Q8N1G1 1221 aaKnown RBP19.65■□□□□ 0.74
KRT4-201ENST00000548097 SHCBP1Q8NEM2 672 aa19.65■□□□□ 0.74
KRT4-201ENST00000548097 SYTL5Q8TDW5 730 aaPredicted RBP19.65■□□□□ 0.74
KRT4-201ENST00000548097 MMP19Q99542 508 aa19.65■□□□□ 0.74
KRT4-201ENST00000548097 PLXNB2O15031 1838 aa19.64■□□□□ 0.73
KRT4-201ENST00000548097 HSD17B4P51659 736 aa19.64■□□□□ 0.73
KRT4-201ENST00000548097 PIK3AP1Q6ZUJ8 805 aa19.64■□□□□ 0.73
KRT4-201ENST00000548097 DAGLBQ8NCG7 672 aa19.64■□□□□ 0.73
KRT4-201ENST00000548097 CHAMP1Q96JM3 812 aa19.64■□□□□ 0.73
KRT4-201ENST00000548097 BEGAINQ9BUH8 593 aa19.64■□□□□ 0.73
KRT4-201ENST00000548097 FBXO40Q9UH90 709 aa19.64■□□□□ 0.73
KRT4-201ENST00000548097 ZSCAN22P10073 491 aaPredicted RBP19.63■□□□□ 0.73
KRT4-201ENST00000548097 SP3Q02447 781 aa19.63■□□□□ 0.73
KRT4-201ENST00000548097 TNFRSF25Q93038 417 aa19.63■□□□□ 0.73
KRT4-201ENST00000548097 ZFP91Q96JP5 570 aaPredicted RBP19.63■□□□□ 0.73
KRT4-201ENST00000548097 TAAR1Q96RJ0 339 aa19.63■□□□□ 0.73
KRT4-201ENST00000548097 CFHR5Q9BXR6 569 aa19.63■□□□□ 0.73
KRT4-201ENST00000548097 BRMS1Q9HCU9 246 aa19.63■□□□□ 0.73
KRT4-201ENST00000548097 WBP1LQ9NX94 342 aa19.63■□□□□ 0.73
KRT4-201ENST00000548097 DOCK3Q8IZD9 2030 aa19.63■□□□□ 0.73
KRT4-201ENST00000548097 GPR25O00155 361 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 BRD1O95696 1058 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 FCER1AP12319 257 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 LACTBP83111 547 aaPredicted RBP19.62■□□□□ 0.73
KRT4-201ENST00000548097 KCTD2Q14681 263 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 PLEKHH3Q7Z736 793 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 BICD2Q8TD16 824 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 LCTP09848 1927 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 PIK3CDO00329 1044 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 ADORA2AP29274 412 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 MAPK4P31152 587 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 COPB2P35606 906 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 PSMC4P43686 418 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 RESTQ13127 1097 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 GALNT17Q6IS24 598 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 CD99L2Q8TCZ2 262 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 IVNS1ABPQ9Y6Y0 642 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 ASTN1O14525 1302 aa19.62■□□□□ 0.73
KRT4-201ENST00000548097 ZNFX1Q9P2E3 1918 aaKnown RBP19.62■□□□□ 0.73
KRT4-201ENST00000548097 TNPO2O14787 897 aaKnown RBP19.61■□□□□ 0.73
KRT4-201ENST00000548097 F13A1P00488 732 aa19.61■□□□□ 0.73
KRT4-201ENST00000548097 PTPREP23469 700 aa19.61■□□□□ 0.73
KRT4-201ENST00000548097 U2AF2P26368 475 aaKnown RBP eCLIP19.61■□□□□ 0.73
KRT4-201ENST00000548097 NOSTRINQ8IVI9 506 aa19.61■□□□□ 0.73
KRT4-201ENST00000548097 ZNF296Q8WUU4 475 aaPredicted RBP19.61■□□□□ 0.73
KRT4-201ENST00000548097 TRIM47Q96LD4 638 aa19.61■□□□□ 0.73
KRT4-201ENST00000548097 ANO3Q9BYT9 981 aa19.61■□□□□ 0.73
KRT4-201ENST00000548097 FOXP1Q9H334 677 aaPredicted RBP19.61■□□□□ 0.73
KRT4-201ENST00000548097 SAGE1Q9NXZ1 904 aa19.61■□□□□ 0.73
KRT4-201ENST00000548097 SPDYE3A6NKU9 549 aa19.6■□□□□ 0.73
KRT4-201ENST00000548097 WNT7AO00755 349 aa19.6■□□□□ 0.73
KRT4-201ENST00000548097 COBLO75128 1261 aa19.6■□□□□ 0.73
KRT4-201ENST00000548097 EIF2AK2P19525 551 aaKnown RBP19.6■□□□□ 0.73
KRT4-201ENST00000548097 ATP2B1P20020 1258 aa19.6■□□□□ 0.73
KRT4-201ENST00000548097 NBR1Q14596 966 aa19.6■□□□□ 0.73
KRT4-201ENST00000548097 INF2Q27J81 1249 aa19.6■□□□□ 0.73
KRT4-201ENST00000548097 RGS22Q8NE09 1264 aa19.6■□□□□ 0.73
KRT4-201ENST00000548097 MGAMO43451 1857 aa19.6■□□□□ 0.73
KRT4-201ENST00000548097 CCDC194A0A1B0GVG4 234 aa19.6■□□□□ 0.73
KRT4-201ENST00000548097 POTEB2H3BUK9 544 aa19.6■□□□□ 0.73
KRT4-201ENST00000548097 GHRHRQ02643 423 aa19.6■□□□□ 0.73
KRT4-201ENST00000548097 TBCKQ8TEA7 893 aa19.6■□□□□ 0.73
KRT4-201ENST00000548097 PFASO15067 1338 aa19.59■□□□□ 0.73
KRT4-201ENST00000548097 SOWAHBA6NEL2 793 aa19.59■□□□□ 0.73
KRT4-201ENST00000548097 GRB14Q14449 540 aa19.59■□□□□ 0.73
KRT4-201ENST00000548097 FAM177A1Q8N128 213 aaPredicted RBP19.59■□□□□ 0.73
KRT4-201ENST00000548097 IL31RAQ8NI17 732 aa19.59■□□□□ 0.73
KRT4-201ENST00000548097 FGD4Q96M96 766 aa19.59■□□□□ 0.73
KRT4-201ENST00000548097 RMDN3Q96TC7 470 aa19.59■□□□□ 0.73
KRT4-201ENST00000548097 GLT8D2Q9H1C3 349 aa19.59■□□□□ 0.73
KRT4-201ENST00000548097 CHMP5Q9NZZ3 219 aa19.59■□□□□ 0.73
KRT4-201ENST00000548097 DNAJC25-GNG10A0A024R161 153 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms