RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 KAT14Q9H8E8 782 aa16.85■□□□□ 0.29
COL2A1-209ENST00000546974 CNNM2Q9H8M5 875 aa16.85■□□□□ 0.29
COL2A1-209ENST00000546974 TLR3O15455 904 aaKnown RBP16.84■□□□□ 0.29
COL2A1-209ENST00000546974 GOLGA8HP0CJ92 632 aa16.84■□□□□ 0.29
COL2A1-209ENST00000546974 GSPT1P15170 499 aaKnown RBP16.84■□□□□ 0.29
COL2A1-209ENST00000546974 RPS6P62753 249 aaKnown RBP16.84■□□□□ 0.29
COL2A1-209ENST00000546974 ASPRV1Q53RT3 343 aa16.84■□□□□ 0.29
COL2A1-209ENST00000546974 SLC30A10Q6XR72 485 aa16.84■□□□□ 0.29
COL2A1-209ENST00000546974 FAM126BQ8IXS8 530 aa16.84■□□□□ 0.29
COL2A1-209ENST00000546974 ENAHQ8N8S7 591 aaPredicted RBP16.84■□□□□ 0.29
COL2A1-209ENST00000546974 SLC43A3Q8NBI5 491 aa16.84■□□□□ 0.29
COL2A1-209ENST00000546974 RGS22Q8NE09 1264 aa16.84■□□□□ 0.29
COL2A1-209ENST00000546974 SEZ6LQ9BYH1 1024 aa16.84■□□□□ 0.29
COL2A1-209ENST00000546974 UBA5Q9GZZ9 404 aa16.84■□□□□ 0.29
COL2A1-209ENST00000546974 IL25Q9H293 177 aa16.84■□□□□ 0.29
COL2A1-209ENST00000546974 CDH23Q9H251 3354 aa16.83■□□□□ 0.29
COL2A1-209ENST00000546974 RBM47A0AV96 593 aaKnown RBP16.83■□□□□ 0.28
COL2A1-209ENST00000546974 TNKSO95271 1327 aa16.83■□□□□ 0.28
COL2A1-209ENST00000546974 CALML3P27482 149 aa16.83■□□□□ 0.28
COL2A1-209ENST00000546974 EPHB4P54760 987 aa16.83■□□□□ 0.28
COL2A1-209ENST00000546974 SMAD3P84022 425 aaKnown RBP16.83■□□□□ 0.28
COL2A1-209ENST00000546974 DUSP28Q4G0W2 176 aa16.83■□□□□ 0.28
COL2A1-209ENST00000546974 MFSD5Q6N075 450 aa16.83■□□□□ 0.28
COL2A1-209ENST00000546974 CXCL17Q6UXB2 119 aa16.83■□□□□ 0.28
COL2A1-209ENST00000546974 DNERQ8NFT8 737 aa16.83■□□□□ 0.28
COL2A1-209ENST00000546974 RAD50Q92878 1312 aa16.83■□□□□ 0.28
COL2A1-209ENST00000546974 MPHOSPH6Q99547 160 aaKnown RBP16.83■□□□□ 0.28
COL2A1-209ENST00000546974 B4DLN1 442 aa16.82■□□□□ 0.28
COL2A1-209ENST00000546974 CD4P01730 458 aa16.82■□□□□ 0.28
COL2A1-209ENST00000546974 PTGS1P23219 599 aa16.82■□□□□ 0.28
COL2A1-209ENST00000546974 EDNRBP24530 442 aa16.82■□□□□ 0.28
COL2A1-209ENST00000546974 MRPL12P52815 198 aaKnown RBP16.82■□□□□ 0.28
COL2A1-209ENST00000546974 USH1GQ495M9 461 aa16.82■□□□□ 0.28
COL2A1-209ENST00000546974 TMEM63BQ5T3F8 832 aa16.82■□□□□ 0.28
COL2A1-209ENST00000546974 ZNF697Q5TEC3 545 aa16.82■□□□□ 0.28
COL2A1-209ENST00000546974 ADGRF4Q8IZF3 695 aa16.82■□□□□ 0.28
COL2A1-209ENST00000546974 SLC17A8Q8NDX2 589 aa16.82■□□□□ 0.28
COL2A1-209ENST00000546974 RUFY2Q8WXA3 655 aa16.82■□□□□ 0.28
COL2A1-209ENST00000546974 RNPC3Q96LT9 517 aaKnown RBP16.82■□□□□ 0.28
COL2A1-209ENST00000546974 WDR11Q9BZH6 1224 aa16.82■□□□□ 0.28
COL2A1-209ENST00000546974 CPVLQ9H3G5 476 aa16.82■□□□□ 0.28
COL2A1-209ENST00000546974 ABCB11O95342 1321 aa16.81■□□□□ 0.28
COL2A1-209ENST00000546974 UNC80Q8N2C7 3258 aa16.81■□□□□ 0.28
COL2A1-209ENST00000546974 PARP1P09874 1014 aaKnown RBP16.81■□□□□ 0.28
COL2A1-209ENST00000546974 PDE4DQ08499 809 aa16.81■□□□□ 0.28
COL2A1-209ENST00000546974 ITGA7Q13683 1181 aa16.81■□□□□ 0.28
COL2A1-209ENST00000546974 CDC37Q16543 378 aaPredicted RBP16.81■□□□□ 0.28
COL2A1-209ENST00000546974 GUCD1Q96NT3 240 aa16.81■□□□□ 0.28
COL2A1-209ENST00000546974 UBAC1Q9BSL1 405 aa16.81■□□□□ 0.28
COL2A1-209ENST00000546974 EYSQ5T1H1 3165 aa16.8■□□□□ 0.28
COL2A1-209ENST00000546974 GRIN2DO15399 1336 aa16.8■□□□□ 0.28
COL2A1-209ENST00000546974 CHMLP26374 656 aa16.8■□□□□ 0.28
COL2A1-209ENST00000546974 PPIGQ13427 754 aaKnown RBP eCLIP16.8■□□□□ 0.285e-11■■■■■ 47.3
COL2A1-209ENST00000546974 IFIT1BQ5T764 474 aaKnown RBP16.8■□□□□ 0.28
COL2A1-209ENST00000546974 TMEM199Q8N511 208 aa16.8■□□□□ 0.28
COL2A1-209ENST00000546974 POLR3EQ9NVU0 708 aa16.8■□□□□ 0.28
COL2A1-209ENST00000546974 NKRFO15226 690 aaKnown RBP eCLIP16.79■□□□□ 0.28
COL2A1-209ENST00000546974 CPT1AP50416 773 aa16.79■□□□□ 0.28
COL2A1-209ENST00000546974 IRX6P78412 446 aaPredicted RBP16.79■□□□□ 0.28
COL2A1-209ENST00000546974 SEC23AQ15436 765 aa16.79■□□□□ 0.28
COL2A1-209ENST00000546974 FAM161BQ96MY7 647 aa16.79■□□□□ 0.28
COL2A1-209ENST00000546974 SEMA6BQ9H3T3 888 aa16.79■□□□□ 0.28
COL2A1-209ENST00000546974 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
COL2A1-209ENST00000546974 TRDNQ13061 729 aa16.78■□□□□ 0.28
COL2A1-209ENST00000546974 PPP2R5BQ15173 497 aa16.78■□□□□ 0.28
COL2A1-209ENST00000546974 QRICH1Q2TAL8 776 aa16.78■□□□□ 0.28
COL2A1-209ENST00000546974 CYB5R4Q7L1T6 521 aa16.78■□□□□ 0.28
COL2A1-209ENST00000546974 FBXO11Q86XK2 927 aa16.78■□□□□ 0.28
COL2A1-209ENST00000546974 MCF2L2Q86YR7 1114 aa16.78■□□□□ 0.28
COL2A1-209ENST00000546974 OR6J1Q8NGC5 347 aa16.78■□□□□ 0.28
COL2A1-209ENST00000546974 SCFD2Q8WU76 684 aa16.78■□□□□ 0.28
COL2A1-209ENST00000546974 TBC1D5Q92609 795 aa16.78■□□□□ 0.28
COL2A1-209ENST00000546974 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■■□□□ 12.8
COL2A1-209ENST00000546974 PPP1R12CQ9BZL4 782 aa16.78■□□□□ 0.28
COL2A1-209ENST00000546974 JMJD4Q9H9V9 463 aa16.78■□□□□ 0.28
COL2A1-209ENST00000546974 VAT1LQ9HCJ6 419 aa16.78■□□□□ 0.28
COL2A1-209ENST00000546974 MRPL11Q9Y3B7 192 aaKnown RBP16.78■□□□□ 0.28
COL2A1-209ENST00000546974 KIAA1217Q5T5P2 1943 aa16.78■□□□□ 0.28
COL2A1-209ENST00000546974 SCN10AQ9Y5Y9 1956 aa16.77■□□□□ 0.28
COL2A1-209ENST00000546974 TMEM265A0A087WTH1 108 aa16.77■□□□□ 0.28
COL2A1-209ENST00000546974 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.77■□□□□ 0.28
COL2A1-209ENST00000546974 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.77■□□□□ 0.28
COL2A1-209ENST00000546974 DHX16O60231 1041 aaKnown RBP16.77■□□□□ 0.28
COL2A1-209ENST00000546974 CYP21A2P08686 494 aa16.77■□□□□ 0.28
COL2A1-209ENST00000546974 CSF2RAP15509 400 aa16.77■□□□□ 0.28
COL2A1-209ENST00000546974 PSMC6P62333 389 aa16.77■□□□□ 0.28
COL2A1-209ENST00000546974 PURAQ00577 322 aaKnown RBP16.77■□□□□ 0.28
COL2A1-209ENST00000546974 PTH1RQ03431 593 aa16.77■□□□□ 0.28
COL2A1-209ENST00000546974 BRDTQ58F21 947 aaPredicted RBP16.77■□□□□ 0.28
COL2A1-209ENST00000546974 TMEM240Q5SV17 173 aa16.77■□□□□ 0.28
COL2A1-209ENST00000546974 C16orf59Q7L2K0 433 aa16.77■□□□□ 0.28
COL2A1-209ENST00000546974 SYTL5Q8TDW5 730 aaPredicted RBP16.77■□□□□ 0.28
COL2A1-209ENST00000546974 PRUNE2Q8WUY3 3088 aa16.77■□□□□ 0.27
COL2A1-209ENST00000546974 BAZ2BQ9UIF8 2168 aaKnown RBP16.77■□□□□ 0.27
COL2A1-209ENST00000546974 SGSM2O43147 1006 aa16.76■□□□□ 0.27
COL2A1-209ENST00000546974 B4GALT4O60513 344 aa16.76■□□□□ 0.27
COL2A1-209ENST00000546974 CYP2C18P33260 490 aa16.76■□□□□ 0.27
COL2A1-209ENST00000546974 TTLL4Q14679 1199 aa16.76■□□□□ 0.27
COL2A1-209ENST00000546974 PSRC1Q6PGN9 363 aaPredicted RBP16.76■□□□□ 0.27
COL2A1-209ENST00000546974 STAG2Q8N3U4 1231 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms