RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 STIM1Q13586 685 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 KCNB1Q14721 858 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 CTC1Q2NKJ3 1217 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 BEND6Q5SZJ8 279 aaPredicted RBP7.28□□□□□ -1.24
SNHG1-225ENST00000545920 CCDC70Q6NSX1 233 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 FOXR2Q6PJQ5 311 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 LEKR1Q6ZMV7 388 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 CATIPQ7Z7H3 387 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 IQCA1Q86XH1 822 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 SIX5Q8N196 739 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 GOLGA6L1Q8N7Z2 621 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 CCDC148Q8NFR7 591 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 PHKBQ93100 1093 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 WDR24Q96S15 920 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 PHF20Q9BVI0 1012 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 BRIP1Q9BX63 1249 aa7.28□□□□□ -1.24
SNHG1-225ENST00000545920 SOS2Q07890 1332 aaPredicted RBP7.27□□□□□ -1.24
SNHG1-225ENST00000545920 A0A087WWV3 80 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 PSMD14O00487 310 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 ORC4O43929 436 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 MBD4O95243 580 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 ACTN2P35609 894 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 AARSP49588 968 aaKnown RBP eCLIP7.27□□□□□ -1.25
SNHG1-225ENST00000545920 SMCPP49901 116 aaPredicted RBP7.27□□□□□ -1.25
SNHG1-225ENST00000545920 GNAQP50148 359 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 ATP1A2P50993 1020 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 CDK17Q00537 523 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 PAK1Q13153 545 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 SEC23AQ15436 765 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 KIF4BQ2VIQ3 1234 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 CCDC152Q4G0S7 254 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 COBLL1Q53SF7 1204 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 TOGARAM2Q6ZUX3 1019 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 FAM114A1Q8IWE2 563 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 CCDC170Q8IYT3 715 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 ZNF34Q8IZ26 560 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 CCDC47Q96A33 483 aaKnown RBP7.27□□□□□ -1.25
SNHG1-225ENST00000545920 DHX58Q96C10 678 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 FAM89AQ96GI7 184 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 PAGE5Q96GU1 130 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 AIFM3Q96NN9 605 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 TSGA10Q9BZW7 698 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 CSRNP2Q9H175 543 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 UNC93B1Q9H1C4 597 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 THAP9Q9H5L6 903 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 GREM2Q9H772 168 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 EPB41L4AQ9HCS5 686 aaPredicted RBP7.27□□□□□ -1.25
SNHG1-225ENST00000545920 DNAAF2Q9NVR5 837 aaKnown RBP7.27□□□□□ -1.25
SNHG1-225ENST00000545920 GMPR2Q9P2T1 348 aaKnown RBP7.27□□□□□ -1.25
SNHG1-225ENST00000545920 L1RE1Q9UN81 338 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 NOD1Q9Y239 953 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 ABCB11O95342 1321 aa7.27□□□□□ -1.25
SNHG1-225ENST00000545920 AXIN1O15169 862 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 WIPF1O43516 503 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 IPO7O95373 1038 aaKnown RBP7.26□□□□□ -1.25
SNHG1-225ENST00000545920 KIF5BP33176 963 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 CYLC1P35663 651 aaPredicted RBP7.26□□□□□ -1.25
SNHG1-225ENST00000545920 PHKA1P46020 1223 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 HNRNPH2P55795 449 aaKnown RBP7.26□□□□□ -1.25
SNHG1-225ENST00000545920 PPARAQ07869 468 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 RBL2Q08999 1139 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 ZSCAN26Q16670 478 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 FIGNQ5HY92 759 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 TTC38Q5R3I4 469 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 ZNF658Q5TYW1 1059 aaPredicted RBP7.26□□□□□ -1.25
SNHG1-225ENST00000545920 PTCRAQ6ISU1 281 aaPredicted RBP7.26□□□□□ -1.25
SNHG1-225ENST00000545920 CERS3Q8IU89 383 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 CYP4X1Q8N118 509 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 CCDC155Q8N6L0 562 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 MAGEB6Q8N7X4 407 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 OR8K1Q8NGG5 319 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 CCDC85AQ96PX6 553 aaPredicted RBP7.26□□□□□ -1.25
SNHG1-225ENST00000545920 ZSCAN10Q96SZ4 725 aaPredicted RBP7.26□□□□□ -1.25
SNHG1-225ENST00000545920 ABHD10Q9NUJ1 306 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 TRMT112Q9UI30 125 aaKnown RBP7.26□□□□□ -1.25
SNHG1-225ENST00000545920 ADAM21Q9UKJ8 722 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 PCDHB6Q9Y5E3 794 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 SLC4A4Q9Y6R1 1079 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 AKAP11Q9UKA4 1901 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 ZNF804BA4D1E1 1349 aa7.26□□□□□ -1.25
SNHG1-225ENST00000545920 DOCK2Q92608 1830 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 A0A1W2PQJ5 194 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 BICDL2A1A5D9 508 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 N4BP3O15049 544 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 NPHP1O15259 732 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 FANCGO15287 622 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 KRT86O43790 486 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 SASH3O75995 380 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 GYPCP04921 128 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 CYP19A1P11511 503 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-225ENST00000545920 PRLRP16471 622 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 IGHMBP2P38935 993 aaKnown RBP7.25□□□□□ -1.25
SNHG1-225ENST00000545920 PRPHP41219 470 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 DNM2P50570 870 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 COPB1P53618 953 aaKnown RBP7.25□□□□□ -1.25
SNHG1-225ENST00000545920 ADKP55263 362 aaKnown RBP7.25□□□□□ -1.25
SNHG1-225ENST00000545920 NFX1Q12986 1120 aaKnown RBP7.25□□□□□ -1.25
SNHG1-225ENST00000545920 RASGRF1Q13972 1273 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 UBE4AQ14139 1066 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 CHRNA2Q15822 529 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms