RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ZC3H12DA2A288 527 aaKnown RBP7.81□□□□□ -1.16
SNHG1-224ENST00000545688 BUB1BO60566 1050 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-224ENST00000545688 SSBP05455 408 aaKnown RBP eCLIP7.81□□□□□ -1.16
SNHG1-224ENST00000545688 PAMP19021 973 aa7.81□□□□□ -1.16
SNHG1-224ENST00000545688 AFF3P51826 1226 aaKnown RBP7.81□□□□□ -1.16
SNHG1-224ENST00000545688 ZNF143P52747 638 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-224ENST00000545688 CNKSR3Q6P9H4 555 aa7.81□□□□□ -1.16
SNHG1-224ENST00000545688 C6orf15Q6UXA7 325 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-224ENST00000545688 FAM129CQ86XR2 697 aa7.81□□□□□ -1.16
SNHG1-224ENST00000545688 VPS37DQ86XT2 251 aa7.81□□□□□ -1.16
SNHG1-224ENST00000545688 BVESQ8NE79 360 aa7.81□□□□□ -1.16
SNHG1-224ENST00000545688 ACTR10Q9NZ32 417 aa7.81□□□□□ -1.16
SNHG1-224ENST00000545688 NPHP3-ACAD11A0A0J9YXS1 232 aa7.8□□□□□ -1.16
SNHG1-224ENST00000545688 F8W031 263 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-224ENST00000545688 PPP1R11O60927 126 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-224ENST00000545688 GLI4P10075 376 aa7.8□□□□□ -1.16
SNHG1-224ENST00000545688 NAT2P11245 290 aa7.8□□□□□ -1.16
SNHG1-224ENST00000545688 BMP7P18075 431 aa7.8□□□□□ -1.16
SNHG1-224ENST00000545688 SCRN1Q12765 414 aa7.8□□□□□ -1.16
SNHG1-224ENST00000545688 LARP1BQ659C4 914 aaKnown RBP7.8□□□□□ -1.16
SNHG1-224ENST00000545688 LZTR1Q8N653 840 aa7.8□□□□□ -1.16
SNHG1-224ENST00000545688 PPP1R14AQ96A00 147 aa7.8□□□□□ -1.16
SNHG1-224ENST00000545688 RXFP1Q9HBX9 757 aa7.8□□□□□ -1.16
SNHG1-224ENST00000545688 CLEC1BQ9P126 229 aa7.8□□□□□ -1.16
SNHG1-224ENST00000545688 GULP1Q9UBP9 304 aa7.8□□□□□ -1.16
SNHG1-224ENST00000545688 KRTAP9-7A8MTY7 169 aa7.79□□□□□ -1.16
SNHG1-224ENST00000545688 B2RBV5 119 aa7.79□□□□□ -1.16
SNHG1-224ENST00000545688 TRIM13O60858 407 aa7.79□□□□□ -1.16
SNHG1-224ENST00000545688 FBLN1P23142 703 aa7.79□□□□□ -1.16
SNHG1-224ENST00000545688 IGFBP6P24592 240 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-224ENST00000545688 PRR5P85299 388 aa7.79□□□□□ -1.16
SNHG1-224ENST00000545688 TNNI3KQ59H18 835 aa7.79□□□□□ -1.16
SNHG1-224ENST00000545688 POMZP3Q6PJE2 187 aa7.79□□□□□ -1.16
SNHG1-224ENST00000545688 TRIM59Q8IWR1 403 aa7.79□□□□□ -1.16
SNHG1-224ENST00000545688 CRACR2BQ8N4Y2 399 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-224ENST00000545688 MTA3Q9BTC8 594 aa7.79□□□□□ -1.16
SNHG1-224ENST00000545688 GPRC5CQ9NQ84 441 aa7.79□□□□□ -1.16
SNHG1-224ENST00000545688 DBR1Q9UK59 544 aaKnown RBP7.79□□□□□ -1.16
SNHG1-224ENST00000545688 NOP56O00567 594 aaKnown RBP7.78□□□□□ -1.16
SNHG1-224ENST00000545688 PLS3P13797 630 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 ETFBP38117 255 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 LIMS1P48059 325 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 GNL2Q13823 731 aaKnown RBP7.78□□□□□ -1.16
SNHG1-224ENST00000545688 VMACQ2NL98 169 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 MBLAC2Q68D91 279 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 GTF2IRD2BQ6EKJ0 949 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 LILRA6Q6PI73 481 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 GTF2IRD2Q86UP8 949 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 CABP7Q86V35 215 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 COPS5Q92905 334 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 MRGPRX3Q96LB0 322 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.78□□□□□ -1.161e-17■■■□□ 16.6
SNHG1-224ENST00000545688 TINF2Q9BSI4 451 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 ZCCHC4Q9H5U6 513 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 PARD6AQ9NPB6 346 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 PRKAG3Q9UGI9 489 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 RAPGEFL1Q9UHV5 662 aa7.78□□□□□ -1.16
SNHG1-224ENST00000545688 TRBV23OR9-2A0A075B6M9 112 aa7.77□□□□□ -1.17
SNHG1-224ENST00000545688 C7orf72A4D263 438 aa7.77□□□□□ -1.17
SNHG1-224ENST00000545688 FGRP09769 529 aa7.77□□□□□ -1.17
SNHG1-224ENST00000545688 PFKLP17858 780 aa7.77□□□□□ -1.17
SNHG1-224ENST00000545688 HOXA5P20719 270 aa7.77□□□□□ -1.17
SNHG1-224ENST00000545688 FAM178BQ8IXR5 827 aa7.77□□□□□ -1.17
SNHG1-224ENST00000545688 MARCH10Q8NA82 808 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-224ENST00000545688 PWWP2AQ96N64 755 aa7.77□□□□□ -1.17
SNHG1-224ENST00000545688 KCNC2Q96PR1 638 aa7.77□□□□□ -1.17
SNHG1-224ENST00000545688 KRTAP4-7Q9BYR0 210 aa7.77□□□□□ -1.17
SNHG1-224ENST00000545688 NPHS1O60500 1241 aa7.76□□□□□ -1.17
SNHG1-224ENST00000545688 THBDP07204 575 aa7.76□□□□□ -1.17
SNHG1-224ENST00000545688 CYP4F3Q08477 520 aa7.76□□□□□ -1.17
SNHG1-224ENST00000545688 TARBP2Q15633 366 aaKnown RBP7.76□□□□□ -1.17
SNHG1-224ENST00000545688 MICAL1Q8TDZ2 1067 aa7.76□□□□□ -1.17
SNHG1-224ENST00000545688 NKX2-4Q9H2Z4 354 aa7.76□□□□□ -1.17
SNHG1-224ENST00000545688 BCAS3Q9H6U6 928 aa7.76□□□□□ -1.17
SNHG1-224ENST00000545688 TBX1O43435 398 aa7.75□□□□□ -1.17
SNHG1-224ENST00000545688 SUSD5O60279 629 aa7.75□□□□□ -1.17
SNHG1-224ENST00000545688 DDAH1O94760 285 aa7.75□□□□□ -1.17
SNHG1-224ENST00000545688 ATF2P15336 505 aa7.75□□□□□ -1.17
SNHG1-224ENST00000545688 MRM1Q6IN84 353 aaKnown RBP7.75□□□□□ -1.17
SNHG1-224ENST00000545688 NETO2Q8NC67 525 aa7.75□□□□□ -1.17
SNHG1-224ENST00000545688 USP33Q8TEY7 942 aa7.75□□□□□ -1.17
SNHG1-224ENST00000545688 BTN2A2Q8WVV5 523 aa7.75□□□□□ -1.17
SNHG1-224ENST00000545688 ALG3Q92685 438 aa7.75□□□□□ -1.17
SNHG1-224ENST00000545688 MMP19Q99542 508 aa7.75□□□□□ -1.17
SNHG1-224ENST00000545688 ZNF408Q9H9D4 720 aa7.75□□□□□ -1.17
SNHG1-224ENST00000545688 CYP26B1Q9NR63 512 aa7.75□□□□□ -1.17
SNHG1-224ENST00000545688 FUCA1P04066 466 aa7.74□□□□□ -1.17
SNHG1-224ENST00000545688 ITGAVP06756 1048 aa7.74□□□□□ -1.17
SNHG1-224ENST00000545688 ASGR2P07307 311 aa7.74□□□□□ -1.17
SNHG1-224ENST00000545688 MC3RP41968 323 aa7.74□□□□□ -1.17
SNHG1-224ENST00000545688 RBM25P49756 843 aaKnown RBP7.74□□□□□ -1.17
SNHG1-224ENST00000545688 ARID5AQ03989 594 aa7.74□□□□□ -1.17
SNHG1-224ENST00000545688 INF2Q27J81 1249 aa7.74□□□□□ -1.17
SNHG1-224ENST00000545688 SV2CQ496J9 727 aa7.74□□□□□ -1.17
SNHG1-224ENST00000545688 WWC2Q6AWC2 1192 aa7.74□□□□□ -1.17
SNHG1-224ENST00000545688 ZNF227Q86WZ6 799 aa7.74□□□□□ -1.17
SNHG1-224ENST00000545688 MCF2L2Q86YR7 1114 aa7.74□□□□□ -1.17
SNHG1-224ENST00000545688 FRS2Q8WU20 508 aa7.74□□□□□ -1.17
SNHG1-224ENST00000545688 TSPAN17Q96FV3 270 aa7.74□□□□□ -1.17
SNHG1-224ENST00000545688 C20orf173Q96LM9 149 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms