RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CMTR1Q8N1G2 835 aaKnown RBP21.72■■□□□ 1.07
PRPF40B-206ENST00000547764 MAF1Q9H063 256 aa21.72■■□□□ 1.07
PRPF40B-206ENST00000547764 KATNBL1Q9H079 304 aa21.72■■□□□ 1.07
PRPF40B-206ENST00000547764 FRMPD3Q5JV73 1810 aa21.71■■□□□ 1.07
PRPF40B-206ENST00000547764 KLF18A0A0U1RQI7 1052 aa21.71■■□□□ 1.07
PRPF40B-206ENST00000547764 ZBTB43O43298 467 aa21.71■■□□□ 1.07
PRPF40B-206ENST00000547764 ALDH5A1P51649 535 aaPredicted RBP21.71■■□□□ 1.07
PRPF40B-206ENST00000547764 RRP36Q96EU6 259 aaKnown RBP21.71■■□□□ 1.07
PRPF40B-206ENST00000547764 FAM184BQ9ULE4 1060 aa21.71■■□□□ 1.07
PRPF40B-206ENST00000547764 OPLAHO14841 1288 aa21.7■■□□□ 1.06
PRPF40B-206ENST00000547764 RARBP10826 455 aa21.7■■□□□ 1.06
PRPF40B-206ENST00000547764 TRAF1Q13077 416 aa21.7■■□□□ 1.06
PRPF40B-206ENST00000547764 TMTC3Q6ZXV5 915 aa21.7■■□□□ 1.06
PRPF40B-206ENST00000547764 FBXL16Q8N461 479 aa21.7■■□□□ 1.06
PRPF40B-206ENST00000547764 SYTL5Q8TDW5 730 aaPredicted RBP21.7■■□□□ 1.06
PRPF40B-206ENST00000547764 MORC4Q8TE76 937 aa21.7■■□□□ 1.06
PRPF40B-206ENST00000547764 BRF1Q92994 677 aa21.7■■□□□ 1.06
PRPF40B-206ENST00000547764 ZSWIM6Q9HCJ5 1215 aa21.7■■□□□ 1.06
PRPF40B-206ENST00000547764 LOC102724159A0A0B4J2E5 919 aa21.69■■□□□ 1.06
PRPF40B-206ENST00000547764 APOBRQ0VD83 1088 aa21.69■■□□□ 1.06
PRPF40B-206ENST00000547764 PWP2Q15269 919 aaKnown RBP21.69■■□□□ 1.06
PRPF40B-206ENST00000547764 CCDC144BQ3MJ40 725 aa21.69■■□□□ 1.06
PRPF40B-206ENST00000547764 RUFY3Q7L099 469 aa21.69■■□□□ 1.06
PRPF40B-206ENST00000547764 CCDC82Q8N4S0 544 aa21.69■■□□□ 1.06
PRPF40B-206ENST00000547764 ARRDC4Q8NCT1 418 aa21.69■■□□□ 1.06
PRPF40B-206ENST00000547764 DNERQ8NFT8 737 aa21.69■■□□□ 1.06
PRPF40B-206ENST00000547764 LENG1Q96BZ8 264 aaPredicted RBP21.69■■□□□ 1.06
PRPF40B-206ENST00000547764 HTATIP2Q9BUP3 242 aa21.69■■□□□ 1.06
PRPF40B-206ENST00000547764 C11orf49Q9H6J7 331 aa21.69■■□□□ 1.06
PRPF40B-206ENST00000547764 COL20A1Q9P218 1284 aa21.69■■□□□ 1.06
PRPF40B-206ENST00000547764 CFBP00751 764 aa21.68■■□□□ 1.06
PRPF40B-206ENST00000547764 RTN1Q16799 776 aa21.68■■□□□ 1.06
PRPF40B-206ENST00000547764 GJC2Q5T442 439 aaPredicted RBP21.68■■□□□ 1.06
PRPF40B-206ENST00000547764 EEPD1Q7L9B9 569 aa21.68■■□□□ 1.06
PRPF40B-206ENST00000547764 TAAR1Q96RJ0 339 aa21.68■■□□□ 1.06
PRPF40B-206ENST00000547764 AGXT2Q9BYV1 514 aa21.68■■□□□ 1.06
PRPF40B-206ENST00000547764 TM6SF1Q9BZW5 370 aa21.68■■□□□ 1.06
PRPF40B-206ENST00000547764 XPNPEP3Q9NQH7 507 aa21.68■■□□□ 1.06
PRPF40B-206ENST00000547764 RBM28Q9NW13 759 aaKnown RBP21.68■■□□□ 1.06
PRPF40B-206ENST00000547764 SEC63Q9UGP8 760 aaKnown RBP21.68■■□□□ 1.06
PRPF40B-206ENST00000547764 NAP1L2Q9ULW6 460 aaPredicted RBP21.68■■□□□ 1.06
PRPF40B-206ENST00000547764 GOLGA8AA7E2F4 631 aa21.67■■□□□ 1.06
PRPF40B-206ENST00000547764 GOLGA8BA8MQT2 603 aa21.67■■□□□ 1.06
PRPF40B-206ENST00000547764 DNM1LO00429 736 aa21.67■■□□□ 1.06
PRPF40B-206ENST00000547764 ADCY6O43306 1168 aa21.67■■□□□ 1.06
PRPF40B-206ENST00000547764 MYCNP04198 464 aaPredicted RBP21.67■■□□□ 1.06
PRPF40B-206ENST00000547764 COL6A1P12109 1028 aa21.67■■□□□ 1.06
PRPF40B-206ENST00000547764 HSD17B4P51659 736 aa21.67■■□□□ 1.06
PRPF40B-206ENST00000547764 RCAN1P53805 252 aa21.67■■□□□ 1.06
PRPF40B-206ENST00000547764 GHRHRQ02643 423 aa21.67■■□□□ 1.06
PRPF40B-206ENST00000547764 FBXO16Q8IX29 292 aaPredicted RBP21.67■■□□□ 1.06
PRPF40B-206ENST00000547764 FAM217BQ9NTX9 383 aaPredicted RBP21.67■■□□□ 1.06
PRPF40B-206ENST00000547764 CYP46A1Q9Y6A2 500 aa21.67■■□□□ 1.06
PRPF40B-206ENST00000547764 hCG_1642624A0A1W2PR95 340 aa21.66■■□□□ 1.06
PRPF40B-206ENST00000547764 EIF5BO60841 1220 aaKnown RBP21.66■■□□□ 1.06
PRPF40B-206ENST00000547764 SEC24BO95487 1268 aa21.66■■□□□ 1.06
PRPF40B-206ENST00000547764 PGK1P00558 417 aa21.66■■□□□ 1.06
PRPF40B-206ENST00000547764 EDNRBP24530 442 aa21.66■■□□□ 1.06
PRPF40B-206ENST00000547764 LRRC41Q15345 812 aa21.66■■□□□ 1.06
PRPF40B-206ENST00000547764 TAPT1Q6NXT6 567 aa21.66■■□□□ 1.06
PRPF40B-206ENST00000547764 DPF3Q92784 378 aa21.66■■□□□ 1.06
PRPF40B-206ENST00000547764 MPHOSPH6Q99547 160 aaKnown RBP21.66■■□□□ 1.06
PRPF40B-206ENST00000547764 UPF3BQ9BZI7 483 aaKnown RBP21.66■■□□□ 1.06
PRPF40B-206ENST00000547764 VTA1Q9NP79 307 aa21.66■■□□□ 1.06
PRPF40B-206ENST00000547764 PDGFCQ9NRA1 345 aa21.66■■□□□ 1.06
PRPF40B-206ENST00000547764 MAP3K20Q9NYL2 800 aaKnown RBP21.66■■□□□ 1.06
PRPF40B-206ENST00000547764 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.65■■□□□ 1.06
PRPF40B-206ENST00000547764 DUSP11O75319 330 aaKnown RBP21.65■■□□□ 1.06
PRPF40B-206ENST00000547764 CDC27P30260 824 aa21.65■■□□□ 1.06
PRPF40B-206ENST00000547764 HOXA13P31271 388 aaPredicted RBP21.65■■□□□ 1.06
PRPF40B-206ENST00000547764 ADCYAP1R1P41586 468 aa21.65■■□□□ 1.06
PRPF40B-206ENST00000547764 PDE4DQ08499 809 aa21.65■■□□□ 1.06
PRPF40B-206ENST00000547764 SAMD3Q8N6K7 520 aa21.65■■□□□ 1.06
PRPF40B-206ENST00000547764 NSUN6Q8TEA1 469 aaKnown RBP21.65■■□□□ 1.06
PRPF40B-206ENST00000547764 RMDN3Q96TC7 470 aa21.65■■□□□ 1.06
PRPF40B-206ENST00000547764 CNTNAP5Q8WYK1 1306 aa21.64■■□□□ 1.05
PRPF40B-206ENST00000547764 SYNRGQ9UMZ2 1314 aa21.64■■□□□ 1.05
PRPF40B-206ENST00000547764 B4DLN1 442 aa21.64■■□□□ 1.05
PRPF40B-206ENST00000547764 KBTBD13C9JR72 458 aa21.64■■□□□ 1.05
PRPF40B-206ENST00000547764 GCOM1H8Y6P7 765 aaPredicted RBP21.64■■□□□ 1.05
PRPF40B-206ENST00000547764 ADAMTS4O75173 837 aa21.64■■□□□ 1.05
PRPF40B-206ENST00000547764 POLR2MP0CAP2 368 aa21.64■■□□□ 1.05
PRPF40B-206ENST00000547764 METAP2P50579 478 aaKnown RBP eCLIP21.64■■□□□ 1.05
PRPF40B-206ENST00000547764 MRPL12P52815 198 aaKnown RBP21.64■■□□□ 1.05
PRPF40B-206ENST00000547764 TNFAIP2Q03169 654 aa21.64■■□□□ 1.05
PRPF40B-206ENST00000547764 FUT2Q10981 343 aa21.64■■□□□ 1.05
PRPF40B-206ENST00000547764 TOB2Q14106 344 aaPredicted RBP21.64■■□□□ 1.05
PRPF40B-206ENST00000547764 SENP6Q9GZR1 1112 aaPredicted RBP21.64■■□□□ 1.05
PRPF40B-206ENST00000547764 LRRC37A2A6NM11 1700 aa21.63■■□□□ 1.05
PRPF40B-206ENST00000547764 ADD1P35611 737 aaKnown RBP21.63■■□□□ 1.05
PRPF40B-206ENST00000547764 EVCP57679 992 aa21.63■■□□□ 1.05
PRPF40B-206ENST00000547764 ANAPC15P60006 121 aa21.63■■□□□ 1.05
PRPF40B-206ENST00000547764 PPP2R5BQ15173 497 aa21.63■■□□□ 1.05
PRPF40B-206ENST00000547764 ARHGEF16Q5VV41 709 aa21.63■■□□□ 1.05
PRPF40B-206ENST00000547764 IQSEC1Q6DN90 963 aa21.63■■□□□ 1.05
PRPF40B-206ENST00000547764 RNF180Q86T96 592 aa21.63■■□□□ 1.05
PRPF40B-206ENST00000547764 SMPD1P17405 629 aa21.62■■□□□ 1.05
PRPF40B-206ENST00000547764 EIF2AK2P19525 551 aaKnown RBP21.62■■□□□ 1.05
PRPF40B-206ENST00000547764 C8orf34Q49A92 452 aa21.62■■□□□ 1.05
PRPF40B-206ENST00000547764 NOL8Q76FK4 1167 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms