RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 SELPP16109 830 aa8.73□□□□□ -1.01
COPA-207ENST00000545284 EVX2Q03828 476 aa8.73□□□□□ -1.01
COPA-207ENST00000545284 TCF15Q12870 199 aa8.73□□□□□ -1.01
COPA-207ENST00000545284 IKBKEQ14164 716 aa8.73□□□□□ -1.01
COPA-207ENST00000545284 TRIM67Q6ZTA4 783 aa8.73□□□□□ -1.01
COPA-207ENST00000545284 SESTD1Q86VW0 696 aa8.73□□□□□ -1.01
COPA-207ENST00000545284 CHURC1Q8WUH1 139 aa8.73□□□□□ -1.01
COPA-207ENST00000545284 KIFC2Q96AC6 838 aa8.73□□□□□ -1.01
COPA-207ENST00000545284 PBXIP1Q96AQ6 731 aa8.73□□□□□ -1.01
COPA-207ENST00000545284 CRBNQ96SW2 442 aa8.73□□□□□ -1.01
COPA-207ENST00000545284 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.73□□□□□ -1.01
COPA-207ENST00000545284 ZNF287Q9HBT7 754 aa8.73□□□□□ -1.01
COPA-207ENST00000545284 ADD3Q9UEY8 706 aaKnown RBP8.73□□□□□ -1.01
COPA-207ENST00000545284 NOD1Q9Y239 953 aa8.73□□□□□ -1.01
COPA-207ENST00000545284 ZNF532Q9HCE3 1301 aa8.73□□□□□ -1.01
COPA-207ENST00000545284 H3BQ06 376 aaPredicted RBP8.72□□□□□ -1.01
COPA-207ENST00000545284 CYP2D6P10635 497 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 SLC4A3P48751 1232 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 HTRA4P83105 476 aaPredicted RBP8.72□□□□□ -1.01
COPA-207ENST00000545284 CTC1Q2NKJ3 1217 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 FAM47CQ5HY64 1035 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 IER5LQ5T953 404 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 SPRED2Q7Z698 418 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 FAM160B2Q86V87 743 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 ERC1Q8IUD2 1116 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 RNF135Q8IUD6 432 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 LCORLQ8N3X6 602 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 FBXL6Q8N531 539 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 GMCL1P1Q8NEA9 526 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 SP7Q8TDD2 431 aaPredicted RBP8.72□□□□□ -1.01
COPA-207ENST00000545284 TRERF1Q96PN7 1200 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 MPHOSPH6Q99547 160 aaKnown RBP8.72□□□□□ -1.01
COPA-207ENST00000545284 WDR11Q9BZH6 1224 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 CCDC8Q9H0W5 538 aaPredicted RBP8.72□□□□□ -1.01
COPA-207ENST00000545284 NSUN3Q9H649 340 aaKnown RBP8.72□□□□□ -1.01
COPA-207ENST00000545284 PDGFCQ9NRA1 345 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 MTUS1Q9ULD2 1270 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 GBF1Q92538 1859 aa8.72□□□□□ -1.01
COPA-207ENST00000545284 ZNF318Q5VUA4 2279 aa8.71□□□□□ -1.01
COPA-207ENST00000545284 TMEM221A6NGB7 291 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 M0R296 226 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 ANP32CO43423 234 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 MYL3P08590 195 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 STAT2P52630 851 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 DEFB103AP81534 67 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 GPNMBQ14956 572 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 EPC2Q52LR7 807 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 PPP4R3BQ5MIZ7 849 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 GIMAP6Q6P9H5 292 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 FBXO16Q8IX29 292 aaPredicted RBP8.71□□□□□ -1.02
COPA-207ENST00000545284 FAM9BQ8IZU0 186 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 NUP88Q99567 741 aaPredicted RBP8.71□□□□□ -1.02
COPA-207ENST00000545284 RNF146Q9NTX7 359 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 TLR7Q9NYK1 1049 aaKnown RBP8.71□□□□□ -1.02
COPA-207ENST00000545284 CYP39A1Q9NYL5 469 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 ARPP21Q9UBL0 812 aaPredicted RBP8.71□□□□□ -1.02
COPA-207ENST00000545284 CLIP2Q9UDT6 1046 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 MUTYHQ9UIF7 546 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 ZBED9Q6R2W3 1325 aa8.71□□□□□ -1.02
COPA-207ENST00000545284 BRWD1Q9NSI6 2320 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 B4DLN1 442 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 TTLL1O95922 423 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 RB1P06400 928 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 BMP3P12645 472 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 LTBRP36941 435 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 MRPL12P52815 198 aaKnown RBP8.7□□□□□ -1.02
COPA-207ENST00000545284 RARSP54136 660 aaKnown RBP8.7□□□□□ -1.02
COPA-207ENST00000545284 SMAD4Q13485 552 aaKnown RBP8.7□□□□□ -1.02
COPA-207ENST00000545284 UBE3CQ15386 1083 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 PTGISQ16647 500 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 SBK1Q52WX2 424 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 CTR9Q6PD62 1173 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 LRRC8DQ7L1W4 858 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 EEPD1Q7L9B9 569 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 LRRC47Q8N1G4 583 aaKnown RBP8.7□□□□□ -1.02
COPA-207ENST00000545284 OR6J1Q8NGC5 347 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 STAG1Q8WVM7 1258 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 ATOH1Q92858 354 aaPredicted RBP8.7□□□□□ -1.02
COPA-207ENST00000545284 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.7□□□□□ -1.021e-12■■■■□ 20.5
COPA-207ENST00000545284 LMAN2LQ9H0V9 348 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 ARMT1Q9H993 441 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 MKNK2Q9HBH9 465 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 HOMER2Q9NSB8 354 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 CLDND1Q9NY35 253 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 PNMA2Q9UL42 364 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 EMSYQ7Z589 1322 aa8.7□□□□□ -1.02
COPA-207ENST00000545284 PARP14Q460N5 1801 aa8.69□□□□□ -1.02
COPA-207ENST00000545284 IGKV6D-41A0A0C4DH26 115 aa8.69□□□□□ -1.02
COPA-207ENST00000545284 MBTPS2O43462 519 aa8.69□□□□□ -1.02
COPA-207ENST00000545284 PRKAB2O43741 272 aa8.69□□□□□ -1.02
COPA-207ENST00000545284 NBNO60934 754 aa8.69□□□□□ -1.02
COPA-207ENST00000545284 MBD4O95243 580 aa8.69□□□□□ -1.02
COPA-207ENST00000545284 AMHP03971 560 aa8.69□□□□□ -1.02
COPA-207ENST00000545284 TRIM27P14373 513 aa8.69□□□□□ -1.02
COPA-207ENST00000545284 RASA1P20936 1047 aa8.69□□□□□ -1.02
COPA-207ENST00000545284 ADD2P35612 726 aa8.69□□□□□ -1.02
COPA-207ENST00000545284 ZXDAP98168 799 aa8.69□□□□□ -1.02
COPA-207ENST00000545284 SIGLEC14Q08ET2 396 aa8.69□□□□□ -1.02
COPA-207ENST00000545284 GPM6BQ13491 265 aa8.69□□□□□ -1.02
COPA-207ENST00000545284 PPP2R5BQ15173 497 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms