RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ZNF287Q9HBT7 754 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 CYLDQ9NQC7 956 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 RBPJLQ9UBG7 517 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 TMX2Q9Y320 296 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 RABGAP1Q9Y3P9 1069 aa9.15□□□□□ -0.94
SNHG1-223ENST00000545440 BACH1O14867 736 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 WDR46O15213 610 aaKnown RBP9.14□□□□□ -0.95
SNHG1-223ENST00000545440 HMGCRP04035 888 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 INHAP05111 366 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 GJB1P08034 283 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 XRCC5P13010 732 aaKnown RBP9.14□□□□□ -0.95
SNHG1-223ENST00000545440 CCL5P13501 91 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 ELNP15502 786 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 CAPN2P17655 700 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 EN2P19622 333 aaPredicted RBP9.14□□□□□ -0.95
SNHG1-223ENST00000545440 MTFR1Q15390 333 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 SWI5Q1ZZU3 235 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 IFNL3Q8IZI9 196 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 SIX5Q8N196 739 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 SHISA4Q96DD7 197 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 SEC62Q99442 399 aaKnown RBP9.14□□□□□ -0.95
SNHG1-223ENST00000545440 TANGO6Q9C0B7 1094 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 LNPKQ9C0E8 428 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 PORCNQ9H237 461 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 VCPKMTQ9H867 229 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 BIN2Q9UBW5 565 aaPredicted RBP9.14□□□□□ -0.95
SNHG1-223ENST00000545440 GJD2Q9UKL4 321 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 MTMR7Q9Y216 660 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 SMCHD1A6NHR9 2005 aa9.14□□□□□ -0.95
SNHG1-223ENST00000545440 LCTP09848 1927 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 ZMYM6O95789 1325 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 MINDY4BA8MYZ0 360 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 PEX10O60683 326 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 CNMDO75829 334 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 RGS20O76081 388 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 APPP05067 770 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 SLC3A2P08195 630 aaKnown RBP9.13□□□□□ -0.95
SNHG1-223ENST00000545440 EEF2P13639 858 aaKnown RBP9.13□□□□□ -0.95
SNHG1-223ENST00000545440 GJA8P48165 433 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 NUCB1Q02818 461 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 NNTQ13423 1086 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 COG2Q14746 738 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 GPR142Q7Z601 462 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 CHD1LQ86WJ1 897 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 SIAH1Q8IUQ4 282 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 CCAR1Q8IX12 1150 aaKnown RBP9.13□□□□□ -0.95
SNHG1-223ENST00000545440 MB21D1Q8N884 522 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 APBA2Q99767 749 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 HINFPQ9BQA5 517 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 RNF208Q9H0X6 261 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 NAPBQ9H115 298 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 OSBPL3Q9H4L5 887 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 MKNK2Q9HBH9 465 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 PAK6Q9NQU5 681 aaPredicted RBP9.13□□□□□ -0.95
SNHG1-223ENST00000545440 SYNPO2Q9UMS6 1093 aa9.13□□□□□ -0.95
SNHG1-223ENST00000545440 SUPT16HQ9Y5B9 1047 aaKnown RBP9.13□□□□□ -0.95
SNHG1-223ENST00000545440 LRRC37A2A6NM11 1700 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 IGKV6D-41A0A0C4DH26 115 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 FOXP2O15409 715 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 FLOT1O75955 427 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 IGHDP01880 384 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 RGS2P41220 211 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 CLDN10P78369 228 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 PDE4BQ07343 736 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 PPARAQ07869 468 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 KCNA1Q09470 495 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 KIAA1755Q5JYT7 1200 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 TMEM164Q5U3C3 297 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 PLEKHH3Q7Z736 793 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 SPICE1Q8N0Z3 855 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 U2AF1L4Q8WU68 220 aaKnown RBP9.12□□□□□ -0.95
SNHG1-223ENST00000545440 TRIB2Q92519 343 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 USP6NLQ92738 828 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 HELLSQ9NRZ9 838 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 HOXC10Q9NYD6 342 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 BTBD7Q9P203 1132 aa9.12□□□□□ -0.95
SNHG1-223ENST00000545440 A0A0D9SFI3 127 aa9.11□□□□□ -0.95
SNHG1-223ENST00000545440 SLC15A5A6NIM6 579 aa9.11□□□□□ -0.95
SNHG1-223ENST00000545440 ZKSCAN1P17029 563 aaPredicted RBP9.11□□□□□ -0.95
SNHG1-223ENST00000545440 ATP2B2Q01814 1243 aa9.11□□□□□ -0.95
SNHG1-223ENST00000545440 GRB14Q14449 540 aa9.11□□□□□ -0.95
SNHG1-223ENST00000545440 MAP3K21Q5TCX8 1036 aa9.11□□□□□ -0.95
SNHG1-223ENST00000545440 CCDC129Q6ZRS4 1044 aa9.11□□□□□ -0.95
SNHG1-223ENST00000545440 UBE2Q1Q7Z7E8 422 aa9.11□□□□□ -0.95
SNHG1-223ENST00000545440 SHCBP1Q8NEM2 672 aa9.11□□□□□ -0.95
SNHG1-223ENST00000545440 EMID1Q96A84 441 aaPredicted RBP9.11□□□□□ -0.95
SNHG1-223ENST00000545440 SPATC1LQ9H0A9 340 aa9.11□□□□□ -0.95
SNHG1-223ENST00000545440 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.11□□□□□ -0.951e-6■■□□□ 14.4
SNHG1-223ENST00000545440 CWC22Q9HCG8 908 aaKnown RBP9.11□□□□□ -0.95
SNHG1-223ENST00000545440 TMPRSS4Q9NRS4 437 aa9.11□□□□□ -0.95
SNHG1-223ENST00000545440 NYAP2Q9P242 653 aa9.11□□□□□ -0.95
SNHG1-223ENST00000545440 IVNS1ABPQ9Y6Y0 642 aa9.11□□□□□ -0.95
SNHG1-223ENST00000545440 CCDC171Q6TFL3 1326 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 RPTORQ8N122 1335 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 PRDM1O75626 825 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 SGPL1O95470 568 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 TTLL1O95922 423 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 HOXC6P09630 235 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 TSPY3P0CV98 308 aa9.1□□□□□ -0.95
SNHG1-223ENST00000545440 TSPY8P0CW00 308 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms