RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 GAS7O60861 476 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 GMPSP49915 693 aaPredicted RBP11.45□□□□□ -0.58
SSH1-203ENST00000546433 ELF2Q15723 593 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 FOXP4Q8IVH2 680 aaPredicted RBP11.45□□□□□ -0.58
SSH1-203ENST00000546433 ARHGAP24Q8N264 748 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 OSBPL3Q9H4L5 887 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 GBA2Q9HCG7 927 aaPredicted RBP11.45□□□□□ -0.58
SSH1-203ENST00000546433 TMEM63CQ9P1W3 806 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 AMFRQ9UKV5 643 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 MTMR6Q9Y217 621 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 LAD1O00515 517 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 TNPO2O14787 897 aaKnown RBP11.45□□□□□ -0.58
SSH1-203ENST00000546433 CFBP00751 764 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 XRCC5P13010 732 aaKnown RBP11.45□□□□□ -0.58
SSH1-203ENST00000546433 LONP1P36776 959 aaKnown RBP11.45□□□□□ -0.58
SSH1-203ENST00000546433 USH1GQ495M9 461 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 SRGAP1Q7Z6B7 1085 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 CPXCR1Q8N123 301 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 VPS52Q8N1B4 723 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 EAF2Q96CJ1 260 aaPredicted RBP11.45□□□□□ -0.58
SSH1-203ENST00000546433 TRIM6Q9C030 488 aaPredicted RBP11.45□□□□□ -0.58
SSH1-203ENST00000546433 COL5A2P05997 1499 aaPredicted RBP11.45□□□□□ -0.58
SSH1-203ENST00000546433 A0A1W2PQ27 194 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 A0A1W2PQ64 194 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 A0A1W2PQD8 194 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 PRAMEF22A3QJZ6 481 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 RGL2O15211 777 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 PPFIA4O75335 1185 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 OR52Z1P0C646 297 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 SCG2P13521 617 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 CRKP46108 304 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 WRNIP1Q96S55 665 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 CUEDC2Q9H467 287 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 PI4KBQ9UBF8 816 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 SAR1BQ9Y6B6 198 aa11.45□□□□□ -0.58
SSH1-203ENST00000546433 STAT1P42224 750 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 RRAGAQ7L523 313 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 MIER3Q7Z3K6 550 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 NEK8Q86SG6 692 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 NELFCDQ8IXH7 590 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 BLZF1Q9H2G9 400 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 METTL14Q9HCE5 456 aaKnown RBP11.44□□□□□ -0.58
SSH1-203ENST00000546433 LRFN2Q9ULH4 789 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 USP17L12C9JPN9 530 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 USP17L21D6R901 530 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 HOXA7P31268 230 aaPredicted RBP11.44□□□□□ -0.58
SSH1-203ENST00000546433 TPD52P55327 224 aaPredicted RBP11.44□□□□□ -0.58
SSH1-203ENST00000546433 PTH1RQ03431 593 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 FAM47AQ5JRC9 791 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 CACNA2D3Q8IZS8 1091 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 P3H4Q92791 437 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 MLXIPQ9HAP2 919 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 CRCPO75575 148 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 ARHGEF16Q5VV41 709 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 RSBN1LQ6PCB5 846 aaPredicted RBP11.44□□□□□ -0.58
SSH1-203ENST00000546433 PPP1R21Q6ZMI0 780 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 KRBA2Q6ZNG9 492 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 GPBP1Q86WP2 473 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 LSM14BQ9BX40 385 aaKnown RBP11.44□□□□□ -0.58
SSH1-203ENST00000546433 FBXO40Q9UH90 709 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 TNKSO95271 1327 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 CCDC105Q8IYK2 499 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 GRK7Q8WTQ7 553 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 TPCN1Q9ULQ1 816 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 HYOU1Q9Y4L1 999 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 PALM3A6NDB9 673 aaPredicted RBP11.44□□□□□ -0.58
SSH1-203ENST00000546433 DDX39AO00148 427 aaKnown RBP11.44□□□□□ -0.58
SSH1-203ENST00000546433 GBP1P32455 592 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 TRAPPC10P48553 1259 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 SCARF1Q14162 830 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 STRIP1Q5VSL9 837 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 HHATQ5VTY9 493 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 PLEKHF1Q96S99 279 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 NDUFB9Q9Y6M9 179 aa11.44□□□□□ -0.58
SSH1-203ENST00000546433 USP17L5A8MUK1 530 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 ASNSP08243 561 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 RASA3Q14644 834 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 PSTPIP2Q9H939 334 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 CCDC160A6NGH7 325 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 PRPF6O94906 941 aaKnown RBP11.43□□□□□ -0.58
SSH1-203ENST00000546433 CDC25BP30305 580 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 NEDD9Q14511 834 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 TYW1BQ6NUM6 668 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 TRMT44Q8IYL2 757 aaKnown RBP11.43□□□□□ -0.58
SSH1-203ENST00000546433 TRMT2AQ8IZ69 625 aaKnown RBP11.43□□□□□ -0.58
SSH1-203ENST00000546433 GPC2Q8N158 579 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 PNMA1Q8ND90 353 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 TBC1D31Q96DN5 1066 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 USP28Q96RU2 1077 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 HOXC10Q9NYD6 342 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 TBC1D7Q9P0N9 293 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 GPSM2P81274 684 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 SPATA1Q5VX52 437 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 KLHL7Q8IXQ5 586 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 NSMCE1Q8WV22 266 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 PPP2R3CQ969Q6 453 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 ZBED2Q9BTP6 218 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 MIS12Q9H081 205 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 ROBO1Q9Y6N7 1651 aa11.43□□□□□ -0.58
SSH1-203ENST00000546433 MANSC4A6NHS7 340 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms