RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 LRIT3Q3SXY7 679 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 SYDE2Q5VT97 1194 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 NSMFQ6X4W1 530 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 Q7L0L9 218 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 EEPD1Q7L9B9 569 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 TBC1D10CQ8IV04 446 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 DEFB123Q8N688 67 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 FAM133AQ8N9E0 248 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 ESR2Q92731 530 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 TRIM43Q96BQ3 446 aaPredicted RBP7.89□□□□□ -1.15
SCAF11-211ENST00000547950 FGD4Q96M96 766 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 PURBQ96QR8 312 aaKnown RBP7.89□□□□□ -1.15
SCAF11-211ENST00000547950 TSEN34Q9BSV6 310 aaKnown RBP7.89□□□□□ -1.15
SCAF11-211ENST00000547950 RNF41Q9H4P4 317 aaPredicted RBP7.89□□□□□ -1.15
SCAF11-211ENST00000547950 SPC25Q9HBM1 224 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 A1CFQ9NQ94 594 aaKnown RBP7.89□□□□□ -1.15
SCAF11-211ENST00000547950 TCP11L1Q9NUJ3 509 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 DDX49Q9Y6V7 483 aaKnown RBP7.89□□□□□ -1.15
SCAF11-211ENST00000547950 BAZ2AQ9UIF9 1905 aaKnown RBP7.88□□□□□ -1.15
SCAF11-211ENST00000547950 SYNRGQ9UMZ2 1314 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.88□□□□□ -1.15
SCAF11-211ENST00000547950 MYADML2A6NDP7 307 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 ASB14A6NK59 587 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 BHMG1C9JSJ3 638 aaPredicted RBP7.88□□□□□ -1.15
SCAF11-211ENST00000547950 HIP1O00291 1037 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 ADCY6O43306 1168 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 ICAM1P05362 532 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 TNFAIP2Q03169 654 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 BAATQ14032 418 aaPredicted RBP7.88□□□□□ -1.15
SCAF11-211ENST00000547950 SHHQ15465 462 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 GNASQ5JWF2 1037 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 C1orf53Q5VUE5 145 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.88□□□□□ -1.15
SCAF11-211ENST00000547950 KLHDC9Q8NEP7 349 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 NUP133Q8WUM0 1156 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 WNT2BQ93097 391 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 GLT1D1Q96MS3 346 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 TTC14Q96N46 770 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 STARD7Q9NQZ5 370 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 PDLIM7Q9NR12 457 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 TMEM39AQ9NV64 488 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 CYP39A1Q9NYL5 469 aa7.88□□□□□ -1.15
SCAF11-211ENST00000547950 RANBP2P49792 3224 aaKnown RBP7.87□□□□□ -1.15
SCAF11-211ENST00000547950 NEDD4P46934 1319 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 PTPDC1A2A3K4 754 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 MOXD2PA6NHM9 499 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 DCDC2CA8MYV0 355 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 B4E1Z4 1266 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 NFIBO00712 420 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 DYNC1LI2O43237 492 aaPredicted RBP7.87□□□□□ -1.15
SCAF11-211ENST00000547950 KDM4AO75164 1064 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 ASGR1P07306 291 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 CLTBP09497 229 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 GOLGA8HP0CJ92 632 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 PDHBP11177 359 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 PCP11498 1178 aaKnown RBP7.87□□□□□ -1.15
SCAF11-211ENST00000547950 RAG1P15918 1043 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 PTGS1P23219 599 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 ITGB8P26012 769 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 GJA9P57773 515 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 BEX3Q00994 111 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 ZNF543Q08ER8 600 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 IMMTQ16891 758 aaKnown RBP7.87□□□□□ -1.15
SCAF11-211ENST00000547950 PROX2Q3B8N5 592 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 C9orf50Q5SZB4 431 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 CCSAPQ6IQ19 270 aaPredicted RBP7.87□□□□□ -1.15
SCAF11-211ENST00000547950 TYW1BQ6NUM6 668 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 BTNL9Q6UXG8 535 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 PCSK9Q8NBP7 692 aaKnown RBP7.87□□□□□ -1.15
SCAF11-211ENST00000547950 UBA5Q9GZZ9 404 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 AP5M1Q9H0R1 490 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 RANBP17Q9H2T7 1088 aaKnown RBP7.87□□□□□ -1.15
SCAF11-211ENST00000547950 CPVLQ9H3G5 476 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 PDGFCQ9NRA1 345 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 CTNNA3Q9UI47 895 aa7.87□□□□□ -1.15
SCAF11-211ENST00000547950 RLFQ13129 1914 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 ASTN1O14525 1302 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 ZMYM6O95789 1325 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 PPP1R3GB7ZBB8 358 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 SMPD1P17405 629 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 COL9A1P20849 921 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 CALML3P27482 149 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 FAAP100Q0VG06 881 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 TMEM63BQ5T3F8 832 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 IQSEC1Q6DN90 963 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 TAPT1Q6NXT6 567 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 THSD4Q6ZMP0 1018 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 KIAA1211Q6ZU35 1233 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 ANKRD33Q7Z3H0 272 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 IQCA1Q86XH1 822 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 DGKHQ86XP1 1220 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 FBXO16Q8IX29 292 aaPredicted RBP7.86□□□□□ -1.15
SCAF11-211ENST00000547950 SPRYD3Q8NCJ5 442 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 SLC17A8Q8NDX2 589 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 FAM161BQ96MY7 647 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 TOX2Q96NM4 488 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 ZSCAN10Q96SZ4 725 aaPredicted RBP7.86□□□□□ -1.15
SCAF11-211ENST00000547950 DSCC1Q9BVC3 393 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 KATNBL1Q9H079 304 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 KAT14Q9H8E8 782 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms