RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 SNRNP48Q6IEG0 339 aaKnown RBP11.88□□□□□ -0.51
LINC00939-203ENST00000545784 SHCBP1Q8NEM2 672 aa11.88□□□□□ -0.51
LINC00939-203ENST00000545784 FAM200AQ8TCP9 573 aa11.88□□□□□ -0.51
LINC00939-203ENST00000545784 SCAND2PQ9GZW5 306 aaPredicted RBP11.88□□□□□ -0.51
LINC00939-203ENST00000545784 EFCC1Q9HA90 598 aa11.88□□□□□ -0.51
LINC00939-203ENST00000545784 A0A0G2JMZ2 1700 aa11.88□□□□□ -0.51
LINC00939-203ENST00000545784 PRPF3O43395 683 aaKnown RBP11.88□□□□□ -0.51
LINC00939-203ENST00000545784 SLC25A27O95847 323 aa11.88□□□□□ -0.51
LINC00939-203ENST00000545784 CTCFP49711 727 aaPredicted RBP11.88□□□□□ -0.51
LINC00939-203ENST00000545784 PKN1Q16512 942 aa11.88□□□□□ -0.51
LINC00939-203ENST00000545784 CCDC83Q8IWF9 413 aa11.88□□□□□ -0.51
LINC00939-203ENST00000545784 PHKBQ93100 1093 aa11.88□□□□□ -0.51
LINC00939-203ENST00000545784 RRP36Q96EU6 259 aaKnown RBP11.88□□□□□ -0.51
LINC00939-203ENST00000545784 TRIM47Q96LD4 638 aa11.88□□□□□ -0.51
LINC00939-203ENST00000545784 DHX16O60231 1041 aaKnown RBP11.87□□□□□ -0.51
LINC00939-203ENST00000545784 DTNBO60941 627 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 CCNA1P78396 465 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 DNM1Q05193 864 aaKnown RBP11.87□□□□□ -0.51
LINC00939-203ENST00000545784 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC00939-203ENST00000545784 KIAA1524Q8TCG1 905 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 CLEC4DQ8WXI8 215 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 NUP62CLQ9H1M0 184 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 CCPG1Q9ULG6 757 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 CTDP1Q9Y5B0 961 aaPredicted RBP11.87□□□□□ -0.51
LINC00939-203ENST00000545784 BAZ2BQ9UIF8 2168 aaKnown RBP11.87□□□□□ -0.51
LINC00939-203ENST00000545784 PPFIA3O75145 1194 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
LINC00939-203ENST00000545784 MAPK4P31152 587 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 PSMC4P43686 418 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 LBX1P52954 281 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 TKFCQ3LXA3 575 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 MUM1L1Q5H9M0 696 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 FBXO11Q86XK2 927 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 HOMER1Q86YM7 354 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 CD99L2Q8TCZ2 262 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 AMNQ9BXJ7 453 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 MROH8Q9H579 483 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 TTC12Q9H892 705 aaPredicted RBP11.87□□□□□ -0.51
LINC00939-203ENST00000545784 DDX19AQ9NUU7 478 aaKnown RBP11.87□□□□□ -0.51
LINC00939-203ENST00000545784 GJD2Q9UKL4 321 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 PNMA2Q9UL42 364 aa11.87□□□□□ -0.51
LINC00939-203ENST00000545784 VPS37CA5D8V6 355 aaPredicted RBP11.86□□□□□ -0.51
LINC00939-203ENST00000545784 OPLAHO14841 1288 aa11.86□□□□□ -0.51
LINC00939-203ENST00000545784 FDPSP14324 419 aaKnown RBP11.86□□□□□ -0.51
LINC00939-203ENST00000545784 COPB2P35606 906 aa11.86□□□□□ -0.51
LINC00939-203ENST00000545784 MORN1Q5T089 497 aa11.86□□□□□ -0.51
LINC00939-203ENST00000545784 LARP1BQ659C4 914 aaKnown RBP11.86□□□□□ -0.51
LINC00939-203ENST00000545784 GPR142Q7Z601 462 aa11.86□□□□□ -0.51
LINC00939-203ENST00000545784 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.86□□□□□ -0.51
LINC00939-203ENST00000545784 NCAPG2Q86XI2 1143 aa11.86□□□□□ -0.51
LINC00939-203ENST00000545784 NSUN7Q8NE18 718 aaKnown RBP11.86□□□□□ -0.51
LINC00939-203ENST00000545784 TRERF1Q96PN7 1200 aa11.86□□□□□ -0.51
LINC00939-203ENST00000545784 SLC26A6Q9BXS9 759 aa11.86□□□□□ -0.51
LINC00939-203ENST00000545784 RNF26Q9BY78 433 aaPredicted RBP11.86□□□□□ -0.51
LINC00939-203ENST00000545784 PCDHA1Q9Y5I3 950 aa11.86□□□□□ -0.51
LINC00939-203ENST00000545784 CPLX1O14810 134 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 ALAS1P13196 640 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 PFKFB3Q16875 520 aaPredicted RBP11.85□□□□□ -0.51
LINC00939-203ENST00000545784 PLEKHH3Q7Z736 793 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 CHST13Q8NET6 341 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 USP6NLQ92738 828 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 COA7Q96BR5 231 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 SHISA4Q96DD7 197 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 ERO1AQ96HE7 468 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 RNF146Q9NTX7 359 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 GOLGA6L4A6NEF3 574 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 JAK2O60674 1132 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 ECM2O94769 699 aaPredicted RBP11.85□□□□□ -0.51
LINC00939-203ENST00000545784 PTPREP23469 700 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 FCGRTP55899 365 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 SSRP1Q08945 709 aaKnown RBP11.85□□□□□ -0.51
LINC00939-203ENST00000545784 USH1GQ495M9 461 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 TYW1BQ6NUM6 668 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 ABRAQ8N0Z2 381 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 RGS22Q8NE09 1264 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 SMARCC2Q8TAQ2 1214 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 TBC1D5Q92609 795 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 LLPHQ9BRT6 129 aaKnown RBP11.85□□□□□ -0.51
LINC00939-203ENST00000545784 HOMER2Q9NSB8 354 aa11.85□□□□□ -0.51
LINC00939-203ENST00000545784 ABCB11O95342 1321 aa11.84□□□□□ -0.51
LINC00939-203ENST00000545784 NFIBO00712 420 aa11.84□□□□□ -0.51
LINC00939-203ENST00000545784 STRNO43815 780 aa11.84□□□□□ -0.51
LINC00939-203ENST00000545784 CDKL5O76039 1030 aa11.84□□□□□ -0.51
LINC00939-203ENST00000545784 PLCB2Q00722 1185 aa11.84□□□□□ -0.51
LINC00939-203ENST00000545784 GRB14Q14449 540 aa11.84□□□□□ -0.51
LINC00939-203ENST00000545784 WWC2Q6AWC2 1192 aa11.84□□□□□ -0.51
LINC00939-203ENST00000545784 CPLX2Q6PUV4 134 aaKnown RBP11.84□□□□□ -0.51
LINC00939-203ENST00000545784 GPKOWQ92917 476 aaPredicted RBP eCLIP11.84□□□□□ -0.51
LINC00939-203ENST00000545784 BARHL2Q9NY43 387 aa11.84□□□□□ -0.51
LINC00939-203ENST00000545784 SEC63Q9UGP8 760 aaKnown RBP11.84□□□□□ -0.51
LINC00939-203ENST00000545784 FBXO40Q9UH90 709 aa11.84□□□□□ -0.51
LINC00939-203ENST00000545784 COL11A1P12107 1806 aaPredicted RBP11.84□□□□□ -0.51
LINC00939-203ENST00000545784 SMCHD1A6NHR9 2005 aa11.84□□□□□ -0.51
LINC00939-203ENST00000545784 SLC15A5A6NIM6 579 aa11.83□□□□□ -0.51
LINC00939-203ENST00000545784 STXBP3O00186 592 aa11.83□□□□□ -0.51
LINC00939-203ENST00000545784 COBLO75128 1261 aa11.83□□□□□ -0.51
LINC00939-203ENST00000545784 SCG2P13521 617 aa11.83□□□□□ -0.51
LINC00939-203ENST00000545784 GHRHRQ02643 423 aa11.83□□□□□ -0.51
LINC00939-203ENST00000545784 KIF22Q14807 665 aa11.83□□□□□ -0.51
LINC00939-203ENST00000545784 SYCP1Q15431 976 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms