RNA–Protein interactions for RNA: ENST00000546146.5

LDHC-210, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 701 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-210ENST00000546146 RASGRP4Q8TDF6 673 aa11.75□□□□□ -0.53
LDHC-210ENST00000546146 ZC3H15Q8WU90 426 aaKnown RBP11.75□□□□□ -0.53
LDHC-210ENST00000546146 KIFC2Q96AC6 838 aa11.75□□□□□ -0.53
LDHC-210ENST00000546146 CLIC6Q96NY7 704 aa11.75□□□□□ -0.53
LDHC-210ENST00000546146 WRNIP1Q96S55 665 aa11.75□□□□□ -0.53
LDHC-210ENST00000546146 WDR18Q9BV38 432 aa11.75□□□□□ -0.53
LDHC-210ENST00000546146 USP25Q9UHP3 1055 aa11.75□□□□□ -0.53
LDHC-210ENST00000546146 VWA3AA6NCI4 1184 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 IQCA1LA6NCM1 817 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 C19orf81C9J6K1 198 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 MARCH6O60337 910 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 CCNT1O60563 726 aaKnown RBP11.74□□□□□ -0.53
LDHC-210ENST00000546146 FDX1P10109 184 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 LONP1P36776 959 aaKnown RBP11.74□□□□□ -0.53
LDHC-210ENST00000546146 PRPHP41219 470 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 HIRAP54198 1017 aaPredicted RBP11.74□□□□□ -0.53
LDHC-210ENST00000546146 TYRO3Q06418 890 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 AP3B2Q13367 1082 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 RBM43Q6ZSC3 357 aaKnown RBP11.74□□□□□ -0.53
LDHC-210ENST00000546146 ELOA2Q8IYF1 753 aaPredicted RBP11.74□□□□□ -0.53
LDHC-210ENST00000546146 PRPF38AQ8NAV1 312 aaKnown RBP11.74□□□□□ -0.53
LDHC-210ENST00000546146 TBCKQ8TEA7 893 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 KHSRPQ92945 711 aaKnown RBP eCLIP11.74□□□□□ -0.53
LDHC-210ENST00000546146 MFRPQ9BY79 579 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 NAT10Q9H0A0 1025 aaKnown RBP11.74□□□□□ -0.53
LDHC-210ENST00000546146 CSRNP2Q9H175 543 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 RBSNQ9H1K0 784 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 EHMT1Q9H9B1 1298 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 ANO10Q9NW15 660 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 TMOD4Q9NZQ9 345 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 HPSEQ9Y251 543 aa11.74□□□□□ -0.53
LDHC-210ENST00000546146 MRPL11Q9Y3B7 192 aaKnown RBP11.74□□□□□ -0.53
LDHC-210ENST00000546146 BAZ2BQ9UIF8 2168 aaKnown RBP11.74□□□□□ -0.53
LDHC-210ENST00000546146 SPDYE3A6NKU9 549 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 NEMFO60524 1076 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 PPP1R11O60927 126 aaPredicted RBP11.73□□□□□ -0.53
LDHC-210ENST00000546146 XRCC6P12956 609 aaKnown RBP eCLIP11.73□□□□□ -0.53
LDHC-210ENST00000546146 GCFC2P16383 781 aaKnown RBP11.73□□□□□ -0.53
LDHC-210ENST00000546146 INPP5BP32019 993 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 EPHX2P34913 555 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 STX1AQ16623 288 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 TMEM266Q2M3C6 531 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 USH1GQ495M9 461 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 NOM1Q5C9Z4 860 aaKnown RBP11.73□□□□□ -0.53
LDHC-210ENST00000546146 CEP57L1Q8IYX8 460 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 ZNF280CQ8ND82 737 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 TMC2Q8TDI7 906 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 RAB34Q9BZG1 259 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 TMEM260Q9NX78 707 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 CCDC39Q9UFE4 941 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 CSADQ9Y600 493 aa11.73□□□□□ -0.53
LDHC-210ENST00000546146 SBF1O95248 1867 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 ABCB11O95342 1321 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 GLTPD2A6NH11 291 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 POLR2DO15514 142 aaKnown RBP11.72□□□□□ -0.53
LDHC-210ENST00000546146 ZBED4O75132 1171 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 OR52Z1P0C646 297 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 PTPRAP18433 802 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 IREB2P48200 963 aaKnown RBP11.72□□□□□ -0.53
LDHC-210ENST00000546146 USP11P51784 963 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 BACE1P56817 501 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 SNAP25P60880 206 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 MAP3K9P80192 1104 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 SPP2Q13103 211 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 PRAMEF18Q5VWM3 479 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 CCDC174Q6PII3 467 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 KRBA2Q6ZNG9 492 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 KRT26Q7Z3Y9 468 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 PNMA8AQ86V59 439 aaPredicted RBP11.72□□□□□ -0.53
LDHC-210ENST00000546146 IQUBQ8NA54 791 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 RNF214Q8ND24 703 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 RASSF8Q8NHQ8 419 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 RBM46Q8TBY0 533 aaKnown RBP11.72□□□□□ -0.53
LDHC-210ENST00000546146 KLRG1Q96E93 195 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 SLF1Q9BQI6 1058 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 TANGO6Q9C0B7 1094 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 RANBP17Q9H2T7 1088 aaKnown RBP11.72□□□□□ -0.53
LDHC-210ENST00000546146 KIAA1468Q9P260 1216 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 ZHX2Q9Y6X8 837 aa11.72□□□□□ -0.53
LDHC-210ENST00000546146 C2orf72A6NCS6 295 aa11.71□□□□□ -0.53
LDHC-210ENST00000546146 GCOM1H8Y6P7 765 aaPredicted RBP11.71□□□□□ -0.53
LDHC-210ENST00000546146 SMC2O95347 1197 aa11.71□□□□□ -0.53
LDHC-210ENST00000546146 POLR2MP0CAP2 368 aa11.71□□□□□ -0.53
LDHC-210ENST00000546146 UBA7P41226 1012 aa11.71□□□□□ -0.53
LDHC-210ENST00000546146 CLK2P49760 499 aaKnown RBP11.71□□□□□ -0.53
LDHC-210ENST00000546146 MTMR2Q13614 643 aa11.71□□□□□ -0.53
LDHC-210ENST00000546146 CALCRLQ16602 461 aa11.71□□□□□ -0.53
LDHC-210ENST00000546146 UBE2SQ16763 222 aa11.71□□□□□ -0.53
LDHC-210ENST00000546146 KIAA1755Q5JYT7 1200 aa11.71□□□□□ -0.53
LDHC-210ENST00000546146 SPECC1Q5M775 1068 aa11.71□□□□□ -0.53
LDHC-210ENST00000546146 NOL9Q5SY16 702 aaKnown RBP11.71□□□□□ -0.53
LDHC-210ENST00000546146 PPP4R3AQ6IN85 833 aa11.71□□□□□ -0.53
LDHC-210ENST00000546146 MCF2L2Q86YR7 1114 aa11.71□□□□□ -0.53
LDHC-210ENST00000546146 ZKSCAN4Q969J2 545 aaPredicted RBP11.71□□□□□ -0.53
LDHC-210ENST00000546146 AK8Q96MA6 479 aa11.71□□□□□ -0.53
LDHC-210ENST00000546146 FUCA2Q9BTY2 467 aa11.71□□□□□ -0.53
LDHC-210ENST00000546146 ADAMTS3O15072 1205 aa11.7□□□□□ -0.54
LDHC-210ENST00000546146 FLOT1O75955 427 aa11.7□□□□□ -0.54
LDHC-210ENST00000546146 PRKG1Q13976 671 aa11.7□□□□□ -0.54
LDHC-210ENST00000546146 TTLL12Q14166 644 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms