RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 CAPN2P17655 700 aa19.41■□□□□ 0.7
CCDC38-203ENST00000546803 RABEP1Q15276 862 aa19.41■□□□□ 0.7
CCDC38-203ENST00000546803 NTRK3Q16288 839 aa19.41■□□□□ 0.7
CCDC38-203ENST00000546803 SLC30A10Q6XR72 485 aa19.41■□□□□ 0.7
CCDC38-203ENST00000546803 ZNF713Q8N859 430 aaPredicted RBP19.41■□□□□ 0.7
CCDC38-203ENST00000546803 DNERQ8NFT8 737 aa19.41■□□□□ 0.7
CCDC38-203ENST00000546803 UNC93B1Q9H1C4 597 aa19.41■□□□□ 0.7
CCDC38-203ENST00000546803 SLKQ9H2G2 1235 aaPredicted RBP19.41■□□□□ 0.7
CCDC38-203ENST00000546803 PLXNB2O15031 1838 aa19.41■□□□□ 0.7
CCDC38-203ENST00000546803 B4DLN1 442 aa19.4■□□□□ 0.7
CCDC38-203ENST00000546803 CPLX1O14810 134 aa19.4■□□□□ 0.7
CCDC38-203ENST00000546803 OPLAHO14841 1288 aa19.4■□□□□ 0.7
CCDC38-203ENST00000546803 PRPF3O43395 683 aaKnown RBP19.4■□□□□ 0.7
CCDC38-203ENST00000546803 PFKFB2O60825 505 aa19.4■□□□□ 0.7
CCDC38-203ENST00000546803 CFBP00751 764 aa19.4■□□□□ 0.7
CCDC38-203ENST00000546803 GJB1P08034 283 aa19.4■□□□□ 0.7
CCDC38-203ENST00000546803 HSD17B4P51659 736 aa19.4■□□□□ 0.7
CCDC38-203ENST00000546803 MRPL12P52815 198 aaKnown RBP19.4■□□□□ 0.7
CCDC38-203ENST00000546803 AKAP17AQ02040 695 aaKnown RBP19.4■□□□□ 0.7
CCDC38-203ENST00000546803 SYTL5Q8TDW5 730 aaPredicted RBP19.4■□□□□ 0.7
CCDC38-203ENST00000546803 MPHOSPH6Q99547 160 aaKnown RBP19.4■□□□□ 0.7
CCDC38-203ENST00000546803 RNF26Q9BY78 433 aaPredicted RBP19.4■□□□□ 0.7
CCDC38-203ENST00000546803 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCDC38-203ENST00000546803 NCOA5Q9HCD5 579 aaKnown RBP19.4■□□□□ 0.7
CCDC38-203ENST00000546803 PAK6Q9NQU5 681 aaPredicted RBP19.4■□□□□ 0.7
CCDC38-203ENST00000546803 CNPY2Q9Y2B0 182 aa19.4■□□□□ 0.7
CCDC38-203ENST00000546803 hCG_1642624A0A1W2PR95 340 aa19.39■□□□□ 0.69
CCDC38-203ENST00000546803 GCOM1H8Y6P7 765 aaPredicted RBP19.39■□□□□ 0.69
CCDC38-203ENST00000546803 POLR2MP0CAP2 368 aa19.39■□□□□ 0.69
CCDC38-203ENST00000546803 CYBAP13498 195 aa19.39■□□□□ 0.69
CCDC38-203ENST00000546803 STK3Q13188 491 aa19.39■□□□□ 0.69
CCDC38-203ENST00000546803 HEATR3Q7Z4Q2 680 aa19.39■□□□□ 0.69
CCDC38-203ENST00000546803 TEX2Q8IWB9 1127 aa19.39■□□□□ 0.69
CCDC38-203ENST00000546803 TBC1D5Q92609 795 aa19.39■□□□□ 0.69
CCDC38-203ENST00000546803 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.39■□□□□ 0.69
CCDC38-203ENST00000546803 DOCK3Q8IZD9 2030 aa19.39■□□□□ 0.69
CCDC38-203ENST00000546803 CDKL5O76039 1030 aa19.38■□□□□ 0.69
CCDC38-203ENST00000546803 SNAI1O95863 264 aaPredicted RBP19.38■□□□□ 0.69
CCDC38-203ENST00000546803 ALDH5A1P51649 535 aaPredicted RBP19.38■□□□□ 0.69
CCDC38-203ENST00000546803 PFKFB3Q16875 520 aaPredicted RBP19.38■□□□□ 0.69
CCDC38-203ENST00000546803 PPP1R18Q6NYC8 613 aa19.38■□□□□ 0.69
CCDC38-203ENST00000546803 ARMCX2Q7L311 632 aa19.38■□□□□ 0.69
CCDC38-203ENST00000546803 TRIM22Q8IYM9 498 aa19.38■□□□□ 0.69
CCDC38-203ENST00000546803 MORC4Q8TE76 937 aa19.38■□□□□ 0.69
CCDC38-203ENST00000546803 PURBQ96QR8 312 aaKnown RBP19.38■□□□□ 0.69
CCDC38-203ENST00000546803 ABHD16BQ9H3Z7 469 aa19.38■□□□□ 0.69
CCDC38-203ENST00000546803 LIMCH1Q9UPQ0 1083 aa19.38■□□□□ 0.69
CCDC38-203ENST00000546803 ASTN1O14525 1302 aa19.37■□□□□ 0.69
CCDC38-203ENST00000546803 MSCO60682 206 aa19.37■□□□□ 0.69
CCDC38-203ENST00000546803 SCG2P13521 617 aa19.37■□□□□ 0.69
CCDC38-203ENST00000546803 CCND3P30281 292 aaPredicted RBP19.37■□□□□ 0.69
CCDC38-203ENST00000546803 SSRP1Q08945 709 aaKnown RBP19.37■□□□□ 0.69
CCDC38-203ENST00000546803 SCRN1Q12765 414 aa19.37■□□□□ 0.69
CCDC38-203ENST00000546803 WWC2Q6AWC2 1192 aa19.37■□□□□ 0.69
CCDC38-203ENST00000546803 TRPV1Q8NER1 839 aa19.37■□□□□ 0.69
CCDC38-203ENST00000546803 NSUN6Q8TEA1 469 aaKnown RBP19.37■□□□□ 0.69
CCDC38-203ENST00000546803 CUL5Q93034 780 aa19.37■□□□□ 0.69
CCDC38-203ENST00000546803 PHKBQ93100 1093 aa19.37■□□□□ 0.69
CCDC38-203ENST00000546803 SLC26A6Q9BXS9 759 aa19.37■□□□□ 0.69
CCDC38-203ENST00000546803 PSTPIP2Q9H939 334 aa19.37■□□□□ 0.69
CCDC38-203ENST00000546803 BARHL2Q9NY43 387 aa19.37■□□□□ 0.69
CCDC38-203ENST00000546803 PIK3CDO00329 1044 aa19.36■□□□□ 0.69
CCDC38-203ENST00000546803 SEPT4O43236 478 aa19.36■□□□□ 0.69
CCDC38-203ENST00000546803 ST18O60284 1047 aa19.36■□□□□ 0.69
CCDC38-203ENST00000546803 SGPL1O95470 568 aa19.36■□□□□ 0.69
CCDC38-203ENST00000546803 CNGA1P29973 690 aa19.36■□□□□ 0.69
CCDC38-203ENST00000546803 GJA8P48165 433 aa19.36■□□□□ 0.69
CCDC38-203ENST00000546803 ACVR2BQ13705 512 aa19.36■□□□□ 0.69
CCDC38-203ENST00000546803 ME3Q16798 604 aa19.36■□□□□ 0.69
CCDC38-203ENST00000546803 PRAMEF19Q5SWL8 479 aa19.36■□□□□ 0.69
CCDC38-203ENST00000546803 NOL8Q76FK4 1167 aaKnown RBP19.36■□□□□ 0.69
CCDC38-203ENST00000546803 GPKOWQ92917 476 aaPredicted RBP eCLIP19.36■□□□□ 0.69
CCDC38-203ENST00000546803 DEFB118Q96PH6 123 aa19.36■□□□□ 0.69
CCDC38-203ENST00000546803 TAAR1Q96RJ0 339 aa19.36■□□□□ 0.69
CCDC38-203ENST00000546803 RMDN3Q96TC7 470 aa19.36■□□□□ 0.69
CCDC38-203ENST00000546803 COL20A1Q9P218 1284 aa19.36■□□□□ 0.69
CCDC38-203ENST00000546803 POTEFA5A3E0 1075 aa19.35■□□□□ 0.69
CCDC38-203ENST00000546803 STXBP3O00186 592 aa19.35■□□□□ 0.69
CCDC38-203ENST00000546803 ZNF865P0CJ78 1059 aaPredicted RBP19.35■□□□□ 0.69
CCDC38-203ENST00000546803 EDNRBP24530 442 aa19.35■□□□□ 0.69
CCDC38-203ENST00000546803 NAPAP54920 295 aa19.35■□□□□ 0.69
CCDC38-203ENST00000546803 PKN1Q16512 942 aa19.35■□□□□ 0.69
CCDC38-203ENST00000546803 U2AF1L4Q8WU68 220 aaKnown RBP19.35■□□□□ 0.69
CCDC38-203ENST00000546803 CCDC12Q8WUD4 166 aaPredicted RBP19.35■□□□□ 0.69
CCDC38-203ENST00000546803 ZSCAN31Q96LW9 406 aaPredicted RBP19.35■□□□□ 0.69
CCDC38-203ENST00000546803 IWS1Q96ST2 819 aa19.35■□□□□ 0.69
CCDC38-203ENST00000546803 GLT8D2Q9H1C3 349 aa19.35■□□□□ 0.69
CCDC38-203ENST00000546803 DDX20Q9UHI6 824 aaKnown RBP19.35■□□□□ 0.69
CCDC38-203ENST00000546803 DEXIO95424 95 aa19.34■□□□□ 0.69
CCDC38-203ENST00000546803 HOXA13P31271 388 aaPredicted RBP19.34■□□□□ 0.69
CCDC38-203ENST00000546803 SOX10P56693 466 aa19.34■□□□□ 0.69
CCDC38-203ENST00000546803 PDE4DQ08499 809 aa19.34■□□□□ 0.69
CCDC38-203ENST00000546803 ARHGEF16Q5VV41 709 aa19.34■□□□□ 0.69
CCDC38-203ENST00000546803 SMARCC2Q8TAQ2 1214 aa19.34■□□□□ 0.69
CCDC38-203ENST00000546803 GTF3C6Q969F1 213 aa19.34■□□□□ 0.69
CCDC38-203ENST00000546803 KATNBL1Q9H079 304 aa19.34■□□□□ 0.69
CCDC38-203ENST00000546803 CRISPLD2Q9H0B8 497 aa19.34■□□□□ 0.69
CCDC38-203ENST00000546803 VTA1Q9NP79 307 aa19.34■□□□□ 0.69
CCDC38-203ENST00000546803 ZHX1Q9UKY1 873 aaPredicted RBP19.34■□□□□ 0.69
CCDC38-203ENST00000546803 FAM184BQ9ULE4 1060 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms