RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 TMEM132BQ14DG7 1078 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 MTFR1Q15390 333 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 KIAA1211Q6ZU35 1233 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 DPP9Q86TI2 863 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 FAM160B2Q86V87 743 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 IQCA1Q86XH1 822 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 NCAPG2Q86XI2 1143 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 CHURC1Q8WUH1 139 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 GMCL1Q96IK5 515 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 NUP88Q99567 741 aaPredicted RBP8.67□□□□□ -1.02
CPSF7-224ENST00000544990 APBA2Q99767 749 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 KRT23Q9C075 422 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 CNNM2Q9H8M5 875 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 FBXO28Q9NVF7 368 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 EVA1BQ9NVM1 165 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 ZNFX1Q9P2E3 1918 aaKnown RBP8.67□□□□□ -1.02
CPSF7-224ENST00000544990 TACC3Q9Y6A5 838 aa8.67□□□□□ -1.02
CPSF7-224ENST00000544990 RPTORQ8N122 1335 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 TMEM232C9JQI7 657 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 SGSM2O43147 1006 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 NMT2O60551 498 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 PLA2G6O60733 806 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 F12P00748 615 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-224ENST00000544990 FCER1AP12319 257 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 ZKSCAN1P17029 563 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-224ENST00000544990 EN2P19622 333 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-224ENST00000544990 MCCP23508 829 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 NOVP48745 357 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 STAT2P52630 851 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 KCNH2Q12809 1159 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 TRDNQ13061 729 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 GRB14Q14449 540 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 BMP2KLQ5H9B9 411 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 RCSD1Q6JBY9 416 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 DGKHQ86XP1 1220 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 RIOX2Q8IUF8 465 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 TBC1D10CQ8IV04 446 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 ABRAQ8N0Z2 381 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 ZNF592Q92610 1267 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 USP6NLQ92738 828 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 KIFC2Q96AC6 838 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 TEX13BQ9BXU2 312 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 SLC6A16Q9GZN6 736 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 MAP10Q9P2G4 905 aa8.66□□□□□ -1.02
CPSF7-224ENST00000544990 PDE4DIPQ5VU43 2346 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 ZBBXA8MT70 800 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 B4E1Z4 1266 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 ATP2A1O14983 1001 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 SGPL1O95470 568 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 HOXC6P09630 235 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 ADORA2AP29274 412 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 GJA8P48165 433 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 OAZ1P54368 228 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 NR1H3Q13133 447 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 KCTD2Q14681 263 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 CCDC96Q2M329 555 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 MFSD14CQ5VZR4 134 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 ERICH6BQ5W0A0 696 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 CASC1Q6TDU7 716 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 KCTD1Q719H9 257 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 CPXCR1Q8N123 301 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 U2AF1L4Q8WU68 220 aaKnown RBP8.65□□□□□ -1.02
CPSF7-224ENST00000544990 DCAF4Q8WV16 495 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 TRIB2Q92519 343 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.023e-7■■■■□ 21.6
CPSF7-224ENST00000544990 MMP19Q99542 508 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 TMEM47Q9BQJ4 181 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 UNC93B1Q9H1C4 597 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 IL25Q9H293 177 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 ZNF214Q9UL59 606 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-224ENST00000544990 MTMR7Q9Y216 660 aa8.65□□□□□ -1.02
CPSF7-224ENST00000544990 NEDD4P46934 1319 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 TFRCP02786 760 aaKnown RBP8.64□□□□□ -1.03
CPSF7-224ENST00000544990 PTH1RQ03431 593 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 PTK2Q05397 1052 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 TJAP1Q5JTD0 557 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 SNRNP48Q6IEG0 339 aaKnown RBP8.64□□□□□ -1.03
CPSF7-224ENST00000544990 REPS2Q8NFH8 660 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 NPLOC4Q8TAT6 608 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 MAP4K1Q92918 833 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 CHMP4CQ96CF2 233 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 DEFB118Q96PH6 123 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 ZSCAN10Q96SZ4 725 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-224ENST00000544990 ZKSCAN3Q9BRR0 538 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 UBAC1Q9BSL1 405 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.64□□□□□ -1.037e-8■■■■□ 20.4
CPSF7-224ENST00000544990 KAT14Q9H8E8 782 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 SLC38A10Q9HBR0 1119 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 PAK6Q9NQU5 681 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-224ENST00000544990 ZSWIM5Q9P217 1185 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 FBXO40Q9UH90 709 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 ZNF236Q9UL36 1845 aa8.64□□□□□ -1.03
CPSF7-224ENST00000544990 ERICH2A1L162 156 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 TLL1O43897 1013 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 CYP21A2P08686 494 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 CACNB2Q08289 660 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-224ENST00000544990 TRIM32Q13049 653 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 CCL14Q16627 93 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 TKFCQ3LXA3 575 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 MAP3K21Q5TCX8 1036 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms