RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 FAM98CQ17RN3 349 aaKnown RBP16.33■□□□□ 0.2
LETMD1-209ENST00000547318 TMC4Q7Z404 712 aa16.33■□□□□ 0.2
LETMD1-209ENST00000547318 CCDC84Q86UT8 332 aaPredicted RBP16.33■□□□□ 0.2
LETMD1-209ENST00000547318 CNBD1Q8NA66 436 aa16.33■□□□□ 0.2
LETMD1-209ENST00000547318 ARHGEF1Q92888 912 aaKnown RBP16.33■□□□□ 0.2
LETMD1-209ENST00000547318 VIPAS39Q9H9C1 493 aa16.33■□□□□ 0.2
LETMD1-209ENST00000547318 PUF60Q9UHX1 559 aaKnown RBP16.33■□□□□ 0.2
LETMD1-209ENST00000547318 SUGT1Q9Y2Z0 365 aa16.33■□□□□ 0.2
LETMD1-209ENST00000547318 RNF225M0QZC1 329 aaPredicted RBP16.32■□□□□ 0.2
LETMD1-209ENST00000547318 RFC4P35249 363 aa16.32■□□□□ 0.2
LETMD1-209ENST00000547318 BTDP43251 543 aa16.32■□□□□ 0.2
LETMD1-209ENST00000547318 LRRC63Q05C16 580 aa16.32■□□□□ 0.2
LETMD1-209ENST00000547318 CENPPQ6IPU0 288 aa16.32■□□□□ 0.2
LETMD1-209ENST00000547318 UNC13DQ70J99 1090 aa16.32■□□□□ 0.2
LETMD1-209ENST00000547318 SV2BQ7L1I2 683 aa16.32■□□□□ 0.2
LETMD1-209ENST00000547318 TEX11Q8IYF3 940 aa16.32■□□□□ 0.2
LETMD1-209ENST00000547318 CNOT6LQ96LI5 555 aaKnown RBP16.32■□□□□ 0.2
LETMD1-209ENST00000547318 L1RE1Q9UN81 338 aa16.32■□□□□ 0.2
LETMD1-209ENST00000547318 REXO2Q9Y3B8 237 aaKnown RBP16.32■□□□□ 0.2
LETMD1-209ENST00000547318 SAR1BQ9Y6B6 198 aa16.32■□□□□ 0.2
LETMD1-209ENST00000547318 CDC25AP30304 524 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 LETM2Q2VYF4 491 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 CCDC122Q5T0U0 273 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 WDR59Q6PJI9 974 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 KIAA1328Q86T90 577 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 FNBP4Q8N3X1 1017 aaPredicted RBP16.31■□□□□ 0.2
LETMD1-209ENST00000547318 PURBQ96QR8 312 aaKnown RBP16.31■□□□□ 0.2
LETMD1-209ENST00000547318 CHP1Q99653 195 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 CD209Q9NNX6 404 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 ST7Q9NRC1 585 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 MAPK8IP1Q9UQF2 711 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 PP2D1A8MPX8 630 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 MTIF2P46199 727 aaKnown RBP16.31■□□□□ 0.2
LETMD1-209ENST00000547318 PMS1P54277 932 aaKnown RBP16.31■□□□□ 0.2
LETMD1-209ENST00000547318 GUF1Q8N442 669 aaKnown RBP16.31■□□□□ 0.2
LETMD1-209ENST00000547318 RPGRQ92834 1020 aaKnown RBP16.31■□□□□ 0.2
LETMD1-209ENST00000547318 JAKMIP2Q96AA8 810 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 NOC4LQ9BVI4 516 aaKnown RBP16.31■□□□□ 0.2
LETMD1-209ENST00000547318 MED4Q9NPJ6 270 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 PODXL2Q9NZ53 605 aa16.31■□□□□ 0.2
LETMD1-209ENST00000547318 NUTM2BA6NNL0 878 aaPredicted RBP16.3■□□□□ 0.2
LETMD1-209ENST00000547318 NUTM2EB1AL46 878 aaPredicted RBP16.3■□□□□ 0.2
LETMD1-209ENST00000547318 B4DLN1 442 aa16.3■□□□□ 0.2
LETMD1-209ENST00000547318 PES1O00541 588 aaKnown RBP16.3■□□□□ 0.2
LETMD1-209ENST00000547318 HMGB2P26583 209 aaKnown RBP16.3■□□□□ 0.2
LETMD1-209ENST00000547318 ITIH3Q06033 890 aa16.3■□□□□ 0.2
LETMD1-209ENST00000547318 CRY2Q49AN0 593 aa16.3■□□□□ 0.2
LETMD1-209ENST00000547318 MAPKAPK5Q8IW41 473 aa16.3■□□□□ 0.2
LETMD1-209ENST00000547318 PROM2Q8N271 834 aa16.3■□□□□ 0.2
LETMD1-209ENST00000547318 MTMR9Q96QG7 549 aa16.3■□□□□ 0.2
LETMD1-209ENST00000547318 GLT8D2Q9H1C3 349 aa16.3■□□□□ 0.2
LETMD1-209ENST00000547318 RIC8AQ9NPQ8 531 aa16.3■□□□□ 0.2
LETMD1-209ENST00000547318 GGA1Q9UJY5 639 aa16.3■□□□□ 0.2
LETMD1-209ENST00000547318 GUCA1BQ9UMX6 200 aa16.3■□□□□ 0.2
LETMD1-209ENST00000547318 LRRC37AA6NMS7 1700 aa16.3■□□□□ 0.2
LETMD1-209ENST00000547318 USO1O60763 962 aaKnown RBP16.29■□□□□ 0.2
LETMD1-209ENST00000547318 BBOX1O75936 387 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 HERVK_113P62684 666 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 SPA17Q15506 151 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 DIXDC1Q155Q3 683 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 MUM1L1Q5H9M0 696 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 ANKRD40Q6AI12 368 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 CCDC70Q6NSX1 233 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 TBCKQ8TEA7 893 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
LETMD1-209ENST00000547318 CDK5RAP3Q96JB5 506 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 EPC1Q9H2F5 836 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 QSER1Q2KHR3 1735 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 A0A0U1RQJ8 604 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 GCFC2P16383 781 aaKnown RBP16.29■□□□□ 0.2
LETMD1-209ENST00000547318 PRLRP16471 622 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 ADCY7P51828 1080 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 VAV2P52735 878 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 CALCRLQ16602 461 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 MAN2A1Q16706 1144 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 PPP4R3AQ6IN85 833 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 TRIM58Q8NG06 486 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 ATRIPQ8WXE1 791 aa16.29■□□□□ 0.2
LETMD1-209ENST00000547318 NUCKS1Q9H1E3 243 aaKnown RBP16.29■□□□□ 0.2
LETMD1-209ENST00000547318 NHEJ1Q9H9Q4 299 aaPredicted RBP16.29■□□□□ 0.2
LETMD1-209ENST00000547318 LCA5LO95447 670 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 SNHG28P0DPA3 235 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 USP14P54578 494 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 RHBDL3P58872 404 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 ST5P78524 1137 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 KIF5AQ12840 1032 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 HSP90B2PQ58FF3 399 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 MIIPQ5JXC2 388 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 FAM71BQ8TC56 605 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 PNKPQ96T60 521 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 TSG101Q99816 390 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 LRWD1Q9UFC0 647 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 SWAP70Q9UH65 585 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 PLAGL2Q9UPG8 496 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 POLR3GO15318 223 aaPredicted RBP16.28■□□□□ 0.2
LETMD1-209ENST00000547318 COBLO75128 1261 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 STK4Q13043 487 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 VWA3BQ502W6 1294 aa16.28■□□□□ 0.2
LETMD1-209ENST00000547318 CCDC155Q8N6L0 562 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms