RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 VAT1LQ9HCJ6 419 aa19.72■□□□□ 0.75
HOXD8-204ENST00000544999 ATP11BQ9Y2G3 1177 aa19.72■□□□□ 0.75
HOXD8-204ENST00000544999 MYADML2A6NDP7 307 aa19.71■□□□□ 0.75
HOXD8-204ENST00000544999 CDC45O75419 566 aa19.71■□□□□ 0.75
HOXD8-204ENST00000544999 MAGEA10P43363 369 aaPredicted RBP19.71■□□□□ 0.75
HOXD8-204ENST00000544999 FXR1P51114 621 aaKnown RBP eCLIP19.71■□□□□ 0.75
HOXD8-204ENST00000544999 ACLYP53396 1101 aa19.71■□□□□ 0.75
HOXD8-204ENST00000544999 KCNA10Q16322 511 aa19.71■□□□□ 0.75
HOXD8-204ENST00000544999 TRIM60Q495X7 471 aa19.71■□□□□ 0.75
HOXD8-204ENST00000544999 IQSEC1Q6DN90 963 aa19.71■□□□□ 0.75
HOXD8-204ENST00000544999 TAPT1Q6NXT6 567 aa19.71■□□□□ 0.75
HOXD8-204ENST00000544999 PCSK9Q8NBP7 692 aaKnown RBP19.71■□□□□ 0.75
HOXD8-204ENST00000544999 NUP133Q8WUM0 1156 aa19.71■□□□□ 0.75
HOXD8-204ENST00000544999 MPHOSPH6Q99547 160 aaKnown RBP19.71■□□□□ 0.75
HOXD8-204ENST00000544999 GNEQ9Y223 722 aaKnown RBP19.71■□□□□ 0.75
HOXD8-204ENST00000544999 MRPL11Q9Y3B7 192 aaKnown RBP19.71■□□□□ 0.75
HOXD8-204ENST00000544999 DDX49Q9Y6V7 483 aaKnown RBP19.71■□□□□ 0.75
HOXD8-204ENST00000544999 MCM5P33992 734 aa19.7■□□□□ 0.74
HOXD8-204ENST00000544999 TROAPQ12815 778 aa19.7■□□□□ 0.74
HOXD8-204ENST00000544999 EEPD1Q7L9B9 569 aa19.7■□□□□ 0.74
HOXD8-204ENST00000544999 CATIPQ7Z7H3 387 aa19.7■□□□□ 0.74
HOXD8-204ENST00000544999 MCF2L2Q86YR7 1114 aa19.7■□□□□ 0.74
HOXD8-204ENST00000544999 AMNQ9BXJ7 453 aa19.7■□□□□ 0.74
HOXD8-204ENST00000544999 Q9Y3F1 56 aa19.7■□□□□ 0.74
HOXD8-204ENST00000544999 B4DLN1 442 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 ZBTB5O15062 677 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 PRC1O43663 620 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 SMPD1P17405 629 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 EDNRBP24530 442 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 MRPL12P52815 198 aaKnown RBP19.69■□□□□ 0.74
HOXD8-204ENST00000544999 RNF20Q5VTR2 975 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 NOL8Q76FK4 1167 aaKnown RBP19.69■□□□□ 0.74
HOXD8-204ENST00000544999 TLK2Q86UE8 772 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 TMEM87BQ96K49 555 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 MAP3K14Q99558 947 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 RIOX1Q9H6W3 641 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 LY9Q9HBG7 655 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 STARD7Q9NQZ5 370 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 PDGFCQ9NRA1 345 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 PRKAG2Q9UGJ0 569 aa19.69■□□□□ 0.74
HOXD8-204ENST00000544999 CTAGE5O15320 804 aa19.68■□□□□ 0.74
HOXD8-204ENST00000544999 ASGR1P07306 291 aa19.68■□□□□ 0.74
HOXD8-204ENST00000544999 IRX5P78411 483 aaPredicted RBP19.68■□□□□ 0.74
HOXD8-204ENST00000544999 GNASQ5JWF2 1037 aa19.68■□□□□ 0.74
HOXD8-204ENST00000544999 TMTC2Q8N394 836 aa19.68■□□□□ 0.74
HOXD8-204ENST00000544999 GLT1D1Q96MS3 346 aa19.68■□□□□ 0.74
HOXD8-204ENST00000544999 ELP1O95163 1332 aa19.68■□□□□ 0.74
HOXD8-204ENST00000544999 RBM47A0AV96 593 aaKnown RBP19.67■□□□□ 0.74
HOXD8-204ENST00000544999 DDAH1O94760 285 aa19.67■□□□□ 0.74
HOXD8-204ENST00000544999 PDE4DQ08499 809 aa19.67■□□□□ 0.74
HOXD8-204ENST00000544999 SLC35G1Q2M3R5 365 aa19.67■□□□□ 0.74
HOXD8-204ENST00000544999 ZNF654Q8IZM8 581 aa19.67■□□□□ 0.74
HOXD8-204ENST00000544999 SYTL5Q8TDW5 730 aaPredicted RBP19.67■□□□□ 0.74
HOXD8-204ENST00000544999 TBC1D5Q92609 795 aa19.67■□□□□ 0.74
HOXD8-204ENST00000544999 AP5M1Q9H0R1 490 aa19.67■□□□□ 0.74
HOXD8-204ENST00000544999 PDLIM7Q9NR12 457 aa19.67■□□□□ 0.74
HOXD8-204ENST00000544999 LTBP2Q14767 1821 aa19.67■□□□□ 0.74
HOXD8-204ENST00000544999 SH2B2O14492 632 aaPredicted RBP19.66■□□□□ 0.74
HOXD8-204ENST00000544999 DYNC1LI2O43237 492 aaPredicted RBP19.66■□□□□ 0.74
HOXD8-204ENST00000544999 MDM2Q00987 491 aaPredicted RBP19.66■□□□□ 0.74
HOXD8-204ENST00000544999 TLE2Q04725 743 aa19.66■□□□□ 0.74
HOXD8-204ENST00000544999 TRAF1Q13077 416 aa19.66■□□□□ 0.74
HOXD8-204ENST00000544999 DUSP28Q4G0W2 176 aa19.66■□□□□ 0.74
HOXD8-204ENST00000544999 LBHD1Q9BQE6 289 aaPredicted RBP19.66■□□□□ 0.74
HOXD8-204ENST00000544999 UBE2OQ9C0C9 1292 aaKnown RBP19.66■□□□□ 0.74
HOXD8-204ENST00000544999 CYTH3O43739 400 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 ZEB2O60315 1214 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 PPP1R11O60927 126 aaPredicted RBP19.65■□□□□ 0.74
HOXD8-204ENST00000544999 LIFRP42702 1097 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 BEX3Q00994 111 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 GHRHRQ02643 423 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 FSCN1Q16658 493 aaKnown RBP19.65■□□□□ 0.74
HOXD8-204ENST00000544999 NFXL1Q6ZNB6 911 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 ANKRD33Q7Z3H0 272 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 HOMER1Q86YM7 354 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 SAMD3Q8N6K7 520 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 CTCFLQ8NI51 663 aaPredicted RBP19.65■□□□□ 0.74
HOXD8-204ENST00000544999 TOX2Q96NM4 488 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 TAAR1Q96RJ0 339 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 PIGSQ96S52 555 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 WDR11Q9BZH6 1224 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 PRDM5Q9NQX1 630 aaPredicted RBP19.65■□□□□ 0.74
HOXD8-204ENST00000544999 GPHNQ9NQX3 736 aaPredicted RBP19.65■□□□□ 0.74
HOXD8-204ENST00000544999 MAP3K20Q9NYL2 800 aaKnown RBP19.65■□□□□ 0.74
HOXD8-204ENST00000544999 COL20A1Q9P218 1284 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 PCDH10Q9P2E7 1040 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 PCDHA1Q9Y5I3 950 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 TRIOBPQ9H2D6 2365 aa19.65■□□□□ 0.74
HOXD8-204ENST00000544999 A0A0U1RQG5 324 aaPredicted RBP19.64■□□□□ 0.73
HOXD8-204ENST00000544999 CCDC69A6NI79 296 aa19.64■□□□□ 0.73
HOXD8-204ENST00000544999 OPLAHO14841 1288 aa19.64■□□□□ 0.73
HOXD8-204ENST00000544999 CFBP00751 764 aa19.64■□□□□ 0.73
HOXD8-204ENST00000544999 CLTBP09497 229 aa19.64■□□□□ 0.73
HOXD8-204ENST00000544999 KIF5BP33176 963 aa19.64■□□□□ 0.73
HOXD8-204ENST00000544999 HSD17B4P51659 736 aa19.64■□□□□ 0.73
HOXD8-204ENST00000544999 COL9A3Q14050 684 aaPredicted RBP19.64■□□□□ 0.73
HOXD8-204ENST00000544999 TSGA10IPQ3SY00 556 aa19.64■□□□□ 0.73
HOXD8-204ENST00000544999 TMEM63BQ5T3F8 832 aa19.64■□□□□ 0.73
HOXD8-204ENST00000544999 TDHQ8IZJ6 230 aa19.64■□□□□ 0.73
HOXD8-204ENST00000544999 NSUN6Q8TEA1 469 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms