RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ENTPD3O75355 529 aa13.52□□□□□ -0.25
CCDC38-202ENST00000546386 FANCCQ00597 558 aa13.52□□□□□ -0.25
CCDC38-202ENST00000546386 E2F4Q16254 413 aa13.52□□□□□ -0.25
CCDC38-202ENST00000546386 IQUBQ8NA54 791 aa13.52□□□□□ -0.25
CCDC38-202ENST00000546386 TSC1Q92574 1164 aa13.52□□□□□ -0.25
CCDC38-202ENST00000546386 CUL5Q93034 780 aa13.52□□□□□ -0.25
CCDC38-202ENST00000546386 WNK4Q96J92 1243 aa13.52□□□□□ -0.25
CCDC38-202ENST00000546386 PES1O00541 588 aaKnown RBP13.51□□□□□ -0.25
CCDC38-202ENST00000546386 ECM2O94769 699 aaPredicted RBP13.51□□□□□ -0.25
CCDC38-202ENST00000546386 CLCN1P35523 988 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 CCT6AP40227 531 aaKnown RBP13.51□□□□□ -0.25
CCDC38-202ENST00000546386 GPATCH4Q5T3I0 446 aaKnown RBP13.51□□□□□ -0.25
CCDC38-202ENST00000546386 PDXDC2PQ6P474 469 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 CABP7Q86V35 215 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
CCDC38-202ENST00000546386 GLIS3Q8NEA6 775 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 TIGD1Q96MW7 591 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 NYAP2Q9P242 653 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 USP27XA6NNY8 438 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 MEIS2O14770 477 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 CHMP2AO43633 222 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 FCER1AP12319 257 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 UBASH3AP57075 661 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 SYDE2Q5VT97 1194 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 KRT25Q7Z3Z0 450 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 CCDC12Q8WUD4 166 aaPredicted RBP13.51□□□□□ -0.25
CCDC38-202ENST00000546386 SGIP1Q9BQI5 828 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 MRIQ9BWK5 157 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 DISC1Q9NRI5 854 aa13.51□□□□□ -0.25
CCDC38-202ENST00000546386 DDX25Q9UHL0 483 aaKnown RBP13.51□□□□□ -0.25
CCDC38-202ENST00000546386 QSER1Q2KHR3 1735 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 NPHP3-ACAD11A0A0J9YXS1 232 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 OPLAHO14841 1288 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 CAP2P40123 477 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 PMS1P54277 932 aaKnown RBP13.5□□□□□ -0.25
CCDC38-202ENST00000546386 MYL5Q02045 173 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 CYP4A11Q02928 519 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 MCM6Q14566 821 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 FBXO11Q86XK2 927 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 SH2D3AQ9BRG2 576 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 MMTAG2Q9BU76 263 aaKnown RBP13.5□□□□□ -0.25
CCDC38-202ENST00000546386 FAM237AA0A1B0GTK4 181 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 STAT2P52630 851 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 FKBP1AP62942 108 aaKnown RBP13.5□□□□□ -0.25
CCDC38-202ENST00000546386 MTMR2Q13614 643 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 MORC3Q14149 939 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 TANGO6Q9C0B7 1094 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 LRWD1Q9UFC0 647 aa13.5□□□□□ -0.25
CCDC38-202ENST00000546386 FOCADQ5VW36 1801 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 PLIN4Q96Q06 1357 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 FAM86B1E9PN63 330 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 DDX39AO00148 427 aaKnown RBP13.49□□□□□ -0.25
CCDC38-202ENST00000546386 ZBTB39O15060 712 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 TEX33O43247 280 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 FAM86B2P0C5J1 330 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 IDEP14735 1019 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 SARSP49591 514 aaKnown RBP13.49□□□□□ -0.25
CCDC38-202ENST00000546386 SPP2Q13103 211 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 LRRC41Q15345 812 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 HAS1Q92839 578 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 C16orf45Q96MC5 204 aaPredicted RBP13.49□□□□□ -0.25
CCDC38-202ENST00000546386 TMX1Q9H3N1 280 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 RIC8AQ9NPQ8 531 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 TRAPPC10P48553 1259 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 HIRAP54198 1017 aaPredicted RBP13.49□□□□□ -0.25
CCDC38-202ENST00000546386 KIF4BQ2VIQ3 1234 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 AGBL3Q8NEM8 1001 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 MKL1Q969V6 931 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 TEPSINQ96N21 525 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 ZHX3Q9H4I2 956 aa13.49□□□□□ -0.25
CCDC38-202ENST00000546386 PRCPP42785 496 aa13.48□□□□□ -0.25
CCDC38-202ENST00000546386 MRPL12P52815 198 aaKnown RBP13.48□□□□□ -0.25
CCDC38-202ENST00000546386 ADKP55263 362 aaKnown RBP13.48□□□□□ -0.25
CCDC38-202ENST00000546386 MOB2Q70IA6 237 aa13.48□□□□□ -0.25
CCDC38-202ENST00000546386 SNX29Q8TEQ0 813 aa13.48□□□□□ -0.25
CCDC38-202ENST00000546386 ANO3Q9BYT9 981 aa13.48□□□□□ -0.25
CCDC38-202ENST00000546386 SLC39A2Q9NP94 309 aa13.48□□□□□ -0.25
CCDC38-202ENST00000546386 INTS13Q9NVM9 706 aa13.48□□□□□ -0.25
CCDC38-202ENST00000546386 GGA3Q9NZ52 723 aa13.48□□□□□ -0.25
CCDC38-202ENST00000546386 TXLNAP40222 546 aa13.48□□□□□ -0.25
CCDC38-202ENST00000546386 NOLC1Q14978 699 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC38-202ENST00000546386 DAGLBQ8NCG7 672 aa13.48□□□□□ -0.25
CCDC38-202ENST00000546386 ZNF592Q92610 1267 aa13.48□□□□□ -0.25
CCDC38-202ENST00000546386 AMNQ9BXJ7 453 aa13.48□□□□□ -0.25
CCDC38-202ENST00000546386 ARHGEF10LQ9HCE6 1279 aa13.48□□□□□ -0.25
CCDC38-202ENST00000546386 RAVER2Q9HCJ3 691 aaKnown RBP13.48□□□□□ -0.25
CCDC38-202ENST00000546386 HOOK1Q9UJC3 728 aaKnown RBP13.48□□□□□ -0.25
CCDC38-202ENST00000546386 MYO3BQ8WXR4 1341 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 E9PMD0 336 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 RPN1P04843 607 aaKnown RBP13.47□□□□□ -0.25
CCDC38-202ENST00000546386 LONP1P36776 959 aaKnown RBP13.47□□□□□ -0.25
CCDC38-202ENST00000546386 ASIC1P78348 528 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 TNIP1Q15025 636 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 KMT5BQ4FZB7 885 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 WRNIP1Q96S55 665 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 VPS16Q9H269 839 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 BMP2KQ9NSY1 1161 aaPredicted RBP13.47□□□□□ -0.25
CCDC38-202ENST00000546386 HERC5Q9UII4 1024 aaKnown RBP13.47□□□□□ -0.25
CCDC38-202ENST00000546386 ATRNL1Q5VV63 1379 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 POTEB3A0JP26 581 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms