RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 SLC6A18Q96N87 628 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 KIF13AQ9H1H9 1805 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 A0A1B0GTL3 188 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 MINDY4BA8MYZ0 360 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 F6X3S4 739 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 TLR3O15455 904 aaKnown RBP4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 FGF10O15520 208 aaPredicted RBP4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 SMARCA5O60264 1052 aaPredicted RBP4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 ZBTB7AO95365 584 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 FSHBP01225 129 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 TACR2P21452 398 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 L1CAMP32004 1257 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 ZNF165P49910 485 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 ADGRG2Q8IZP9 1017 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 LGI4Q8N135 537 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 NETO2Q8NC67 525 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 DDX1Q92499 740 aaKnown RBP4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 PEX11GQ96HA9 241 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 CDK5RAP1Q96SZ6 601 aaKnown RBP4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 SLC12A9Q9BXP2 914 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 KRTAP3-1Q9BYR8 98 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 SUCOQ9UBS9 1254 aaKnown RBP4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 MINPP1Q9UNW1 487 aa4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 SF3B6Q9Y3B4 125 aaKnown RBP4.32□□□□□ -1.72
DEPDC4-204ENST00000547823 GREM1O60565 184 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 C6P13671 934 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 EIF4A3P38919 411 aaKnown RBP4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 SURF1Q15526 300 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 ANKRD39Q53RE8 183 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 FAM26FQ5R3K3 315 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 ERMP1Q7Z2K6 904 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 USP48Q86UV5 1035 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 ZNF761Q86XN6 746 aaPredicted RBP4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 TMEM192Q8IY95 271 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 CCDC144CPQ8IYA2 1237 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 KISS1RQ969F8 398 aaPredicted RBP4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 C8orf49Q96NF6 230 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 RNF19AQ9NV58 838 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 VTI1BQ9UEU0 232 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 DUSP10Q9Y6W6 482 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 CLASP1Q7Z460 1538 aa4.31□□□□□ -1.72
DEPDC4-204ENST00000547823 OVOL3O00110 214 aa4.3□□□□□ -1.72
DEPDC4-204ENST00000547823 GLI4P10075 376 aa4.3□□□□□ -1.72
DEPDC4-204ENST00000547823 IMPDH2P12268 514 aa4.3□□□□□ -1.72
DEPDC4-204ENST00000547823 CACNB2Q08289 660 aaPredicted RBP4.3□□□□□ -1.72
DEPDC4-204ENST00000547823 NOL9Q5SY16 702 aaKnown RBP4.3□□□□□ -1.72
DEPDC4-204ENST00000547823 INTS3Q68E01 1043 aaKnown RBP4.3□□□□□ -1.72
DEPDC4-204ENST00000547823 FBXL19Q6PCT2 694 aa4.3□□□□□ -1.72
DEPDC4-204ENST00000547823 PLEKHH3Q7Z736 793 aa4.3□□□□□ -1.72
DEPDC4-204ENST00000547823 ADAMTS17Q8TE56 1095 aa4.3□□□□□ -1.72
DEPDC4-204ENST00000547823 PTCHD1Q96NR3 888 aa4.3□□□□□ -1.72
DEPDC4-204ENST00000547823 SLITRK6Q9H5Y7 841 aa4.3□□□□□ -1.72
DEPDC4-204ENST00000547823 KBTBD4Q9NVX7 518 aa4.3□□□□□ -1.72
DEPDC4-204ENST00000547823 FHOD1Q9Y613 1164 aa4.3□□□□□ -1.72
DEPDC4-204ENST00000547823 PMLP29590 882 aa4.29□□□□□ -1.72
DEPDC4-204ENST00000547823 POU4F1Q01851 419 aa4.29□□□□□ -1.72
DEPDC4-204ENST00000547823 GLB1LQ6UWU2 654 aa4.29□□□□□ -1.72
DEPDC4-204ENST00000547823 TAB3Q8N5C8 712 aaPredicted RBP4.29□□□□□ -1.72
DEPDC4-204ENST00000547823 LINC00482Q8N8I6 264 aa4.29□□□□□ -1.72
DEPDC4-204ENST00000547823 SMARCC2Q8TAQ2 1214 aa4.29□□□□□ -1.72
DEPDC4-204ENST00000547823 TSC22D4Q9Y3Q8 395 aa4.29□□□□□ -1.72
DEPDC4-204ENST00000547823 CFTRP13569 1480 aa4.29□□□□□ -1.72
DEPDC4-204ENST00000547823 MROH2BQ7Z745 1585 aa4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 FZD7O75084 574 aa4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 CYP2C8P10632 490 aa4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 MC3RP41968 323 aa4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 PMS1P54277 932 aaKnown RBP4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 APOBRQ0VD83 1088 aa4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 TBC1D10BQ4KMP7 808 aaPredicted RBP4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 EEF1DP3Q658K8 133 aa4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 RCSD1Q6JBY9 416 aa4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 GK5Q6ZS86 529 aa4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 MRIQ9BWK5 157 aa4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 BCL11AQ9H165 835 aa4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 HCFC2Q9Y5Z7 792 aa4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 PRDM2Q13029 1718 aa4.28□□□□□ -1.72
DEPDC4-204ENST00000547823 AQRO60306 1485 aaKnown RBP eCLIP4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 GAPVD1Q14C86 1478 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 TRBV23OR9-2A0A075B6M9 112 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 A0A087WZG4 1122 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 H0Y8X5 98 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 SHOXO15266 292 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 ITGA4P13612 1032 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 TACR1P25103 407 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 RPL13P26373 211 aaKnown RBP4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 MCM4P33991 863 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 RGL3Q3MIN7 710 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 SEZ6Q53EL9 994 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 CRIP3Q6Q6R5 217 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 LZTR1Q8N653 840 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 ZNF296Q8WUU4 475 aaPredicted RBP4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 RNF34Q969K3 372 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 ZBTB8AQ96BR9 441 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 MENTQ9BUN1 341 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 SYNJ1O43426 1573 aa4.27□□□□□ -1.73
DEPDC4-204ENST00000547823 ZNF536O15090 1300 aa4.26□□□□□ -1.73
DEPDC4-204ENST00000547823 MROH6A6NGR9 719 aa4.26□□□□□ -1.73
DEPDC4-204ENST00000547823 C9orf118A6NHY6 69 aa4.26□□□□□ -1.73
DEPDC4-204ENST00000547823 ACVRL1P37023 503 aa4.26□□□□□ -1.73
DEPDC4-204ENST00000547823 CLCQ05315 142 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms